RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 MRPL45Q9BRJ2 306 aaKnown RBP13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 APOL5Q9BWW9 433 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 NGRNQ9NPE2 291 aaKnown RBP13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 CXXC1Q9P0U4 656 aaPredicted RBP13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 A0A0G2JMZ2 1700 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 GJB5O95377 273 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 FTLP02792 175 aaPredicted RBP13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 IFFO1Q0D2I5 559 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 MESDQ14696 234 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 SHHQ15465 462 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 FOXR1Q6PIV2 292 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 PRSS55Q6UWB4 352 aaPredicted RBP13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 SLC47A2Q86VL8 602 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 RASGEF1CQ8N431 466 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 TOP1MTQ969P6 601 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 ACP6Q9NPH0 428 aa13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 CNOT8Q9UFF9 292 aaKnown RBP13.11□□□□□ -0.31
SYNGAP1-207ENST00000628646 CCDC130P13994 396 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 PTPN1P18031 435 aaKnown RBP13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 PROZP22891 400 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 TKTP29401 623 aaKnown RBP13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 ACTN2P35609 894 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 FAM102AQ5T9C2 384 aaPredicted RBP13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 BTBD8Q5XKL5 378 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 IQCKQ8N0W5 287 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 ACTRT1Q8TDG2 376 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 PAAF1Q9BRP4 392 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 UTP11Q9Y3A2 253 aaKnown RBP13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 NCANO14594 1321 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 GALTP07902 379 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 TMEM240Q5SV17 173 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 CASKIN2Q8WXE0 1202 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 HES6Q96HZ4 224 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 GAS2L1Q99501 681 aaPredicted RBP13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 RAB17Q9H0T7 212 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 SLC27A5Q9Y2P5 690 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 PGRMC1O00264 195 aaKnown RBP13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 DPYSL4O14531 572 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 LMAN1P49257 510 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 SOX4Q06945 474 aaPredicted RBP13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 TTMPQ5BVD1 217 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 DCAF12L1Q5VU92 463 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 EMBQ6PCB8 327 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 LRRC31Q6UY01 552 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 NT5DC3Q86UY8 548 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 C1orf131Q8NDD1 294 aaKnown RBP13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 RSPH1Q8WYR4 309 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 C18orf8Q96DM3 657 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 SLITRK1Q96PX8 696 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 TGS1Q96RS0 853 aaKnown RBP13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 CENPHQ9H3R5 247 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 MTRF1LQ9UGC7 380 aaKnown RBP13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 CCDC188H7C350 402 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 GRAP2O75791 330 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 FGF18O76093 207 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 DDHD2O94830 711 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 EPHB4P54760 987 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 RPL10AP62906 217 aaKnown RBP13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 POU5F1Q01860 360 aaKnown RBP13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 VARS2Q5ST30 1063 aaKnown RBP13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 TRIM72Q6ZMU5 477 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 RTN4RL1Q86UN2 441 aaPredicted RBP13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 MREGQ8N565 214 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 NKX2-4Q9H2Z4 354 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 HCSTQ9UBK5 93 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 TSPAN16Q9UKR8 245 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 SIP14410 1827 aa13.1□□□□□ -0.31
SYNGAP1-207ENST00000628646 KRIT1O00522 736 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 PTGESO14684 152 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 CYP11B1P15538 503 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 NNTQ13423 1086 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 ZSCAN26Q16670 478 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 C2CD6Q53TS8 623 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 C1orf53Q5VUE5 145 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 MMS22LQ6ZRQ5 1243 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 TMEM130Q8N3G9 435 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 GIPC2Q8TF65 315 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 MRPL47Q9HD33 250 aaKnown RBP13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 FEZ2Q9UHY8 353 aaPredicted RBP13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 KIAA1257Q9ULG3 409 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 ESYT3A0FGR9 886 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 RAD51CO43502 376 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 EPHB3P54753 998 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 ZNF697Q5TEC3 545 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 ARFGAP2Q8N6H7 521 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 TOP6BLQ8N6T0 577 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 C12orf29Q8N999 325 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 KLHL23Q8NBE8 558 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 B3GALNT2Q8NCR0 500 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 RUNDC3BQ96NL0 473 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 DPP7Q9UHL4 492 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 PTPRJQ12913 1337 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 CALB1P05937 261 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 PPM1LQ5SGD2 360 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 CYP4A22Q5TCH4 519 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 MRPL10Q7Z7H8 261 aaKnown RBP13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 KLHL7Q8IXQ5 586 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 ZNF606Q8WXB4 792 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms