RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 MAPK7Q13164 816 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 PSMD2Q13200 908 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 DMP1Q13316 513 aaPredicted RBP4.94□□□□□ -1.62
SNCA-213ENST00000618500 TOB2Q14106 344 aaPredicted RBP4.94□□□□□ -1.62
SNCA-213ENST00000618500 PDIA5Q14554 519 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 SV2CQ496J9 727 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 C9orf57Q5W0N0 161 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 LARP1BQ659C4 914 aaKnown RBP4.94□□□□□ -1.62
SNCA-213ENST00000618500 NUDT18Q6ZVK8 323 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 CDR2LQ86X02 465 aaPredicted RBP4.94□□□□□ -1.62
SNCA-213ENST00000618500 C1orf216Q8TAB5 229 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 TTC9Q92623 222 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 SLKQ9H2G2 1235 aaPredicted RBP4.94□□□□□ -1.62
SNCA-213ENST00000618500 SLC24A3Q9HC58 644 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 ANO2Q9NQ90 1003 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 SNX14Q9Y5W7 946 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 STYXL1Q9Y6J8 313 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 CACNA1GO43497 2377 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 RRP8O43159 456 aaKnown RBP4.94□□□□□ -1.62
SNCA-213ENST00000618500 MLLT3P42568 568 aaPredicted RBP4.94□□□□□ -1.62
SNCA-213ENST00000618500 GAD2Q05329 585 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 ZNF33AQ06730 810 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 TRIM68Q6AZZ1 485 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 ANO7Q6IWH7 933 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 DSTYKQ6XUX3 929 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 MARVELD3Q96A59 401 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 HVCN1Q96D96 273 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 SENP8Q96LD8 212 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 ZNF560Q96MR9 790 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 TPSD1Q9BZJ3 242 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 ST6GALNAC4Q9H4F1 302 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 GDAP2Q9NXN4 497 aa4.94□□□□□ -1.62
SNCA-213ENST00000618500 A0A1W2PQF6 199 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 TCRBV21S2A2A0A5A6 115 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 B8ZZF3 427 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 SGK1O00141 431 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 KAT7O95251 611 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 OAS1P00973 400 aaKnown RBP4.93□□□□□ -1.62
SNCA-213ENST00000618500 ACTN2P35609 894 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 HNF1BP35680 557 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 GRK6P43250 576 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 TRAPPC10P48553 1259 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 RPL6Q02878 288 aaKnown RBP4.93□□□□□ -1.62
SNCA-213ENST00000618500 RESTQ13127 1097 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 SLC39A12Q504Y0 691 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 FAM171BQ6P995 826 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 VSTM1Q6UX27 236 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 RUFY3Q7L099 469 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 DAW1Q8N136 415 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 TTC9BQ8N6N2 239 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 LRRC52Q8N7C0 313 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 PDZD8Q8NEN9 1154 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 MDM1Q8TC05 714 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 DPH1Q9BZG8 443 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 CPSF3Q9UKF6 684 aaKnown RBP4.93□□□□□ -1.62
SNCA-213ENST00000618500 PKD1L2Q7Z442 2459 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 GPR179Q6PRD1 2367 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 LAD1O00515 517 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 OGTO15294 1046 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 IL18RAPO95256 599 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 CFIP05156 583 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 ADH5P11766 374 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 C6P13671 934 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 PLS3P13797 630 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 CD6P30203 668 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 NTSR1P30989 418 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 GRIA4P48058 902 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 TMPRSS3P57727 454 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 BNC1Q01954 994 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 DHCR24Q15392 516 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 TBC1D25Q3MII6 688 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 INTS6LQ5JSJ4 861 aaKnown RBP4.93□□□□□ -1.62
SNCA-213ENST00000618500 SMYD5Q6GMV2 418 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 FBXL19Q6PCT2 694 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 ZNF276Q8N554 614 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 TOP6BLQ8N6T0 577 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 TXNDC5Q8NBS9 432 aaKnown RBP4.93□□□□□ -1.62
SNCA-213ENST00000618500 TMEM161BQ8NDZ6 487 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 TTC8Q8TAM2 541 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 SH3RF2Q8TEC5 729 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 TSC1Q92574 1164 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 IGSF8Q969P0 613 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 GRAMD1AQ96CP6 724 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 MED8Q96G25 268 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 ITM2CQ9NQX7 267 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 AKAP13Q12802 2813 aa4.93□□□□□ -1.62
SNCA-213ENST00000618500 MYLKQ15746 1914 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 TRABD2BA6NFA1 517 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 LEFTY2O00292 366 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 GABRDO14764 452 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 TRIM66O15016 1216 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 PFKFB2O60825 505 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 PRPHP41219 470 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 TAF6P49848 677 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 EMP3P54852 163 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 SKOR1P84550 965 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 TSPY1Q01534 308 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 KCNC4Q03721 635 aa4.92□□□□□ -1.62
SNCA-213ENST00000618500 GRIN1Q05586 938 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms