RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 SH3BGRP55822 239 aaPredicted RBP3.29□□□□□ -1.88
PSPC1-208ENST00000635562 TMF1P82094 1093 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 DMTNQ08495 405 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 EIF2B5Q13144 721 aaKnown RBP3.29□□□□□ -1.88
PSPC1-208ENST00000635562 RRP1BQ14684 758 aaKnown RBP3.29□□□□□ -1.88
PSPC1-208ENST00000635562 CCNG2Q16589 344 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 SLC45A4Q5BKX6 768 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 RNF220Q5VTB9 566 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 AFMIDQ63HM1 303 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 NUGGCQ68CJ6 796 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 ITPRIPL1Q6GPH6 555 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 GALNT17Q6IS24 598 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 TATDN1Q6P1N9 297 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 APOA5Q6Q788 366 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 FAM111BQ6SJ93 734 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 PCSK4Q6UW60 755 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 CCDC149Q6ZUS6 474 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 NEK10Q6ZWH5 1172 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 RSPH3Q86UC2 560 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 ANKRD18AQ8IVF6 992 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 CCDC191Q8NCU4 936 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 IL17RDQ8NFM7 739 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 FBXO18Q8NFZ0 1043 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 OR5M3Q8NGP4 307 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 GABPB2Q8TAK5 448 aaPredicted RBP3.29□□□□□ -1.88
PSPC1-208ENST00000635562 SLC35B2Q8TB61 432 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 ADAMTS18Q8TE60 1221 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 STON2Q8WXE9 905 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 ANKS1AQ92625 1134 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 JAKMIP2Q96AA8 810 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 SLC35A4Q96G79 324 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 MRGPRX1Q96LB2 322 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 NT5C1BQ96P26 610 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 ASB2Q96Q27 587 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 GSDMAQ96QA5 445 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 RMDN3Q96TC7 470 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 SEC62Q99442 399 aaKnown RBP3.29□□□□□ -1.88
PSPC1-208ENST00000635562 AGAP2Q99490 1192 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 BARD1Q99728 777 aaKnown RBP3.29□□□□□ -1.88
PSPC1-208ENST00000635562 MYOCQ99972 504 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 TCF25Q9BQ70 676 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 NDC1Q9BTX1 674 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 CRB3Q9BUF7 120 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 SLC26A6Q9BXS9 759 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 WDR12Q9GZL7 423 aaKnown RBP3.29□□□□□ -1.88
PSPC1-208ENST00000635562 RPAP3Q9H6T3 665 aaPredicted RBP3.29□□□□□ -1.88
PSPC1-208ENST00000635562 WDR26Q9H7D7 661 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 RMI1Q9H9A7 625 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 ZMAT3Q9HA38 289 aaKnown RBP3.29□□□□□ -1.88
PSPC1-208ENST00000635562 RSAD1Q9HA92 442 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 PNPOQ9NVS9 261 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 SIDT1Q9NXL6 827 aaKnown RBP3.29□□□□□ -1.88
PSPC1-208ENST00000635562 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.29□□□□□ -1.88
PSPC1-208ENST00000635562 CRYL1Q9Y2S2 319 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 TMEM98Q9Y2Y6 226 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 ABCC9O60706 1549 aa3.29□□□□□ -1.88
PSPC1-208ENST00000635562 TMEM94Q12767 1356 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 B4E171 279 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 MYO1FO00160 1098 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 CTAGE5O15320 804 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 DKC1O60832 514 aaKnown RBP eCLIP3.28□□□□□ -1.88
PSPC1-208ENST00000635562 SBK3P0C264 359 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 SKILP12757 684 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 MYF5P13349 255 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 NPR1P16066 1061 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 SLC6A4P31645 630 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 ATP6V1E1P36543 226 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 CD86P42081 329 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 LIMK1P53667 647 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 MRPS35P82673 323 aaKnown RBP3.28□□□□□ -1.88
PSPC1-208ENST00000635562 LRRC74AQ0VAA2 488 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 FGL2Q14314 439 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 POLD3Q15054 466 aaPredicted RBP3.28□□□□□ -1.88
PSPC1-208ENST00000635562 BMT2Q1RMZ1 405 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 FLYWCH1Q4VC44 716 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 PABPC1LQ4VXU2 614 aaKnown RBP3.28□□□□□ -1.88
PSPC1-208ENST00000635562 METTL24Q5JXM2 366 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 EMC10Q5UCC4 262 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 ANKS6Q68DC2 871 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 DARS2Q6PI48 645 aaKnown RBP3.28□□□□□ -1.88
PSPC1-208ENST00000635562 TMCO3Q6UWJ1 677 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 GADL1Q6ZQY3 521 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 PPP1R3BQ86XI6 285 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 TEX11Q8IYF3 940 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 CCAR2Q8N163 923 aaKnown RBP3.28□□□□□ -1.88
PSPC1-208ENST00000635562 IL31RAQ8NI17 732 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 BRSK1Q8TDC3 778 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 SSH3Q8TE77 659 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 ZNF606Q8WXB4 792 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 LRTOMTQ8WZ04 291 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 CENPIQ92674 756 aaPredicted RBP3.28□□□□□ -1.88
PSPC1-208ENST00000635562 VOPP1Q96AW1 172 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 RBM18Q96H35 190 aaKnown RBP3.28□□□□□ -1.88
PSPC1-208ENST00000635562 UBXN10Q96LJ8 280 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 CCDC138Q96M89 665 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 ZNF512Q96ME7 567 aaPredicted RBP3.28□□□□□ -1.88
PSPC1-208ENST00000635562 ADPGKQ9BRR6 497 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 PI4K2AQ9BTU6 479 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 TTPALQ9BTX7 342 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 MRI1Q9BV20 369 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms