RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 CCDC144AA2RUR9 1427 aa6.28□□□□□ -1.4
VPS29-212ENST00000621131 ZNF213O14771 459 aa6.28□□□□□ -1.4
VPS29-212ENST00000621131 NXPH3O95157 252 aa6.28□□□□□ -1.4
VPS29-212ENST00000621131 IBSPP21815 317 aaPredicted RBP6.28□□□□□ -1.4
VPS29-212ENST00000621131 ALDH9A1P49189 494 aa6.28□□□□□ -1.4
VPS29-212ENST00000621131 KRTAP10-11P60412 298 aa6.28□□□□□ -1.4
VPS29-212ENST00000621131 EIF2B5Q13144 721 aaKnown RBP6.28□□□□□ -1.4
VPS29-212ENST00000621131 IQCB1Q15051 598 aa6.28□□□□□ -1.4
VPS29-212ENST00000621131 AMOTQ4VCS5 1084 aa6.28□□□□□ -1.4
VPS29-212ENST00000621131 KHDC1LQ5JSQ8 128 aa6.28□□□□□ -1.4
VPS29-212ENST00000621131 MAVSQ7Z434 540 aa6.28□□□□□ -1.4
VPS29-212ENST00000621131 GRAMD1CQ8IYS0 662 aa6.28□□□□□ -1.4
VPS29-212ENST00000621131 PCSK9Q8NBP7 692 aaKnown RBP6.28□□□□□ -1.4
VPS29-212ENST00000621131 REPS1Q96D71 796 aa6.28□□□□□ -1.4
VPS29-212ENST00000621131 PTDSS2Q9BVG9 487 aa6.28□□□□□ -1.4
VPS29-212ENST00000621131 DLL3Q9NYJ7 618 aa6.28□□□□□ -1.4
VPS29-212ENST00000621131 FLRT1Q9NZU1 646 aa6.28□□□□□ -1.4
VPS29-212ENST00000621131 PLEKHM1Q9Y4G2 1056 aa6.28□□□□□ -1.4
VPS29-212ENST00000621131 PRDM15P57071 1507 aaPredicted RBP6.28□□□□□ -1.4
VPS29-212ENST00000621131 DHX29Q7Z478 1369 aaKnown RBP6.28□□□□□ -1.4
VPS29-212ENST00000621131 A2MP01023 1474 aa6.28□□□□□ -1.4
VPS29-212ENST00000621131 MLH3Q9UHC1 1453 aa6.28□□□□□ -1.4
VPS29-212ENST00000621131 LINC01548A6NM66 108 aa6.27□□□□□ -1.41
VPS29-212ENST00000621131 SLC16A3O15427 465 aaKnown RBP6.27□□□□□ -1.41
VPS29-212ENST00000621131 UNC5CO95185 931 aa6.27□□□□□ -1.41
VPS29-212ENST00000621131 ATXN1LP0C7T5 689 aaKnown RBP6.27□□□□□ -1.41
VPS29-212ENST00000621131 NDUFB7P17568 137 aa6.27□□□□□ -1.41
VPS29-212ENST00000621131 LIPAP38571 399 aa6.27□□□□□ -1.41
VPS29-212ENST00000621131 TEDDM1Q5T9Z0 273 aa6.27□□□□□ -1.41
VPS29-212ENST00000621131 ANKRD16Q6P6B7 361 aa6.27□□□□□ -1.41
VPS29-212ENST00000621131 SARS2Q9NP81 518 aaKnown RBP6.27□□□□□ -1.41
VPS29-212ENST00000621131 RGS17Q9UGC6 210 aaPredicted RBP6.27□□□□□ -1.41
VPS29-212ENST00000621131 SERTAD3Q9UJW9 196 aa6.27□□□□□ -1.41
VPS29-212ENST00000621131 STXBP5LQ9Y2K9 1186 aa6.27□□□□□ -1.41
VPS29-212ENST00000621131 RNF17Q9BXT8 1623 aaKnown RBP6.27□□□□□ -1.41
VPS29-212ENST00000621131 ZC3H13Q5T200 1668 aaKnown RBP6.26□□□□□ -1.41
VPS29-212ENST00000621131 ABCA6Q8N139 1617 aa6.26□□□□□ -1.41
VPS29-212ENST00000621131 SPHKAPQ2M3C7 1700 aa6.26□□□□□ -1.41
VPS29-212ENST00000621131 A0A088AWK7 358 aa6.26□□□□□ -1.41
VPS29-212ENST00000621131 TLR5O60602 858 aa6.26□□□□□ -1.41
VPS29-212ENST00000621131 ALDH1L1O75891 902 aa6.26□□□□□ -1.41
VPS29-212ENST00000621131 LATS1O95835 1130 aa6.26□□□□□ -1.41
VPS29-212ENST00000621131 ERBB2P04626 1255 aa6.26□□□□□ -1.41
VPS29-212ENST00000621131 LOXL3P58215 753 aa6.26□□□□□ -1.41
VPS29-212ENST00000621131 LILRA4P59901 499 aa6.26□□□□□ -1.41
VPS29-212ENST00000621131 ZNF267Q14586 743 aaPredicted RBP6.26□□□□□ -1.41
VPS29-212ENST00000621131 LLGL1Q15334 1064 aa6.26□□□□□ -1.41
VPS29-212ENST00000621131 AARS2Q5JTZ9 985 aaKnown RBP6.26□□□□□ -1.41
VPS29-212ENST00000621131 SUMO4Q6EEV6 95 aa6.26□□□□□ -1.41
VPS29-212ENST00000621131 CEP85Q6P2H3 762 aa6.26□□□□□ -1.41
VPS29-212ENST00000621131 LAYNQ6UX15 382 aa6.26□□□□□ -1.41
VPS29-212ENST00000621131 ZNF782Q6ZMW2 699 aaPredicted RBP6.26□□□□□ -1.41
VPS29-212ENST00000621131 C1QL2Q7Z5L3 287 aa6.26□□□□□ -1.41
VPS29-212ENST00000621131 STAG1Q8WVM7 1258 aa6.26□□□□□ -1.41
VPS29-212ENST00000621131 TBC1D5Q92609 795 aa6.26□□□□□ -1.41
VPS29-212ENST00000621131 MRGPRX1Q96LB2 322 aa6.26□□□□□ -1.41
VPS29-212ENST00000621131 C1QTNF7Q9BXJ2 289 aa6.26□□□□□ -1.41
VPS29-212ENST00000621131 RHOBTB2Q9BYZ6 727 aa6.26□□□□□ -1.41
VPS29-212ENST00000621131 ARMT1Q9H993 441 aa6.26□□□□□ -1.41
VPS29-212ENST00000621131 TYW1Q9NV66 732 aaKnown RBP6.26□□□□□ -1.41
VPS29-212ENST00000621131 SH2B3Q9UQQ2 575 aa6.26□□□□□ -1.41
VPS29-212ENST00000621131 ALKQ9UM73 1620 aa6.25□□□□□ -1.41
VPS29-212ENST00000621131 H0YIZ8 118 aa6.25□□□□□ -1.41
VPS29-212ENST00000621131 OFD1O75665 1012 aa6.25□□□□□ -1.41
VPS29-212ENST00000621131 JTBO76095 146 aa6.25□□□□□ -1.41
VPS29-212ENST00000621131 GRPP07492 148 aa6.25□□□□□ -1.41
VPS29-212ENST00000621131 IL6RP08887 468 aaPredicted RBP6.25□□□□□ -1.41
VPS29-212ENST00000621131 PPIFP30405 207 aaKnown RBP6.25□□□□□ -1.41
VPS29-212ENST00000621131 KCNJ5P48544 419 aa6.25□□□□□ -1.41
VPS29-212ENST00000621131 PXNP49023 591 aaPredicted RBP6.25□□□□□ -1.41
VPS29-212ENST00000621131 SSBP2P81877 361 aaPredicted RBP6.25□□□□□ -1.41
VPS29-212ENST00000621131 MCL1Q07820 350 aa6.25□□□□□ -1.41
VPS29-212ENST00000621131 SLC10A2Q12908 348 aaPredicted RBP6.25□□□□□ -1.41
VPS29-212ENST00000621131 PROSER3Q2NL68 480 aa6.25□□□□□ -1.41
VPS29-212ENST00000621131 TREML2Q5T2D2 321 aa6.25□□□□□ -1.41
VPS29-212ENST00000621131 WDR53Q7Z5U6 358 aaPredicted RBP6.25□□□□□ -1.41
VPS29-212ENST00000621131 GLCCI1Q86VQ1 547 aa6.25□□□□□ -1.41
VPS29-212ENST00000621131 DIS3LQ8TF46 1054 aaKnown RBP6.25□□□□□ -1.41
VPS29-212ENST00000621131 SLC29A3Q9BZD2 475 aa6.25□□□□□ -1.41
VPS29-212ENST00000621131 RNF7Q9UBF6 113 aa6.25□□□□□ -1.41
VPS29-212ENST00000621131 XPR1Q9UBH6 696 aa6.25□□□□□ -1.41
VPS29-212ENST00000621131 PNMA8BQ9ULN7 279 aaPredicted RBP6.25□□□□□ -1.41
VPS29-212ENST00000621131 MED16Q9Y2X0 877 aa6.25□□□□□ -1.41
VPS29-212ENST00000621131 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.25□□□□□ -1.41
VPS29-212ENST00000621131 CEP152O94986 1710 aa6.25□□□□□ -1.41
VPS29-212ENST00000621131 TRPM2O94759 1503 aa6.25□□□□□ -1.41
VPS29-212ENST00000621131 E9PCH4 1651 aa6.24□□□□□ -1.41
VPS29-212ENST00000621131 VWDEQ8N2E2 1590 aa6.24□□□□□ -1.41
VPS29-212ENST00000621131 DIP2CQ9Y2E4 1556 aa6.24□□□□□ -1.41
VPS29-212ENST00000621131 ATP10AO60312 1499 aa6.24□□□□□ -1.41
VPS29-212ENST00000621131 ANKRD62A6NC57 917 aa6.24□□□□□ -1.41
VPS29-212ENST00000621131 KIF3BO15066 747 aa6.24□□□□□ -1.41
VPS29-212ENST00000621131 AP1G1O43747 822 aa6.24□□□□□ -1.41
VPS29-212ENST00000621131 ONECUT2O95948 504 aa6.24□□□□□ -1.41
VPS29-212ENST00000621131 NHLRC4P0CG21 123 aaPredicted RBP6.24□□□□□ -1.41
VPS29-212ENST00000621131 CYP2C18P33260 490 aa6.24□□□□□ -1.41
VPS29-212ENST00000621131 VIPR2P41587 438 aa6.24□□□□□ -1.41
VPS29-212ENST00000621131 GRM1Q13255 1194 aa6.24□□□□□ -1.41
VPS29-212ENST00000621131 FGL2Q14314 439 aa6.24□□□□□ -1.41
VPS29-212ENST00000621131 TMEM119Q4V9L6 283 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms