RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 RABGAP1LQ5R372 815 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 MZT2BQ6NZ67 158 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 TXNDC11Q6PKC3 985 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 CENPLQ8N0S6 344 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 E2F7Q96AV8 911 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 MAGED4Q96JG8 741 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 ACE2Q9BYF1 805 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 TMEM168Q9H0V1 697 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 TMEM138Q9NPI0 162 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 PI4KBQ9UBF8 816 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 CHORDC1Q9UHD1 332 aaPredicted RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 TRMT6Q9UJA5 497 aaKnown RBP6.22□□□□□ -1.41
SCN1A-212ENST00000636194 GSTK1Q9Y2Q3 226 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 PCDHB9Q9Y5E1 797 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 ZHX2Q9Y6X8 837 aa6.22□□□□□ -1.41
SCN1A-212ENST00000636194 ADGBQ8N7X0 1667 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 YEATS2Q9ULM3 1422 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 GRID2IPA4D2P6 1211 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 POTEMA6NI47 508 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 BMP3P12645 472 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 PRKAR2AP13861 404 aaKnown RBP6.21□□□□□ -1.41
SCN1A-212ENST00000636194 SERPINB9P50453 376 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 CLCN6P51797 869 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 PLOD1Q02809 727 aaPredicted RBP6.21□□□□□ -1.41
SCN1A-212ENST00000636194 ATP13A4Q4VNC1 1196 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 TNNI3KQ59H18 835 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 GRHL2Q6ISB3 625 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 POTEHQ6S545 545 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 POTEGQ6S5H5 508 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 C3orf20Q8ND61 904 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 USP7Q93009 1102 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 CINPQ9BW66 212 aaPredicted RBP6.21□□□□□ -1.41
SCN1A-212ENST00000636194 APOL5Q9BWW9 433 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 DSEQ9UL01 958 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 METTL21EPA6NDL7 271 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 PLOD2O00469 737 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 EIF3HO15372 352 aaKnown RBP eCLIP6.21□□□□□ -1.416e-7■■■■□ 20.9
SCN1A-212ENST00000636194 RPS6KA5O75582 802 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 CCNG1P51959 295 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 CHN2P52757 468 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 ILF3Q12906 894 aaKnown RBP eCLIP6.21□□□□□ -1.41
SCN1A-212ENST00000636194 KPNB1Q14974 876 aaKnown RBP6.21□□□□□ -1.41
SCN1A-212ENST00000636194 ZNF284Q2VY69 593 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 MZT2AQ6P582 158 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 OTOAQ7RTW8 1153 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 MYCBPAPQ8TBZ2 947 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 OSBPL11Q9BXB4 747 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 XPO4Q9C0E2 1151 aaKnown RBP6.21□□□□□ -1.41
SCN1A-212ENST00000636194 YIPF3Q9GZM5 350 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 CCDC86Q9H6F5 360 aaKnown RBP6.21□□□□□ -1.41
SCN1A-212ENST00000636194 CBX8Q9HC52 389 aa6.21□□□□□ -1.41
SCN1A-212ENST00000636194 CYP2D7A0A087X1C5 515 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 H7C4K7 107 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 VPS26AO75436 327 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 SERPINA3P01011 423 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 NPR3P17342 541 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 STOMP27105 288 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 ACLYP53396 1101 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 OXCT1P55809 520 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 EXOSC10Q01780 885 aaKnown RBP6.21□□□□□ -1.42
SCN1A-212ENST00000636194 ITGA9Q13797 1035 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 BEND6Q5SZJ8 279 aaPredicted RBP6.21□□□□□ -1.42
SCN1A-212ENST00000636194 DAW1Q8N136 415 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 RIBC1Q8N443 379 aaPredicted RBP6.21□□□□□ -1.42
SCN1A-212ENST00000636194 PPM1NQ8N819 430 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 RIOK2Q9BVS4 552 aaKnown RBP6.21□□□□□ -1.42
SCN1A-212ENST00000636194 ADGRE3Q9BY15 652 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 LRRC4BQ9NT99 713 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 WDR35Q9P2L0 1181 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 MROH2BQ7Z745 1585 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 PSTPIP1O43586 416 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 FGGP02679 453 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 CTSWP56202 376 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 PSMC5P62195 406 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 RPS8P62241 208 aaKnown RBP6.21□□□□□ -1.42
SCN1A-212ENST00000636194 SGCGQ13326 291 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 ZNF57Q68EA5 555 aaPredicted RBP6.21□□□□□ -1.42
SCN1A-212ENST00000636194 CNSTQ6PJW8 725 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 RBM43Q6ZSC3 357 aaKnown RBP6.21□□□□□ -1.42
SCN1A-212ENST00000636194 DSG4Q86SJ6 1040 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 FAM160A2Q8N612 972 aaPredicted RBP6.21□□□□□ -1.42
SCN1A-212ENST00000636194 ZNF333Q96JL9 665 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 NMRK2Q9NPI5 230 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 ZNF214Q9UL59 606 aaPredicted RBP6.21□□□□□ -1.42
SCN1A-212ENST00000636194 TMA7Q9Y2S6 64 aaKnown RBP6.21□□□□□ -1.42
SCN1A-212ENST00000636194 CD109Q6YHK3 1445 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 LOC102724159A0A0B4J2E5 919 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 RHPN2P1A8MT19 583 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 BHMG1C9JSJ3 638 aaPredicted RBP6.21□□□□□ -1.42
SCN1A-212ENST00000636194 H3BNH8 94 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 CD4P01730 458 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 POLBP06746 335 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 IRX1P78414 480 aaPredicted RBP6.21□□□□□ -1.42
SCN1A-212ENST00000636194 CENPCQ03188 943 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 CHRNB3Q05901 458 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 PWP2Q15269 919 aaKnown RBP6.21□□□□□ -1.42
SCN1A-212ENST00000636194 FAM102AQ5T9C2 384 aaPredicted RBP6.21□□□□□ -1.42
SCN1A-212ENST00000636194 AGAP9Q5VTM2 703 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 LAYNQ6UX15 382 aa6.21□□□□□ -1.42
SCN1A-212ENST00000636194 KCNB2Q92953 911 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms