RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 HESX1Q9UBX0 185 aa14.84□□□□□ -0.03
SNRPA1-216ENST00000626000 MUC3AQ02505 3323 aa14.84□□□□□ -0.03
SNRPA1-216ENST00000626000 MYO10Q9HD67 2058 aa14.84□□□□□ -0.03
SNRPA1-216ENST00000626000 NUP210Q8TEM1 1887 aaPredicted RBP14.84□□□□□ -0.03
SNRPA1-216ENST00000626000 TRAV19A0A0A6YYK7 116 aa14.83□□□□□ -0.04
SNRPA1-216ENST00000626000 SMTNL1A8MU46 457 aa14.83□□□□□ -0.04
SNRPA1-216ENST00000626000 VDRP11473 427 aa14.83□□□□□ -0.04
SNRPA1-216ENST00000626000 NPR3P17342 541 aa14.83□□□□□ -0.04
SNRPA1-216ENST00000626000 YWHAQP27348 245 aa14.83□□□□□ -0.04
SNRPA1-216ENST00000626000 RAD23BP54727 409 aa14.83□□□□□ -0.04
SNRPA1-216ENST00000626000 PLCB2Q00722 1185 aa14.83□□□□□ -0.04
SNRPA1-216ENST00000626000 ZNF268Q14587 947 aaPredicted RBP14.83□□□□□ -0.04
SNRPA1-216ENST00000626000 FAM78AQ5JUQ0 283 aa14.83□□□□□ -0.04
SNRPA1-216ENST00000626000 C1orf228Q6PIY5 440 aa14.83□□□□□ -0.04
SNRPA1-216ENST00000626000 TRIM65Q6PJ69 517 aa14.83□□□□□ -0.04
SNRPA1-216ENST00000626000 YAF2Q8IY57 180 aa14.83□□□□□ -0.04
SNRPA1-216ENST00000626000 KIAA1958Q8N8K9 716 aa14.83□□□□□ -0.04
SNRPA1-216ENST00000626000 GPR152Q8TDT2 470 aa14.83□□□□□ -0.04
SNRPA1-216ENST00000626000 WHAMMQ8TF30 809 aa14.83□□□□□ -0.04
SNRPA1-216ENST00000626000 DNASE1L2Q92874 299 aa14.83□□□□□ -0.04
SNRPA1-216ENST00000626000 FGF14Q92915 247 aa14.83□□□□□ -0.04
SNRPA1-216ENST00000626000 SHDQ96IW2 340 aa14.83□□□□□ -0.04
SNRPA1-216ENST00000626000 TRPV5Q9NQA5 729 aa14.83□□□□□ -0.04
SNRPA1-216ENST00000626000 FAM49BQ9NUQ9 324 aa14.83□□□□□ -0.04
SNRPA1-216ENST00000626000 THG1LQ9NWX6 298 aaKnown RBP14.83□□□□□ -0.04
SNRPA1-216ENST00000626000 APEX2Q9UBZ4 518 aa14.83□□□□□ -0.04
SNRPA1-216ENST00000626000 HMGXB4Q9UGU5 601 aa14.83□□□□□ -0.04
SNRPA1-216ENST00000626000 GREB1Q4ZG55 1949 aa14.83□□□□□ -0.04
SNRPA1-216ENST00000626000 DENND4CQ5VZ89 1909 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 MYH10P35580 1976 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 CLDN5O00501 218 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 USP17L7P0C7H9 530 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 CCDC130P13994 396 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 PSMC3P17980 439 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 GPR15P49685 360 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 TUBP50607 506 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 BCAT1P54687 386 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 LRMPQ12912 555 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 MEA1Q16626 185 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 CCDC142Q17RM4 750 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 ZNF394Q53GI3 561 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 FKBP15Q5T1M5 1219 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 CDKAL1Q5VV42 579 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 PARM1Q6UWI2 310 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 CMTM8Q8IZV2 173 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 CELF5Q8N6W0 485 aaKnown RBP14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 C12orf29Q8N999 325 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 ANKRD52Q8NB46 1076 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 SLC4A11Q8NBS3 891 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 IRF7Q92985 503 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 MSANTD3Q96H12 275 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 TWNKQ96RR1 684 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 ARID3AQ99856 593 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 TRMT61BQ9BVS5 477 aaKnown RBP14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 DUSP16Q9BY84 665 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 EPHX3Q9H6B9 360 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 FBXL21Q9UKT6 434 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 PCDHB4Q9Y5E5 795 aa14.82□□□□□ -0.04
SNRPA1-216ENST00000626000 PATJQ8NI35 1801 aa14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 OBSL1O75147 1896 aa14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 FAM92AA1XBS5 289 aa14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 TMEM221A6NGB7 291 aa14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 M0R296 226 aa14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 PES1O00541 588 aaKnown RBP14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 MED7O43513 233 aa14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 SETSIPP0DME0 302 aa14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 CD19P15391 556 aa14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 GJA1P17302 382 aa14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 ADORA2BP29275 332 aa14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 PSEN1P49768 467 aa14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 SLC5A3P53794 718 aa14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 TPM4P67936 248 aa14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 ARHGAP29Q52LW3 1261 aa14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 TMEM270Q6UE05 265 aa14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 CLEC20AQ6ZU45 233 aa14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 PAQR9Q6ZVX9 377 aa14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 TADA2BQ86TJ2 420 aa14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 DDX42Q86XP3 938 aaKnown RBP eCLIP14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 ARID3BQ8IVW6 561 aaPredicted RBP14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 MFSD6LQ8IWD5 586 aa14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 UBR7Q8N806 425 aa14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 FBXO32Q969P5 355 aa14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 ELMO3Q96BJ8 720 aa14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 CDK5RAP1Q96SZ6 601 aaKnown RBP14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 IL37Q9NZH6 218 aa14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 CNTN6Q9UQ52 1028 aa14.81□□□□□ -0.04
SNRPA1-216ENST00000626000 TNFRSF10BO14763 440 aa14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 LRRN2O75325 713 aa14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 CKMP06732 381 aa14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 CDK11BP21127 795 aaKnown RBP14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 FCARP24071 287 aa14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 PON1P27169 355 aa14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 MLLT6P55198 1093 aaPredicted RBP14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 MAP3K7CLP57077 242 aa14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 CYP4F8P98187 520 aa14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 PRKCQQ04759 706 aa14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 FCHO2Q0JRZ9 810 aa14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 BST2Q10589 180 aaKnown RBP14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 TAF10Q12962 218 aa14.8□□□□□ -0.04
SNRPA1-216ENST00000626000 ORC1Q13415 861 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms