RNA–Protein interactions for RNA: ENST00000636603.1

CHRNA7-217, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA7, Length 2,012 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-217ENST00000636603 FNDC1Q4ZHG4 1894 aaPredicted RBP16.23■□□□□ 0.19
CHRNA7-217ENST00000636603 ATP2C2O75185 946 aa16.23■□□□□ 0.19
CHRNA7-217ENST00000636603 C16orf59Q7L2K0 433 aa16.23■□□□□ 0.19
CHRNA7-217ENST00000636603 ZNF677Q86XU0 584 aa16.23■□□□□ 0.19
CHRNA7-217ENST00000636603 NPAS4Q8IUM7 802 aa16.23■□□□□ 0.19
CHRNA7-217ENST00000636603 TMEM199Q8N511 208 aa16.23■□□□□ 0.19
CHRNA7-217ENST00000636603 WDTC1Q8N5D0 677 aa16.23■□□□□ 0.19
CHRNA7-217ENST00000636603 KRT35Q92764 455 aa16.23■□□□□ 0.19
CHRNA7-217ENST00000636603 BADQ92934 168 aa16.23■□□□□ 0.19
CHRNA7-217ENST00000636603 FAM193BQ96PV7 902 aaPredicted RBP16.23■□□□□ 0.19
CHRNA7-217ENST00000636603 DPH5Q9H2P9 285 aa16.23■□□□□ 0.19
CHRNA7-217ENST00000636603 SNX25Q9H3E2 840 aa16.23■□□□□ 0.19
CHRNA7-217ENST00000636603 ZDHHC18Q9NUE0 388 aa16.23■□□□□ 0.19
CHRNA7-217ENST00000636603 A6NNZ2 444 aa16.22■□□□□ 0.19
CHRNA7-217ENST00000636603 NT5C1B-RDH14C9J2C7 533 aa16.22■□□□□ 0.19
CHRNA7-217ENST00000636603 RTN2O75298 545 aa16.22■□□□□ 0.19
CHRNA7-217ENST00000636603 CYP1A1P04798 512 aaPredicted RBP16.22■□□□□ 0.19
CHRNA7-217ENST00000636603 PAEPP09466 180 aa16.22■□□□□ 0.19
CHRNA7-217ENST00000636603 RFC2P35250 354 aa16.22■□□□□ 0.19
CHRNA7-217ENST00000636603 MDH1P40925 334 aaKnown RBP16.22■□□□□ 0.19
CHRNA7-217ENST00000636603 BCAR1P56945 870 aa16.22■□□□□ 0.19
CHRNA7-217ENST00000636603 PSMC1P62191 440 aaKnown RBP16.22■□□□□ 0.19
CHRNA7-217ENST00000636603 TUBB8Q3ZCM7 444 aa16.22■□□□□ 0.19
CHRNA7-217ENST00000636603 DUPD1Q68J44 220 aa16.22■□□□□ 0.19
CHRNA7-217ENST00000636603 ACAD10Q6JQN1 1059 aa16.22■□□□□ 0.19
CHRNA7-217ENST00000636603 ADAT2Q7Z6V5 191 aaKnown RBP16.22■□□□□ 0.19
CHRNA7-217ENST00000636603 TOP6BLQ8N6T0 577 aa16.22■□□□□ 0.19
CHRNA7-217ENST00000636603 CCDC26Q8TAB7 109 aa16.22■□□□□ 0.19
CHRNA7-217ENST00000636603 LRRC45Q96CN5 670 aa16.22■□□□□ 0.19
CHRNA7-217ENST00000636603 DDX27Q96GQ7 796 aaKnown RBP16.22■□□□□ 0.19
CHRNA7-217ENST00000636603 EPB41L4BQ9H329 900 aa16.22■□□□□ 0.19
CHRNA7-217ENST00000636603 KANSL3Q9P2N6 904 aa16.22■□□□□ 0.19
CHRNA7-217ENST00000636603 FAM169AQ9Y6X4 670 aa16.22■□□□□ 0.19
CHRNA7-217ENST00000636603 EBAG9O00559 213 aa16.21■□□□□ 0.19
CHRNA7-217ENST00000636603 NOMO3P69849 1222 aa16.21■□□□□ 0.19
CHRNA7-217ENST00000636603 PPP1R26Q5T8A7 1209 aaPredicted RBP16.21■□□□□ 0.19
CHRNA7-217ENST00000636603 KIAA0319Q5VV43 1072 aa16.21■□□□□ 0.19
CHRNA7-217ENST00000636603 DCLRE1AQ6PJP8 1040 aa16.21■□□□□ 0.19
CHRNA7-217ENST00000636603 CPNE8Q86YQ8 564 aa16.21■□□□□ 0.19
CHRNA7-217ENST00000636603 UBA3Q8TBC4 463 aa16.21■□□□□ 0.19
CHRNA7-217ENST00000636603 EPN3Q9H201 632 aa16.21■□□□□ 0.19
CHRNA7-217ENST00000636603 SLC12A6Q9UHW9 1150 aa16.21■□□□□ 0.19
CHRNA7-217ENST00000636603 CYTH4Q9UIA0 394 aa16.21■□□□□ 0.19
CHRNA7-217ENST00000636603 MICAL2O94851 1124 aa16.21■□□□□ 0.18
CHRNA7-217ENST00000636603 GZMAP12544 262 aa16.21■□□□□ 0.18
CHRNA7-217ENST00000636603 CCDC130P13994 396 aa16.21■□□□□ 0.18
CHRNA7-217ENST00000636603 CTNNA1P35221 906 aaKnown RBP16.21■□□□□ 0.18
CHRNA7-217ENST00000636603 PTGIRP43119 386 aa16.21■□□□□ 0.18
CHRNA7-217ENST00000636603 PEX5P50542 639 aa16.21■□□□□ 0.18
CHRNA7-217ENST00000636603 SGO2Q562F6 1265 aa16.21■□□□□ 0.18
CHRNA7-217ENST00000636603 RHOT2Q8IXI1 618 aa16.21■□□□□ 0.18
CHRNA7-217ENST00000636603 FAM114A2Q9NRY5 505 aa16.21■□□□□ 0.18
CHRNA7-217ENST00000636603 TJP2Q9UDY2 1190 aa16.21■□□□□ 0.18
CHRNA7-217ENST00000636603 LTBP2Q14767 1821 aa16.2■□□□□ 0.18
CHRNA7-217ENST00000636603 O00370 1275 aa16.2■□□□□ 0.18
CHRNA7-217ENST00000636603 NRP1O14786 923 aa16.2■□□□□ 0.18
CHRNA7-217ENST00000636603 PPFIA2O75334 1257 aa16.2■□□□□ 0.18
CHRNA7-217ENST00000636603 VDRP11473 427 aa16.2■□□□□ 0.18
CHRNA7-217ENST00000636603 WARSP23381 471 aaKnown RBP16.2■□□□□ 0.18
CHRNA7-217ENST00000636603 SLC11A1P49279 550 aa16.2■□□□□ 0.18
CHRNA7-217ENST00000636603 SEC24CP53992 1094 aa16.2■□□□□ 0.18
CHRNA7-217ENST00000636603 WDR5P61964 334 aaKnown RBP16.2■□□□□ 0.18
CHRNA7-217ENST00000636603 C11orf63Q6NUN7 778 aa16.2■□□□□ 0.18
CHRNA7-217ENST00000636603 PACS2Q86VP3 889 aa16.2■□□□□ 0.18
CHRNA7-217ENST00000636603 RSPH1Q8WYR4 309 aa16.2■□□□□ 0.18
CHRNA7-217ENST00000636603 CD101Q93033 1021 aa16.2■□□□□ 0.18
CHRNA7-217ENST00000636603 UROC1Q96N76 676 aa16.2■□□□□ 0.18
CHRNA7-217ENST00000636603 C11orf70Q9BRQ4 267 aa16.2■□□□□ 0.18
CHRNA7-217ENST00000636603 DDX43Q9NXZ2 648 aaKnown RBP16.2■□□□□ 0.18
CHRNA7-217ENST00000636603 CNOT8Q9UFF9 292 aaKnown RBP16.2■□□□□ 0.18
CHRNA7-217ENST00000636603 PRKAG2Q9UGJ0 569 aa16.2■□□□□ 0.18
CHRNA7-217ENST00000636603 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.2■□□□□ 0.18
CHRNA7-217ENST00000636603 ABHD14A-ACY1A0A1B0GW23 586 aa16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 GABRDO14764 452 aa16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 DGKIO75912 1065 aa16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 MTA2O94776 668 aa16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 DHX9Q08211 1270 aaKnown RBP16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 ZDHHC24Q6UX98 284 aa16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 MMS22LQ6ZRQ5 1243 aa16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 TMEM173Q86WV6 379 aaPredicted RBP16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 MCOLN2Q8IZK6 566 aa16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 PRELID2Q8N945 189 aa16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 UBLCP1Q8WVY7 318 aaPredicted RBP16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 TOP1MTQ969P6 601 aa16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 ZNF653Q96CK0 615 aa16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 B3GALT6Q96L58 329 aa16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 ERP44Q9BS26 406 aa16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 TRIM31Q9BZY9 425 aa16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 TSPAN16Q9UKR8 245 aa16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 ZMYND8Q9ULU4 1186 aaPredicted RBP16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 PCDHGC3Q9UN70 934 aa16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 UTP11Q9Y3A2 253 aaKnown RBP16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 PCDHA3Q9Y5H8 950 aa16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 M0QYV0 167 aa16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 NDUFAB1O14561 156 aa16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 MYZAPP0CAP1 466 aa16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 ADORA2BP29275 332 aa16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 NSFP46459 744 aaKnown RBP16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 GPC5P78333 572 aa16.19■□□□□ 0.18
CHRNA7-217ENST00000636603 CENPCQ03188 943 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms