RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 ABRAQ8N0Z2 381 aa16.26■□□□□ 0.19
CACNA1A-235ENST00000637004 SLC35B2Q8TB61 432 aa16.26■□□□□ 0.19
CACNA1A-235ENST00000637004 HAUS1Q96CS2 278 aa16.26■□□□□ 0.19
CACNA1A-235ENST00000637004 C17orf75Q9HAS0 396 aa16.26■□□□□ 0.19
CACNA1A-235ENST00000637004 S100A14Q9HCY8 104 aa16.26■□□□□ 0.19
CACNA1A-235ENST00000637004 GINM1Q9NU53 330 aa16.26■□□□□ 0.19
CACNA1A-235ENST00000637004 GALNT8Q9NY28 637 aa16.26■□□□□ 0.19
CACNA1A-235ENST00000637004 LOXHD1Q8IVV2 1947 aa16.26■□□□□ 0.19
CACNA1A-235ENST00000637004 USP1O94782 785 aa16.26■□□□□ 0.19
CACNA1A-235ENST00000637004 IMPDH2P12268 514 aa16.26■□□□□ 0.19
CACNA1A-235ENST00000637004 UQCRBP14927 111 aa16.26■□□□□ 0.19
CACNA1A-235ENST00000637004 RPL26P61254 145 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-235ENST00000637004 APOBEC3HQ6NTF7 200 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-235ENST00000637004 RAPH1Q70E73 1250 aa16.26■□□□□ 0.19
CACNA1A-235ENST00000637004 PASD1Q8IV76 773 aa16.26■□□□□ 0.19
CACNA1A-235ENST00000637004 MAP4K3Q8IVH8 894 aa16.26■□□□□ 0.19
CACNA1A-235ENST00000637004 ZFPM1Q8IX07 1006 aa16.26■□□□□ 0.19
CACNA1A-235ENST00000637004 CERS5Q8N5B7 392 aa16.26■□□□□ 0.19
CACNA1A-235ENST00000637004 MIPOL1Q8TD10 442 aa16.26■□□□□ 0.19
CACNA1A-235ENST00000637004 LZICQ8WZA0 190 aa16.26■□□□□ 0.19
CACNA1A-235ENST00000637004 SERAC1Q96JX3 654 aa16.26■□□□□ 0.19
CACNA1A-235ENST00000637004 DDX56Q9NY93 547 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-235ENST00000637004 IVNS1ABPQ9Y6Y0 642 aa16.26■□□□□ 0.19
CACNA1A-235ENST00000637004 COPEO14579 308 aa16.25■□□□□ 0.19
CACNA1A-235ENST00000637004 ATP9BO43861 1147 aa16.25■□□□□ 0.19
CACNA1A-235ENST00000637004 HARSP12081 509 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-235ENST00000637004 STIP1P31948 543 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-235ENST00000637004 ZNF200P98182 395 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-235ENST00000637004 HIC1Q14526 733 aa16.25■□□□□ 0.19
CACNA1A-235ENST00000637004 ABCB5Q2M3G0 1257 aa16.25■□□□□ 0.19
CACNA1A-235ENST00000637004 ANKRD22Q5VYY1 191 aa16.25■□□□□ 0.19
CACNA1A-235ENST00000637004 SLC44A1Q8WWI5 657 aa16.25■□□□□ 0.19
CACNA1A-235ENST00000637004 FRMD8P1Q9BZ68 369 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-235ENST00000637004 SOX13Q9UN79 622 aa16.25■□□□□ 0.19
CACNA1A-235ENST00000637004 PPME1Q9Y570 386 aa16.25■□□□□ 0.19
CACNA1A-235ENST00000637004 NRXN2Q9P2S2 1712 aa16.25■□□□□ 0.19
CACNA1A-235ENST00000637004 RGS2P41220 211 aa16.25■□□□□ 0.19
CACNA1A-235ENST00000637004 QARSP47897 775 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-235ENST00000637004 GAD2Q05329 585 aa16.25■□□□□ 0.19
CACNA1A-235ENST00000637004 BRDTQ58F21 947 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-235ENST00000637004 TATDN1Q6P1N9 297 aa16.25■□□□□ 0.19
CACNA1A-235ENST00000637004 SH2D5Q6ZV89 423 aa16.25■□□□□ 0.19
CACNA1A-235ENST00000637004 ARID3BQ8IVW6 561 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-235ENST00000637004 KLHL4Q9C0H6 718 aa16.25■□□□□ 0.19
CACNA1A-235ENST00000637004 SORCS3Q9UPU3 1222 aa16.25■□□□□ 0.19
CACNA1A-235ENST00000637004 LGR5O75473 907 aa16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 ASLP04424 464 aa16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 ERFP50548 548 aa16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 STAT2P52630 851 aa16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 IRX4P78413 519 aa16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 TMPRSS15P98073 1019 aa16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 MYBPC3Q14896 1274 aa16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 DOK7Q18PE1 504 aa16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 EFHC1Q5JVL4 640 aa16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 POMGNT1Q8WZA1 660 aa16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 SRPK1Q96SB4 655 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 MXRA8Q9BRK3 442 aa16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 WDR83Q9BRX9 315 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 PREBQ9HCU5 417 aa16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 SSX2IPQ9Y2D8 614 aa16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 GMEB1Q9Y692 573 aa16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 E5RJQ4 531 aa16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 TMCC1O94876 653 aa16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 LYPLA2O95372 231 aa16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 CDKN2BP42772 138 aa16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 FAAP100Q0VG06 881 aa16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 MDH1BQ5I0G3 518 aa16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 RBM12BQ8IXT5 1001 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 TTC13Q8NBP0 860 aa16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 DGCR14Q96DF8 476 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 ACAP3Q96P50 834 aa16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 CCDC106Q9BWC9 280 aa16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 ZNRF3Q9ULT6 936 aa16.24■□□□□ 0.19
CACNA1A-235ENST00000637004 TMEM191CA6NGB0 347 aa16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 A6NJR5 290 aa16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 SPAG6O75602 509 aa16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 SERPINA6P08185 405 aa16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 TMEM191BP0C7N4 346 aa16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 TCF4P15884 667 aa16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 VCLP18206 1134 aa16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 GNA15P30679 374 aa16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 TCP10Q12799 353 aa16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 TBC1D10BQ4KMP7 808 aaPredicted RBP16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 CRLF3Q8IUI8 442 aa16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 SLC25A41Q8N5S1 370 aa16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 TMEM161BQ8NDZ6 487 aa16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 RSAD2Q8WXG1 361 aa16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 E2F7Q96AV8 911 aa16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 LENG1Q96BZ8 264 aaPredicted RBP16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 GPRC5CQ9NQ84 441 aa16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 CIDEBQ9UHD4 219 aa16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 MRPL11Q9Y3B7 192 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 RBBP6Q7Z6E9 1792 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 DCAF8L1A6NGE4 600 aa16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 YWHABP31946 246 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 RPL7AP62424 266 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 BST1Q10588 318 aa16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 USP4Q13107 963 aa16.23■□□□□ 0.19
CACNA1A-235ENST00000637004 MMEL1Q495T6 779 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms