RNA–Protein interactions for RNA: ENST00000625980.2

SPTAN1-211, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 2

Gene SPTAN1, Length 1,713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-211	ENST00000625980	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
SPTAN1-211	ENST00000625980	GRAP2	O75791	330 aa		13.57	□□□□□ -0.24
SPTAN1-211	ENST00000625980	BDNF	P23560	247 aa		13.57	□□□□□ -0.24
SPTAN1-211	ENST00000625980	ALDH7A1	P49419	539 aa	Known RBP	13.57	□□□□□ -0.24
SPTAN1-211	ENST00000625980	RNASE9	P60153	205 aa	Known RBP	13.57	□□□□□ -0.24
SPTAN1-211	ENST00000625980	MRPL58	Q14197	206 aa	Known RBP	13.57	□□□□□ -0.24
SPTAN1-211	ENST00000625980	RTP2	Q5QGT7	225 aa		13.57	□□□□□ -0.24
SPTAN1-211	ENST00000625980	TMEM240	Q5SV17	173 aa		13.57	□□□□□ -0.24
SPTAN1-211	ENST00000625980	SPOUT1	Q5T280	376 aa	Known RBP	13.57	□□□□□ -0.24
SPTAN1-211	ENST00000625980	DCAF12L1	Q5VU92	463 aa		13.57	□□□□□ -0.24
SPTAN1-211	ENST00000625980	OLFML1	Q6UWY5	402 aa		13.57	□□□□□ -0.24
SPTAN1-211	ENST00000625980	NDRG1	Q92597	394 aa	Known RBP	13.57	□□□□□ -0.24
SPTAN1-211	ENST00000625980	ALG3	Q92685	438 aa		13.57	□□□□□ -0.24
SPTAN1-211	ENST00000625980	HSFY1	Q96LI6	401 aa		13.57	□□□□□ -0.24
SPTAN1-211	ENST00000625980	VN1R3	Q9BXE9	311 aa		13.57	□□□□□ -0.24
SPTAN1-211	ENST00000625980	ZCWPW1	Q9H0M4	648 aa		13.57	□□□□□ -0.24
SPTAN1-211	ENST00000625980	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.57	□□□□□ -0.24
SPTAN1-211	ENST00000625980	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.57	□□□□□ -0.24
SPTAN1-211	ENST00000625980	UST	Q9Y2C2	406 aa		13.57	□□□□□ -0.24
SPTAN1-211	ENST00000625980	MRPL42	Q9Y6G3	142 aa	Known RBP	13.57	□□□□□ -0.24
SPTAN1-211	ENST00000625980		F8VP50	259 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	EFEMP2	O95967	443 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	NDUFV1	P49821	464 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	TAS2R40	P59535	323 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	SLC6A3	Q01959	620 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	TAP1	Q03518	808 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	BTG3	Q14201	252 aa	Predicted RBP	13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	CTXN3	Q4LDR2	81 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	SLC39A12	Q504Y0	691 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	TRNP1	Q6NT89	227 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	KCNT2	Q6UVM3	1135 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	GPRIN1	Q7Z2K8	1008 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	IP6K2	Q9UHH9	426 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	TMEM59L	Q9UK28	342 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	VWA8	A3KMH1	1905 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	HHLA1	C9JL84	531 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	TCF4	P15884	667 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	CTNNA2	P26232	953 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	SLC1A1	P43005	524 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	ACADSB	P45954	432 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	PEX5	P50542	639 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	SLC8A3	P57103	927 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	ADIG	Q0VDE8	80 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	NAA30	Q147X3	362 aa	Predicted RBP	13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	AADACL2	Q6P093	401 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	CMTR2	Q8IYT2	770 aa	Known RBP	13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	MNS1	Q8NEH6	495 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	TSC1	Q92574	1164 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	SMARCD1	Q96GM5	515 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	IGSF21	Q96ID5	467 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	PBK	Q96KB5	322 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	YME1L1	Q96TA2	773 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	CYLD	Q9NQC7	956 aa		13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980		V9GYY5	206 aa	Predicted RBP	13.56	□□□□□ -0.24
SPTAN1-211	ENST00000625980	UQCRHL	A0A096LP55	91 aa		13.55	□□□□□ -0.24
SPTAN1-211	ENST00000625980	MIF4GD	A9UHW6	222 aa	Known RBP	13.55	□□□□□ -0.24
SPTAN1-211	ENST00000625980	CEP104	O60308	925 aa		13.55	□□□□□ -0.24
SPTAN1-211	ENST00000625980	UQCRH	P07919	91 aa		13.55	□□□□□ -0.24
SPTAN1-211	ENST00000625980	PSMA2	P25787	234 aa		13.55	□□□□□ -0.24
SPTAN1-211	ENST00000625980	CTNNA1	P35221	906 aa	Known RBP	13.55	□□□□□ -0.24
SPTAN1-211	ENST00000625980	FLT3	P36888	993 aa		13.55	□□□□□ -0.24
SPTAN1-211	ENST00000625980	ADCY1	Q08828	1119 aa		13.55	□□□□□ -0.24
SPTAN1-211	ENST00000625980	ELAVL2	Q12926	359 aa	Known RBP	13.55	□□□□□ -0.24
SPTAN1-211	ENST00000625980	ZNF211	Q13398	564 aa	Predicted RBP	13.55	□□□□□ -0.24
SPTAN1-211	ENST00000625980	MAPRE1	Q15691	268 aa	Known RBP	13.55	□□□□□ -0.24
SPTAN1-211	ENST00000625980	ZNF280D	Q6N043	979 aa		13.55	□□□□□ -0.24
SPTAN1-211	ENST00000625980	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.55	□□□□□ -0.24
SPTAN1-211	ENST00000625980	SPATA2L	Q8IUW3	424 aa	Predicted RBP	13.55	□□□□□ -0.24
SPTAN1-211	ENST00000625980	ARFGAP1	Q8N6T3	406 aa		13.55	□□□□□ -0.24
SPTAN1-211	ENST00000625980	CEP112	Q8N8E3	955 aa		13.55	□□□□□ -0.24
SPTAN1-211	ENST00000625980	COLGALT1	Q8NBJ5	622 aa		13.55	□□□□□ -0.24
SPTAN1-211	ENST00000625980	RXFP2	Q8WXD0	754 aa		13.55	□□□□□ -0.24
SPTAN1-211	ENST00000625980	KCTD13	Q8WZ19	329 aa		13.55	□□□□□ -0.24
SPTAN1-211	ENST00000625980	ZNF558	Q96NG5	402 aa		13.55	□□□□□ -0.24
SPTAN1-211	ENST00000625980	TTPAL	Q9BTX7	342 aa		13.55	□□□□□ -0.24
SPTAN1-211	ENST00000625980	CSNK1G1	Q9HCP0	422 aa		13.55	□□□□□ -0.24
SPTAN1-211	ENST00000625980	PCDHA3	Q9Y5H8	950 aa		13.55	□□□□□ -0.24
SPTAN1-211	ENST00000625980	PTPRS	Q13332	1948 aa		13.55	□□□□□ -0.24
SPTAN1-211	ENST00000625980	C2CD4B	A6NLJ0	364 aa		13.54	□□□□□ -0.24
SPTAN1-211	ENST00000625980	TBC1D4	O60343	1298 aa		13.54	□□□□□ -0.24
SPTAN1-211	ENST00000625980	TADA3	O75528	432 aa		13.54	□□□□□ -0.24
SPTAN1-211	ENST00000625980	CYP2F1	P24903	491 aa		13.54	□□□□□ -0.24
SPTAN1-211	ENST00000625980	MAN1A1	P33908	653 aa		13.54	□□□□□ -0.24
SPTAN1-211	ENST00000625980	SSR1	P43307	286 aa	Known RBP	13.54	□□□□□ -0.24
SPTAN1-211	ENST00000625980	ARPP19	P56211	112 aa		13.54	□□□□□ -0.24
SPTAN1-211	ENST00000625980	SNX16	P57768	344 aa		13.54	□□□□□ -0.24
SPTAN1-211	ENST00000625980	RAB6C	Q53S08	254 aa		13.54	□□□□□ -0.24
SPTAN1-211	ENST00000625980	RNF168	Q8IYW5	571 aa	Predicted RBP	13.54	□□□□□ -0.24
SPTAN1-211	ENST00000625980	DCP1B	Q8IZD4	617 aa	Known RBP	13.54	□□□□□ -0.24
SPTAN1-211	ENST00000625980	SLC39A11	Q8N1S5	342 aa		13.54	□□□□□ -0.24
SPTAN1-211	ENST00000625980	UBL4B	Q8N7F7	174 aa		13.54	□□□□□ -0.24
SPTAN1-211	ENST00000625980	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.54	□□□□□ -0.24
SPTAN1-211	ENST00000625980	PGLYRP2	Q96PD5	576 aa		13.54	□□□□□ -0.24
SPTAN1-211	ENST00000625980	RAB6C	Q9H0N0	254 aa		13.54	□□□□□ -0.24
SPTAN1-211	ENST00000625980	LRRC4	Q9HBW1	653 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms