RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 TTC30AQ86WT1 665 aa20.69■□□□□ 0.9
PCDHB11-202ENST00000624887 NME8Q8N427 588 aa20.69■□□□□ 0.9
PCDHB11-202ENST00000624887 KCTD6Q8NC69 237 aa20.69■□□□□ 0.9
PCDHB11-202ENST00000624887 RXFP2Q8WXD0 754 aa20.69■□□□□ 0.9
PCDHB11-202ENST00000624887 SOCS4Q8WXH5 440 aa20.69■□□□□ 0.9
PCDHB11-202ENST00000624887 PWWP2AQ96N64 755 aa20.69■□□□□ 0.9
PCDHB11-202ENST00000624887 DNAJC17Q9NVM6 304 aaKnown RBP20.69■□□□□ 0.9
PCDHB11-202ENST00000624887 SMIM28A0A1B0GU29 152 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 PIRO00625 290 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 ZSCAN5DPP0CG00 497 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 PDGFRAP16234 1089 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 TM4SF4P48230 202 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 IFI35P80217 286 aaPredicted RBP20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 PLCB3Q01970 1234 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 KYNUQ16719 465 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 UBXN11Q5T124 520 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 TRNP1Q6NT89 227 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 PMF1Q6P1K2 205 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 ACTL9Q8TC94 416 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 TMEM121Q9BTD3 319 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 APOL6Q9BWW8 343 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 SLC4A5Q9BY07 1137 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 PCDH9Q9HC56 1237 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 NINJ2Q9NZG7 142 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 PIK3R2O00459 728 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 CD48P09326 243 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 ETS1P14921 441 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 KCNE1P15382 129 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 MMP13P45452 471 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 SLCO1A2P46721 670 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 OTUD4Q01804 1114 aaKnown RBP20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 CRHR2Q13324 411 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 FSCN1Q16658 493 aaKnown RBP20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 FBXO47Q5MNV8 452 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 ARHGAP17Q68EM7 881 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 TMEM110Q86TL2 294 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 OR6B3Q8NGW1 331 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 SLC35F5Q8WV83 523 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 PIWIL1Q96J94 861 aaKnown RBP20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 SERPINB12Q96P63 405 aa20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 TPX2Q9ULW0 747 aaKnown RBP20.68■□□□□ 0.9
PCDHB11-202ENST00000624887 XPOTO43592 962 aaKnown RBP20.67■□□□□ 0.9
PCDHB11-202ENST00000624887 GNAT1P11488 350 aa20.67■□□□□ 0.9
PCDHB11-202ENST00000624887 RGS7P49802 495 aa20.67■□□□□ 0.9
PCDHB11-202ENST00000624887 DYNLT1P63172 113 aa20.67■□□□□ 0.9
PCDHB11-202ENST00000624887 PURAQ00577 322 aaKnown RBP20.67■□□□□ 0.9
PCDHB11-202ENST00000624887 GPS1Q13098 491 aa20.67■□□□□ 0.9
PCDHB11-202ENST00000624887 TAF5Q15542 800 aa20.67■□□□□ 0.9
PCDHB11-202ENST00000624887 OLFML1Q6UWY5 402 aa20.67■□□□□ 0.9
PCDHB11-202ENST00000624887 STK32AQ8WU08 396 aa20.67■□□□□ 0.9
PCDHB11-202ENST00000624887 PEBP4Q96S96 227 aa20.67■□□□□ 0.9
PCDHB11-202ENST00000624887 ZIC5Q96T25 663 aa20.67■□□□□ 0.9
PCDHB11-202ENST00000624887 FAM49BQ9NUQ9 324 aa20.67■□□□□ 0.9
PCDHB11-202ENST00000624887 RNF19AQ9NV58 838 aa20.67■□□□□ 0.9
PCDHB11-202ENST00000624887 HESX1Q9UBX0 185 aa20.67■□□□□ 0.9
PCDHB11-202ENST00000624887 SGK1O00141 431 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 EBAG9O00559 213 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 NDC80O14777 642 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 TRAPPC3O43617 180 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 TCEA3O75764 348 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 ENDOD1O94919 500 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 SEC24CP53992 1094 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 MORF4L2Q15014 288 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 SH3PXD2AQ5TCZ1 1133 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 CYP4V2Q6ZWL3 525 aaPredicted RBP20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 NLRP14Q86W24 1093 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 MYCBPAPQ8TBZ2 947 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 HSPH1Q92598 858 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 CENPTQ96BT3 561 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 ZNF560Q96MR9 790 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 RBM15Q96T37 977 aaKnown RBP eCLIP20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 RNF39Q9H2S5 420 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 PPANQ9NQ55 473 aaKnown RBP20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 GDAP2Q9NXN4 497 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 KLK14Q9P0G3 267 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 SAE1Q9UBE0 346 aaPredicted RBP20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 A8MXQ7 604 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 E7EVH7 732 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 DPYSL4O14531 572 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 FAM107AO95990 144 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 PNPLA4P41247 253 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 SNX16P57768 344 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 LONRF1Q17RB8 773 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 SRLQ86TD4 932 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 C7orf31Q8N865 590 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 CCT8L2Q96SF2 557 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 RSAD1Q9HA92 442 aa20.66■□□□□ 0.9
PCDHB11-202ENST00000624887 GMNCA6NCL1 334 aa20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 KPNA7A9QM74 516 aa20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 APOC4-APOC2K7ER74 178 aa20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 TNPO2O14787 897 aaKnown RBP20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 APOC2P02655 101 aa20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 PSMC4P43686 418 aa20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 SLC6A3Q01959 620 aa20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 C15orf59Q2T9L4 293 aaPredicted RBP20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 CCDC14Q49A88 953 aa20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 SESTD1Q86VW0 696 aa20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 RFX6Q8HWS3 928 aa20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 CRYBG2Q8N1P7 616 aa20.65■□□□□ 0.9
PCDHB11-202ENST00000624887 KBTBD7Q8WVZ9 684 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms