RNA–Protein interactions for RNA: ENST00000617799.1

SBDS-205, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBDS, Length 953 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-205ENST00000617799 TMC8Q8IU68 726 aa18.18■□□□□ 0.5
SBDS-205ENST00000617799 SPATA17Q96L03 361 aa18.18■□□□□ 0.5
SBDS-205ENST00000617799 MYADMQ96S97 322 aa18.18■□□□□ 0.5
SBDS-205ENST00000617799 KCNK16Q96T55 309 aa18.18■□□□□ 0.5
SBDS-205ENST00000617799 NUCKS1Q9H1E3 243 aaKnown RBP18.18■□□□□ 0.5
SBDS-205ENST00000617799 AVENQ9NQS1 362 aaPredicted RBP18.18■□□□□ 0.5
SBDS-205ENST00000617799 TMEM30AQ9NV96 361 aa18.18■□□□□ 0.5
SBDS-205ENST00000617799 UXTQ9UBK9 157 aaPredicted RBP18.18■□□□□ 0.5
SBDS-205ENST00000617799 HESX1Q9UBX0 185 aa18.18■□□□□ 0.5
SBDS-205ENST00000617799 AJAP1Q9UKB5 411 aaPredicted RBP18.18■□□□□ 0.5
SBDS-205ENST00000617799 CDH7Q9ULB5 785 aa18.18■□□□□ 0.5
SBDS-205ENST00000617799 KIAA1257Q9ULG3 409 aa18.18■□□□□ 0.5
SBDS-205ENST00000617799 MYO6Q9UM54 1294 aa18.18■□□□□ 0.5
SBDS-205ENST00000617799 FHOD1Q9Y613 1164 aa18.18■□□□□ 0.5
SBDS-205ENST00000617799 MYH10P35580 1976 aa18.17■□□□□ 0.5
SBDS-205ENST00000617799 RNF225M0QZC1 329 aaPredicted RBP18.17■□□□□ 0.5
SBDS-205ENST00000617799 NOL4O94818 638 aa18.17■□□□□ 0.5
SBDS-205ENST00000617799 TPM1P09493 284 aa18.17■□□□□ 0.5
SBDS-205ENST00000617799 CDC25CP30307 473 aa18.17■□□□□ 0.5
SBDS-205ENST00000617799 CCR2P41597 374 aa18.17■□□□□ 0.5
SBDS-205ENST00000617799 EPHA5P54756 1037 aa18.17■□□□□ 0.5
SBDS-205ENST00000617799 PLCB2Q00722 1185 aa18.17■□□□□ 0.5
SBDS-205ENST00000617799 TEAD2Q15562 447 aa18.17■□□□□ 0.5
SBDS-205ENST00000617799 ARHGAP15Q53QZ3 475 aa18.17■□□□□ 0.5
SBDS-205ENST00000617799 PRSS36Q5K4E3 855 aa18.17■□□□□ 0.5
SBDS-205ENST00000617799 ARHGAP17Q68EM7 881 aa18.17■□□□□ 0.5
SBDS-205ENST00000617799 GJD3Q8N144 294 aa18.17■□□□□ 0.5
SBDS-205ENST00000617799 PLCD3Q8N3E9 789 aa18.17■□□□□ 0.5
SBDS-205ENST00000617799 ANP32BQ92688 251 aaKnown RBP18.17■□□□□ 0.5
SBDS-205ENST00000617799 FGF13Q92913 245 aa18.17■□□□□ 0.5
SBDS-205ENST00000617799 MRFAP1L1Q96HT8 127 aa18.17■□□□□ 0.5
SBDS-205ENST00000617799 CEP295NLQ96MC4 621 aa18.17■□□□□ 0.5
SBDS-205ENST00000617799 SMOQ99835 787 aa18.17■□□□□ 0.5
SBDS-205ENST00000617799 ATXN3LQ9H3M9 355 aa18.17■□□□□ 0.5
SBDS-205ENST00000617799 SIK3Q9Y2K2 1263 aa18.17■□□□□ 0.5
SBDS-205ENST00000617799 DOCK6Q96HP0 2047 aa18.16■□□□□ 0.5
SBDS-205ENST00000617799 LOC730098B7Z3J9 87 aa18.16■□□□□ 0.5
SBDS-205ENST00000617799 BEST1O76090 585 aa18.16■□□□□ 0.5
SBDS-205ENST00000617799 CALCAP01258 141 aa18.16■□□□□ 0.5
SBDS-205ENST00000617799 CCDC172P0C7W6 258 aa18.16■□□□□ 0.5
SBDS-205ENST00000617799 UCHL3P15374 230 aa18.16■□□□□ 0.5
SBDS-205ENST00000617799 HMGA1P17096 107 aaKnown RBP18.16■□□□□ 0.5
SBDS-205ENST00000617799 NPR3P17342 541 aa18.16■□□□□ 0.5
SBDS-205ENST00000617799 BRD2P25440 801 aaKnown RBP18.16■□□□□ 0.5
SBDS-205ENST00000617799 ZNF132P52740 706 aa18.16■□□□□ 0.5
SBDS-205ENST00000617799 POLR2FP61218 127 aaKnown RBP18.16■□□□□ 0.5
SBDS-205ENST00000617799 CLEC20AQ6ZU45 233 aa18.16■□□□□ 0.5
SBDS-205ENST00000617799 NPAS3Q8IXF0 933 aa18.16■□□□□ 0.5
SBDS-205ENST00000617799 NUP93Q8N1F7 819 aa18.16■□□□□ 0.5
SBDS-205ENST00000617799 ZNF397Q8NF99 534 aaPredicted RBP18.16■□□□□ 0.5
SBDS-205ENST00000617799 SHKBP1Q8TBC3 707 aa18.16■□□□□ 0.5
SBDS-205ENST00000617799 SHC3Q92529 594 aa18.16■□□□□ 0.5
SBDS-205ENST00000617799 MCRS1Q96EZ8 462 aa18.16■□□□□ 0.5
SBDS-205ENST00000617799 TRMT2BQ96GJ1 504 aaKnown RBP18.16■□□□□ 0.5
SBDS-205ENST00000617799 NAP1L5Q96NT1 182 aaPredicted RBP18.16■□□□□ 0.5
SBDS-205ENST00000617799 LRRC3Q9BY71 257 aa18.16■□□□□ 0.5
SBDS-205ENST00000617799 XPO4Q9C0E2 1151 aaKnown RBP18.16■□□□□ 0.5
SBDS-205ENST00000617799 TSPAN16Q9UKR8 245 aa18.16■□□□□ 0.5
SBDS-205ENST00000617799 ZFP37Q9Y6Q3 630 aaPredicted RBP18.16■□□□□ 0.5
SBDS-205ENST00000617799 NOTCH4Q99466 2003 aa18.15■□□□□ 0.5
SBDS-205ENST00000617799 C19orf67A6NJJ6 358 aa18.15■□□□□ 0.5
SBDS-205ENST00000617799 O00370 1275 aa18.15■□□□□ 0.5
SBDS-205ENST00000617799 THAP12O43422 761 aa18.15■□□□□ 0.5
SBDS-205ENST00000617799 RTN3O95197 1032 aaPredicted RBP18.15■□□□□ 0.5
SBDS-205ENST00000617799 GNA15P30679 374 aa18.15■□□□□ 0.5
SBDS-205ENST00000617799 MRE11P49959 708 aa18.15■□□□□ 0.5
SBDS-205ENST00000617799 SLC5A3P53794 718 aa18.15■□□□□ 0.5
SBDS-205ENST00000617799 BCAT1P54687 386 aa18.15■□□□□ 0.5
SBDS-205ENST00000617799 CYP4F8P98187 520 aa18.15■□□□□ 0.5
SBDS-205ENST00000617799 STILQ15468 1287 aa18.15■□□□□ 0.5
SBDS-205ENST00000617799 SPECC1LQ69YQ0 1117 aa18.15■□□□□ 0.5
SBDS-205ENST00000617799 GAREM2Q75VX8 874 aa18.15■□□□□ 0.5
SBDS-205ENST00000617799 ZDHHC14Q8IZN3 488 aa18.15■□□□□ 0.5
SBDS-205ENST00000617799 ANKRD52Q8NB46 1076 aa18.15■□□□□ 0.5
SBDS-205ENST00000617799 TFAP2BQ92481 460 aa18.15■□□□□ 0.5
SBDS-205ENST00000617799 DUSP16Q9BY84 665 aa18.15■□□□□ 0.5
SBDS-205ENST00000617799 CSNK1G1Q9HCP0 422 aa18.15■□□□□ 0.5
SBDS-205ENST00000617799 LIMD1Q9UGP4 676 aa18.15■□□□□ 0.5
SBDS-205ENST00000617799 CNTN6Q9UQ52 1028 aa18.15■□□□□ 0.5
SBDS-205ENST00000617799 VCANP13611 3396 aa18.14■□□□□ 0.5
SBDS-205ENST00000617799 A0A1W2PQJ5 194 aa18.14■□□□□ 0.49
SBDS-205ENST00000617799 GOLGA6L6A8MZA4 724 aa18.14■□□□□ 0.49
SBDS-205ENST00000617799 M0QYV0 167 aa18.14■□□□□ 0.49
SBDS-205ENST00000617799 CYP26A1O43174 497 aa18.14■□□□□ 0.49
SBDS-205ENST00000617799 TEX33O43247 280 aa18.14■□□□□ 0.49
SBDS-205ENST00000617799 MED7O43513 233 aa18.14■□□□□ 0.49
SBDS-205ENST00000617799 MICAL2O94851 1124 aa18.14■□□□□ 0.49
SBDS-205ENST00000617799 PNMA6AP0CW24 399 aaPredicted RBP18.14■□□□□ 0.49
SBDS-205ENST00000617799 LAMP2P13473 410 aa18.14■□□□□ 0.49
SBDS-205ENST00000617799 YWHAQP27348 245 aa18.14■□□□□ 0.49
SBDS-205ENST00000617799 BPIFB4P59827 614 aa18.14■□□□□ 0.49
SBDS-205ENST00000617799 USP46P62068 366 aa18.14■□□□□ 0.49
SBDS-205ENST00000617799 DRAP1Q14919 205 aaPredicted RBP18.14■□□□□ 0.49
SBDS-205ENST00000617799 GPR158Q5T848 1215 aa18.14■□□□□ 0.49
SBDS-205ENST00000617799 CACNA2D4Q7Z3S7 1137 aa18.14■□□□□ 0.49
SBDS-205ENST00000617799 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.14■□□□□ 0.49
SBDS-205ENST00000617799 ZMIZ2Q8NF64 920 aa18.14■□□□□ 0.49
SBDS-205ENST00000617799 UBA3Q8TBC4 463 aa18.14■□□□□ 0.49
SBDS-205ENST00000617799 MRPS31Q92665 395 aaKnown RBP18.14■□□□□ 0.49
SBDS-205ENST00000617799 MYRFLQ96LU7 910 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms