RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 COLGALT2Q8IYK4 626 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 BEND7Q8N7W2 519 aaPredicted RBP11.53□□□□□ -0.56
VPS8-227ENST00000625842 LEMD2Q8NC56 503 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 CELF4Q9BZC1 486 aaKnown RBP11.53□□□□□ -0.56
VPS8-227ENST00000625842 TBX20Q9UMR3 447 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 MYO3AQ8NEV4 1616 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 DUSP11O75319 330 aaKnown RBP11.53□□□□□ -0.56
VPS8-227ENST00000625842 RHOBTB1O94844 696 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 NCF2P19878 526 aaPredicted RBP11.53□□□□□ -0.56
VPS8-227ENST00000625842 NMT1P30419 496 aaKnown RBP11.53□□□□□ -0.56
VPS8-227ENST00000625842 RFC2P35250 354 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 NNTQ13423 1086 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 C16orf62Q7Z3J2 963 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 DDIASQ8IXT1 998 aa11.53□□□□□ -0.56
VPS8-227ENST00000625842 MST1RQ04912 1400 aa11.52□□□□□ -0.56
VPS8-227ENST00000625842 RIC1Q4ADV7 1423 aa11.52□□□□□ -0.56
VPS8-227ENST00000625842 VSTM5A8MXK1 200 aa11.52□□□□□ -0.56
VPS8-227ENST00000625842 GPR25O00155 361 aa11.52□□□□□ -0.56
VPS8-227ENST00000625842 PGK1P00558 417 aa11.52□□□□□ -0.56
VPS8-227ENST00000625842 SNRPD1P62314 119 aaKnown RBP11.52□□□□□ -0.56
VPS8-227ENST00000625842 BST2Q10589 180 aaKnown RBP11.52□□□□□ -0.56
VPS8-227ENST00000625842 GRM3Q14832 879 aa11.52□□□□□ -0.56
VPS8-227ENST00000625842 EFTUD2Q15029 972 aaKnown RBP eCLIP11.52□□□□□ -0.562e-6■■■■■ 32.5
VPS8-227ENST00000625842 PSMD5Q16401 504 aa11.52□□□□□ -0.56
VPS8-227ENST00000625842 SETMARQ53H47 684 aaPredicted RBP11.52□□□□□ -0.56
VPS8-227ENST00000625842 GLRA4Q5JXX5 417 aa11.52□□□□□ -0.56
VPS8-227ENST00000625842 CATSPER3Q86XQ3 398 aa11.52□□□□□ -0.56
VPS8-227ENST00000625842 ZDHHC17Q8IUH5 632 aa11.52□□□□□ -0.56
VPS8-227ENST00000625842 AKT1S1Q96B36 256 aa11.52□□□□□ -0.56
VPS8-227ENST00000625842 ZMYND12Q9H0C1 365 aa11.52□□□□□ -0.56
VPS8-227ENST00000625842 WWOXQ9NZC7 414 aa11.52□□□□□ -0.56
VPS8-227ENST00000625842 KIF17Q9P2E2 1029 aa11.52□□□□□ -0.56
VPS8-227ENST00000625842 TRPM1Q7Z4N2 1603 aa11.52□□□□□ -0.56
VPS8-227ENST00000625842 ZSCAN5CA6NGD5 496 aaPredicted RBP11.52□□□□□ -0.57
VPS8-227ENST00000625842 GSNP06396 782 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 SERPINF2P08697 491 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 GSPT1P15170 499 aaKnown RBP11.52□□□□□ -0.57
VPS8-227ENST00000625842 ZNF24P17028 368 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 GPC1P35052 558 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 ELOAQ14241 798 aaKnown RBP11.52□□□□□ -0.57
VPS8-227ENST00000625842 ZCCHC8Q6NZY4 707 aaKnown RBP11.52□□□□□ -0.57
VPS8-227ENST00000625842 POTEAQ6S8J7 498 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 CCNJLQ8IV13 435 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 WDR49Q8IV35 697 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 C10orf53Q8N6V4 93 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 WHAMMQ8TF30 809 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 ARNTL2Q8WYA1 636 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 ACDQ96AP0 544 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 REXO5Q96IC2 774 aaKnown RBP11.52□□□□□ -0.57
VPS8-227ENST00000625842 PPCSQ9HAB8 311 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 APEX2Q9UBZ4 518 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 SCAF8Q9UPN6 1271 aaKnown RBP11.52□□□□□ -0.57
VPS8-227ENST00000625842 GIT1Q9Y2X7 761 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 FAM170AA1A519 330 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 M0R3G1 203 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 CBX4O00257 560 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 EPHB4P54760 987 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 TMPRSS15P98073 1019 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 CENPPQ6IPU0 288 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 CYB5R4Q7L1T6 521 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 MTMR14Q8NCE2 650 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 E2F7Q96AV8 911 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 CYFIP2Q96F07 1278 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 GBP5Q96PP8 586 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 FMO2Q99518 471 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 AGPAT1Q99943 283 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 FRMD8P1Q9BZ68 369 aaPredicted RBP11.52□□□□□ -0.57
VPS8-227ENST00000625842 SLC27A6Q9Y2P4 619 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 CDY2AQ9Y6F7 541 aa11.52□□□□□ -0.57
VPS8-227ENST00000625842 FDFT1P37268 417 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 ACOX1Q15067 660 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 ADCK5Q3MIX3 580 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 RESP18Q5W5W9 173 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 USP45Q70EL2 814 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 COG1Q8WTW3 980 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 RFFLQ8WZ73 363 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 OR8D1Q8WZ84 308 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 CNPY3Q9BT09 278 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 INTS7Q9NVH2 962 aaKnown RBP11.51□□□□□ -0.57
VPS8-227ENST00000625842 RASSF10A6NK89 507 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 SNTNA6NMZ2 147 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 LGALS16A8MUM7 142 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 EVPLLA8MZ36 301 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 SEPT4O43236 478 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 RAMP2O60895 175 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 AVILO75366 819 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 INHAP05111 366 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 LGALS2P05162 132 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 SPRP35270 261 aaPredicted RBP11.51□□□□□ -0.57
VPS8-227ENST00000625842 SREBF1P36956 1147 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 REPS1Q96D71 796 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 QRFPRQ96P65 431 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 ATP13A1Q9HD20 1204 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 DEC1Q9P2X7 70 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 DIP2CQ9Y2E4 1556 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 ZPBP2Q6X784 338 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 ATG9AQ7Z3C6 839 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 FAM163AQ96GL9 167 aaPredicted RBP11.51□□□□□ -0.57
VPS8-227ENST00000625842 BTBD6Q96KE9 485 aa11.51□□□□□ -0.57
VPS8-227ENST00000625842 PANX3Q96QZ0 392 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms