RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 MAGED2Q9UNF1 606 aaPredicted RBP18.23■□□□□ 0.51
CLN6-218ENST00000637223 FAM50BQ9Y247 325 aa18.23■□□□□ 0.51
CLN6-218ENST00000637223 CLUHO75153 1309 aa18.23■□□□□ 0.51
CLN6-218ENST00000637223 SLC38A8A6NNN8 435 aa18.22■□□□□ 0.51
CLN6-218ENST00000637223 BEST1O76090 585 aa18.22■□□□□ 0.51
CLN6-218ENST00000637223 MYL4P12829 197 aa18.22■□□□□ 0.51
CLN6-218ENST00000637223 SP100P23497 879 aaPredicted RBP18.22■□□□□ 0.51
CLN6-218ENST00000637223 MAP3K7CLP57077 242 aa18.22■□□□□ 0.51
CLN6-218ENST00000637223 C8orf48Q96LL4 319 aa18.22■□□□□ 0.51
CLN6-218ENST00000637223 ZSWIM1Q9BR11 485 aa18.22■□□□□ 0.51
CLN6-218ENST00000637223 STK33Q9BYT3 514 aa18.22■□□□□ 0.51
CLN6-218ENST00000637223 ZNF334Q9HCZ1 680 aaPredicted RBP18.22■□□□□ 0.51
CLN6-218ENST00000637223 DMAP1Q9NPF5 467 aaPredicted RBP18.22■□□□□ 0.51
CLN6-218ENST00000637223 ASAH2Q9NR71 780 aa18.22■□□□□ 0.51
CLN6-218ENST00000637223 TSPAN16Q9UKR8 245 aa18.22■□□□□ 0.51
CLN6-218ENST00000637223 KIAA1257Q9ULG3 409 aa18.22■□□□□ 0.51
CLN6-218ENST00000637223 ASB3Q9Y575 518 aa18.22■□□□□ 0.51
CLN6-218ENST00000637223 O00370 1275 aa18.21■□□□□ 0.51
CLN6-218ENST00000637223 CYP26A1O43174 497 aa18.21■□□□□ 0.51
CLN6-218ENST00000637223 FSHRP23945 695 aa18.21■□□□□ 0.51
CLN6-218ENST00000637223 SLC5A9Q2M3M2 681 aa18.21■□□□□ 0.51
CLN6-218ENST00000637223 CLEC20AQ6ZU45 233 aa18.21■□□□□ 0.51
CLN6-218ENST00000637223 PDZD4Q76G19 769 aaPredicted RBP18.21■□□□□ 0.51
CLN6-218ENST00000637223 GET4Q7L5D6 327 aaPredicted RBP18.21■□□□□ 0.51
CLN6-218ENST00000637223 TMC8Q8IU68 726 aa18.21■□□□□ 0.51
CLN6-218ENST00000637223 GPIHBP1Q8IV16 184 aa18.21■□□□□ 0.51
CLN6-218ENST00000637223 ZMIZ2Q8NF64 920 aa18.21■□□□□ 0.51
CLN6-218ENST00000637223 ITFG1Q8TB96 612 aa18.21■□□□□ 0.51
CLN6-218ENST00000637223 SPATA17Q96L03 361 aa18.21■□□□□ 0.51
CLN6-218ENST00000637223 LRRC3Q9BY71 257 aa18.21■□□□□ 0.51
CLN6-218ENST00000637223 XPO4Q9C0E2 1151 aaKnown RBP18.21■□□□□ 0.51
CLN6-218ENST00000637223 A0A1W2PQC6 194 aa18.2■□□□□ 0.5
CLN6-218ENST00000637223 F8VZ95 297 aa18.2■□□□□ 0.5
CLN6-218ENST00000637223 NRG2O14511 850 aaPredicted RBP18.2■□□□□ 0.5
CLN6-218ENST00000637223 CSH1P0DML2 217 aa18.2■□□□□ 0.5
CLN6-218ENST00000637223 CSH2P0DML3 217 aa18.2■□□□□ 0.5
CLN6-218ENST00000637223 HMGA1P17096 107 aaKnown RBP18.2■□□□□ 0.5
CLN6-218ENST00000637223 GJA1P17302 382 aa18.2■□□□□ 0.5
CLN6-218ENST00000637223 NPR3P17342 541 aa18.2■□□□□ 0.5
CLN6-218ENST00000637223 GNA15P30679 374 aa18.2■□□□□ 0.5
CLN6-218ENST00000637223 CCR2P41597 374 aa18.2■□□□□ 0.5
CLN6-218ENST00000637223 PLCB2Q00722 1185 aa18.2■□□□□ 0.5
CLN6-218ENST00000637223 IFRD2Q12894 506 aaPredicted RBP18.2■□□□□ 0.5
CLN6-218ENST00000637223 CYP4A22Q5TCH4 519 aa18.2■□□□□ 0.5
CLN6-218ENST00000637223 DENND5BQ6ZUT9 1274 aa18.2■□□□□ 0.5
CLN6-218ENST00000637223 TTC30AQ86WT1 665 aa18.2■□□□□ 0.5
CLN6-218ENST00000637223 FAM71AQ8IYT1 594 aa18.2■□□□□ 0.5
CLN6-218ENST00000637223 UBA3Q8TBC4 463 aa18.2■□□□□ 0.5
CLN6-218ENST00000637223 ING5Q8WYH8 240 aa18.2■□□□□ 0.5
CLN6-218ENST00000637223 TCEAL4Q96EI5 215 aa18.2■□□□□ 0.5
CLN6-218ENST00000637223 SPAG5Q96R06 1193 aa18.2■□□□□ 0.5
CLN6-218ENST00000637223 PHF7Q9BWX1 381 aaPredicted RBP18.2■□□□□ 0.5
CLN6-218ENST00000637223 DUSP16Q9BY84 665 aa18.2■□□□□ 0.5
CLN6-218ENST00000637223 CSNK1G1Q9HCP0 422 aa18.2■□□□□ 0.5
CLN6-218ENST00000637223 HESX1Q9UBX0 185 aa18.2■□□□□ 0.5
CLN6-218ENST00000637223 MRPS23Q9Y3D9 190 aaKnown RBP18.2■□□□□ 0.5
CLN6-218ENST00000637223 THAP12O43422 761 aa18.19■□□□□ 0.5
CLN6-218ENST00000637223 MICAL2O94851 1124 aa18.19■□□□□ 0.5
CLN6-218ENST00000637223 CLCN1P35523 988 aa18.19■□□□□ 0.5
CLN6-218ENST00000637223 EPHA5P54756 1037 aa18.19■□□□□ 0.5
CLN6-218ENST00000637223 USP46P62068 366 aa18.19■□□□□ 0.5
CLN6-218ENST00000637223 ZP2Q05996 745 aa18.19■□□□□ 0.5
CLN6-218ENST00000637223 CNGA2Q16280 664 aa18.19■□□□□ 0.5
CLN6-218ENST00000637223 PRSS36Q5K4E3 855 aa18.19■□□□□ 0.5
CLN6-218ENST00000637223 LCLAT1Q6UWP7 414 aa18.19■□□□□ 0.5
CLN6-218ENST00000637223 CACNA2D4Q7Z3S7 1137 aa18.19■□□□□ 0.5
CLN6-218ENST00000637223 SLC47A2Q86VL8 602 aa18.19■□□□□ 0.5
CLN6-218ENST00000637223 ANKRD52Q8NB46 1076 aa18.19■□□□□ 0.5
CLN6-218ENST00000637223 RPGRIP1Q96KN7 1286 aa18.19■□□□□ 0.5
CLN6-218ENST00000637223 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.19■□□□□ 0.5
CLN6-218ENST00000637223 DAAM1Q9Y4D1 1078 aa18.19■□□□□ 0.5
CLN6-218ENST00000637223 MTCL1Q9Y4B5 1905 aaKnown RBP18.19■□□□□ 0.5
CLN6-218ENST00000637223 A0A1W2PRU2 124 aa18.18■□□□□ 0.5
CLN6-218ENST00000637223 M0QYV0 167 aa18.18■□□□□ 0.5
CLN6-218ENST00000637223 CBFA2T2O43439 604 aa18.18■□□□□ 0.5
CLN6-218ENST00000637223 GFPT2O94808 682 aa18.18■□□□□ 0.5
CLN6-218ENST00000637223 TPM3P06753 285 aa18.18■□□□□ 0.5
CLN6-218ENST00000637223 CEBPBP17676 345 aa18.18■□□□□ 0.5
CLN6-218ENST00000637223 GABRR2P28476 465 aa18.18■□□□□ 0.5
CLN6-218ENST00000637223 GBP2P32456 591 aaPredicted RBP18.18■□□□□ 0.5
CLN6-218ENST00000637223 PBX1P40424 430 aa18.18■□□□□ 0.5
CLN6-218ENST00000637223 SLC5A3P53794 718 aa18.18■□□□□ 0.5
CLN6-218ENST00000637223 BCAT1P54687 386 aa18.18■□□□□ 0.5
CLN6-218ENST00000637223 JAM2P57087 298 aa18.18■□□□□ 0.5
CLN6-218ENST00000637223 PTK2Q05397 1052 aa18.18■□□□□ 0.5
CLN6-218ENST00000637223 PDE4CQ08493 712 aa18.18■□□□□ 0.5
CLN6-218ENST00000637223 GPRIN1Q7Z2K8 1008 aa18.18■□□□□ 0.5
CLN6-218ENST00000637223 NUP93Q8N1F7 819 aa18.18■□□□□ 0.5
CLN6-218ENST00000637223 LEMD2Q8NC56 503 aa18.18■□□□□ 0.5
CLN6-218ENST00000637223 CEP295NLQ96MC4 621 aa18.18■□□□□ 0.5
CLN6-218ENST00000637223 IL21Q9HBE4 155 aa18.18■□□□□ 0.5
CLN6-218ENST00000637223 AVENQ9NQS1 362 aaPredicted RBP18.18■□□□□ 0.5
CLN6-218ENST00000637223 PRKAG3Q9UGI9 489 aa18.18■□□□□ 0.5
CLN6-218ENST00000637223 ZNF318Q5VUA4 2279 aa18.18■□□□□ 0.5
CLN6-218ENST00000637223 C19orf67A6NJJ6 358 aa18.17■□□□□ 0.5
CLN6-218ENST00000637223 HHLA1C9JL84 531 aa18.17■□□□□ 0.5
CLN6-218ENST00000637223 TULP2O00295 520 aa18.17■□□□□ 0.5
CLN6-218ENST00000637223 ZNF197O14709 1029 aa18.17■□□□□ 0.5
CLN6-218ENST00000637223 TNFRSF10BO14763 440 aa18.17■□□□□ 0.5
CLN6-218ENST00000637223 MED7O43513 233 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms