RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 GARTP22102 1010 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 TMPRSS15P98073 1019 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 BMPR2Q13873 1038 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 PSMD6Q15008 389 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 CIAPIN1Q6FI81 312 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 NPNTQ6UXI9 565 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 SCUBE1Q8IWY4 988 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 SAMD3Q8N6K7 520 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 ARFGAP1Q8N6T3 406 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 PPM1NQ8N819 430 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 RMDN3Q96TC7 470 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 TRIM56Q9BRZ2 755 aaKnown RBP21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 IQCGQ9H095 443 aaKnown RBP21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 ANKEF1Q9NU02 776 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 TRIM49D1C9J1S8 452 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 RNF8O76064 485 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 TOP3BO95985 862 aaKnown RBP21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 GSTT1P30711 240 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 HIRAP54198 1017 aaPredicted RBP21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 ZNF200P98182 395 aaPredicted RBP21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 BST1Q10588 318 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 UBAP2LQ14157 1087 aaKnown RBP21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 KRT72Q14CN4 511 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 GPAT2Q6NUI2 795 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 SCARA5Q6ZMJ2 495 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 ZCCHC23Q6ZST2 131 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 JOSD2Q8TAC2 188 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 TIPINQ9BVW5 301 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 SLC7A8Q9UHI5 535 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 FEM1BQ9UK73 627 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 STRIP2Q9ULQ0 834 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 SCN9AQ15858 1988 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 UGT1A9O60656 530 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 WEE2P0C1S8 567 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 PSMA2P25787 234 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 MTERF2Q49AM1 385 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 C1orf146Q5VVC0 180 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 WDTC1Q8N5D0 677 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 ALKBH8Q96BT7 664 aaKnown RBP21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 C20orf27Q9GZN8 174 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 TMEM39BQ9GZU3 492 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 UGT1A7Q9HAW7 530 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 UGT1A10Q9HAW8 530 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 UGT1A8Q9HAW9 530 aa21.1■□□□□ 0.97
CACNA1A-243ENST00000637616 IQANK1A0A1B0GTG1 560 aa21.09■□□□□ 0.97
CACNA1A-243ENST00000637616 COPEO14579 308 aa21.09■□□□□ 0.97
CACNA1A-243ENST00000637616 MAP3K6O95382 1288 aa21.09■□□□□ 0.97
CACNA1A-243ENST00000637616 AQP5P55064 265 aa21.09■□□□□ 0.97
CACNA1A-243ENST00000637616 FAXCQ5TGI0 409 aa21.09■□□□□ 0.97
CACNA1A-243ENST00000637616 PCGF5Q86SE9 256 aa21.09■□□□□ 0.97
CACNA1A-243ENST00000637616 FAM160B2Q86V87 743 aa21.09■□□□□ 0.97
CACNA1A-243ENST00000637616 ULK2Q8IYT8 1036 aa21.09■□□□□ 0.97
CACNA1A-243ENST00000637616 SMC1BQ8NDV3 1235 aa21.09■□□□□ 0.97
CACNA1A-243ENST00000637616 TARS2Q9BW92 718 aaKnown RBP21.09■□□□□ 0.97
CACNA1A-243ENST00000637616 MRIQ9BWK5 157 aa21.09■□□□□ 0.97
CACNA1A-243ENST00000637616 PHACTR1Q9C0D0 580 aa21.09■□□□□ 0.97
CACNA1A-243ENST00000637616 PPCSQ9HAB8 311 aa21.09■□□□□ 0.97
CACNA1A-243ENST00000637616 SLX4Q8IY92 1834 aa21.09■□□□□ 0.97
CACNA1A-243ENST00000637616 CXorf49A8MYA2 514 aaPredicted RBP21.09■□□□□ 0.97
CACNA1A-243ENST00000637616 SORBS2O94875 1100 aaKnown RBP21.09■□□□□ 0.97
CACNA1A-243ENST00000637616 DLGAP5Q15398 846 aa21.09■□□□□ 0.97
CACNA1A-243ENST00000637616 SH2D5Q6ZV89 423 aa21.09■□□□□ 0.97
CACNA1A-243ENST00000637616 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.09■□□□□ 0.97
CACNA1A-243ENST00000637616 HSPH1Q92598 858 aa21.09■□□□□ 0.97
CACNA1A-243ENST00000637616 RILPQ96NA2 401 aa21.09■□□□□ 0.97
CACNA1A-243ENST00000637616 SLC9A2Q9UBY0 812 aa21.09■□□□□ 0.97
CACNA1A-243ENST00000637616 PRR5-ARHGAP8B1AHC4 643 aa21.08■□□□□ 0.97
CACNA1A-243ENST00000637616 GSTA2P09210 222 aa21.08■□□□□ 0.97
CACNA1A-243ENST00000637616 ALDH1B1P30837 517 aa21.08■□□□□ 0.97
CACNA1A-243ENST00000637616 RTP1P59025 263 aa21.08■□□□□ 0.97
CACNA1A-243ENST00000637616 ARHGAP8P85298 464 aa21.08■□□□□ 0.97
CACNA1A-243ENST00000637616 NCOA4Q13772 614 aa21.08■□□□□ 0.97
CACNA1A-243ENST00000637616 CFAP157Q5JU67 520 aa21.08■□□□□ 0.97
CACNA1A-243ENST00000637616 ISLR2Q6UXK2 745 aa21.08■□□□□ 0.97
CACNA1A-243ENST00000637616 RFX6Q8HWS3 928 aa21.08■□□□□ 0.97
CACNA1A-243ENST00000637616 TFAP2BQ92481 460 aa21.08■□□□□ 0.97
CACNA1A-243ENST00000637616 EBF4Q9BQW3 602 aa21.08■□□□□ 0.97
CACNA1A-243ENST00000637616 SHCBP1LQ9BZQ2 653 aa21.08■□□□□ 0.97
CACNA1A-243ENST00000637616 CNTN3Q9P232 1028 aa21.08■□□□□ 0.97
CACNA1A-243ENST00000637616 HERC5Q9UII4 1024 aaKnown RBP21.08■□□□□ 0.97
CACNA1A-243ENST00000637616 PTGER2P43116 358 aa21.08■□□□□ 0.97
CACNA1A-243ENST00000637616 ORC1Q13415 861 aa21.08■□□□□ 0.97
CACNA1A-243ENST00000637616 CHI3L2Q15782 390 aa21.08■□□□□ 0.97
CACNA1A-243ENST00000637616 RAPH1Q70E73 1250 aa21.08■□□□□ 0.97
CACNA1A-243ENST00000637616 TMPRSS6Q8IU80 811 aa21.08■□□□□ 0.97
CACNA1A-243ENST00000637616 GSTCDQ8NEC7 633 aa21.08■□□□□ 0.97
CACNA1A-243ENST00000637616 USP6NLQ92738 828 aa21.08■□□□□ 0.97
CACNA1A-243ENST00000637616 CALN1Q9BXU9 219 aa21.08■□□□□ 0.97
CACNA1A-243ENST00000637616 ASCC2Q9H1I8 757 aaPredicted RBP21.08■□□□□ 0.97
CACNA1A-243ENST00000637616 SMYD3Q9H7B4 428 aa21.08■□□□□ 0.97
CACNA1A-243ENST00000637616 PCDHA10Q9Y5I2 948 aa21.08■□□□□ 0.97
CACNA1A-243ENST00000637616 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.08■□□□□ 0.96
CACNA1A-243ENST00000637616 TCRBV5S1A1TA0A578 114 aa21.08■□□□□ 0.96
CACNA1A-243ENST00000637616 RNASEH1O60930 286 aaKnown RBP21.08■□□□□ 0.96
CACNA1A-243ENST00000637616 TGDSO95455 350 aa21.08■□□□□ 0.96
CACNA1A-243ENST00000637616 JAK3P52333 1124 aa21.08■□□□□ 0.96
CACNA1A-243ENST00000637616 EIF3EP60228 445 aaKnown RBP21.08■□□□□ 0.96
CACNA1A-243ENST00000637616 LAMB3Q13751 1172 aa21.08■□□□□ 0.96
CACNA1A-243ENST00000637616 HIPK4Q8NE63 616 aa21.08■□□□□ 0.96
CACNA1A-243ENST00000637616 ZFAND2BQ8WV99 257 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms