RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 ZNF570Q96NI8 536 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 FRMD8P1Q9BZ68 369 aaPredicted RBP11.79□□□□□ -0.52
VARS2-213ENST00000625423 FETUBQ9UGM5 382 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 DCTN4Q9UJW0 460 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 LCTP09848 1927 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 CXCL8P10145 99 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 RBP3P10745 1247 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 DPYSL3Q14195 570 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 FYB2Q5VWT5 728 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 NPNTQ6UXI9 565 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 MTDHQ86UE4 582 aaKnown RBP11.79□□□□□ -0.52
VARS2-213ENST00000625423 IGDCC3Q8IVU1 814 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 ZNF276Q8N554 614 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 BANPQ8N9N5 519 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 NLRP4Q96MN2 994 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 TWNKQ96RR1 684 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 TBC1D10AQ9BXI6 508 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 SDCBP2Q9H190 292 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 BTBD7Q9P203 1132 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 HMGXB4Q9UGU5 601 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 ZFP69BQ9UJL9 534 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 NUMBLQ9Y6R0 609 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 INO80B-WBP1J3KQ70 363 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 APOC4-APOC2K7ER74 178 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 APOC2P02655 101 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 MMRN1Q13201 1228 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 MXD4Q14582 209 aaPredicted RBP11.78□□□□□ -0.52
VARS2-213ENST00000625423 TREML2Q5T2D2 321 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 ATF7IP2Q5U623 682 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 LONP2Q86WA8 852 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 SPATA18Q8TC71 538 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 KCNV2Q8TDN2 545 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 TRAPPC12Q8WVT3 735 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 INPP5DQ92835 1189 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 ZBTB10Q96DT7 871 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 INO80BQ9C086 356 aaPredicted RBP11.78□□□□□ -0.52
VARS2-213ENST00000625423 PHACTR1Q9C0D0 580 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 NKX1-2Q9UD57 310 aaPredicted RBP11.78□□□□□ -0.52
VARS2-213ENST00000625423 SIX4Q9UIU6 781 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 MCF2LO15068 1137 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 B4GALT4O60513 344 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 ECM2O94769 699 aaPredicted RBP11.78□□□□□ -0.52
VARS2-213ENST00000625423 EPHB2P29323 1055 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 ZNF667Q5HYK9 610 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 METTL7BQ6UX53 244 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 TSHZ1Q6ZSZ6 1077 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 ZC3H18Q86VM9 953 aaKnown RBP11.78□□□□□ -0.52
VARS2-213ENST00000625423 SLC4A11Q8NBS3 891 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 FAM13CQ8NE31 585 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 RFWD2Q8NHY2 731 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 SMYD3Q9H7B4 428 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 PTPRHQ9HD43 1115 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 USP18Q9UMW8 372 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 ZBTB42B2RXF5 422 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 C2CD2LO14523 706 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 WFS1O76024 890 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 RNF8O76064 485 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 ARIH2O95376 493 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 TRUB2O95900 331 aaKnown RBP11.78□□□□□ -0.52
VARS2-213ENST00000625423 PROZP22891 400 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 ELK3P41970 407 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 HSDL1Q3SXM5 330 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 SLC45A4Q5BKX6 768 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 ZC3H12AQ5D1E8 599 aaKnown RBP11.78□□□□□ -0.52
VARS2-213ENST00000625423 SH3PXD2AQ5TCZ1 1133 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 DPH6Q7L8W6 267 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 NCAPG2Q86XI2 1143 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 CMASQ8NFW8 434 aaPredicted RBP11.78□□□□□ -0.52
VARS2-213ENST00000625423 PTPRN2Q92932 1015 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 MIEF2Q96C03 454 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 MANSC1Q9H8J5 431 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 KANSL3Q9P2N6 904 aa11.78□□□□□ -0.52
VARS2-213ENST00000625423 PIK3R2O00459 728 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 TM9SF1O15321 606 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 MT-ND3P03897 115 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 NFICP08651 508 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 TROVE2P10155 538 aaKnown RBP eCLIP11.77□□□□□ -0.53
VARS2-213ENST00000625423 EDNRBP24530 442 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 RAB6CQ53S08 254 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 ANKRD20A2Q5SQ80 823 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 ANKRD20A1Q5TYW2 823 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 ANKRD20A3Q5VUR7 823 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 LBX2Q6XYB7 198 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 LRRC6Q86X45 466 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 C1orf127Q8N9H9 656 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 FAM167AQ96KS9 214 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 ELOVL4Q9GZR5 314 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 MAF1Q9H063 256 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 RAB6CQ9H0N0 254 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 WDR35Q9P2L0 1181 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 M0QYV0 167 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 ACKR2O00590 384 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 MICAL2O94851 1124 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 GM2AP17900 193 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 PTPN11Q06124 597 aaPredicted RBP11.77□□□□□ -0.53
VARS2-213ENST00000625423 PTK7Q13308 1070 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 FAM102AQ5T9C2 384 aaPredicted RBP11.77□□□□□ -0.53
VARS2-213ENST00000625423 DARS2Q6PI48 645 aaKnown RBP11.77□□□□□ -0.53
VARS2-213ENST00000625423 SERAC1Q96JX3 654 aa11.77□□□□□ -0.53
VARS2-213ENST00000625423 PEBP4Q96S96 227 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms