RNA–Protein interactions for RNA: ENST00000617556.4

CYFIP1-207, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene CYFIP1, Length 5,674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-207ENST00000617556 MRPL40Q9NQ50 206 aaKnown RBP12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 GLTPD2A6NH11 291 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 GNGT2O14610 69 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 MSCO60682 206 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 URODP06132 367 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 GHRP10912 638 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 CHN1P15882 459 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 TKTL1P51854 596 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 GEMP55040 296 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 SATB1Q01826 763 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 PCSK7Q16549 785 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 OVOS1Q6IE37 1185 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 TIGD7Q6NT04 549 aaPredicted RBP12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 DDX53Q86TM3 631 aaKnown RBP12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 NOP9Q86U38 636 aaKnown RBP12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 INPP4AQ96PE3 977 aaPredicted RBP12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 UMODL1Q5DID0 1318 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 PRKCIP41743 596 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 BEX3Q00994 111 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 OTUD4Q01804 1114 aaKnown RBP12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 ITGB3BPQ13352 177 aaPredicted RBP12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 PAN2Q504Q3 1202 aaKnown RBP12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 RABGAP1LQ5R372 815 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 MTMR8Q96EF0 704 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 STAMBPL1Q96FJ0 436 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 TBCBQ99426 244 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 PRMT1Q99873 361 aaKnown RBP12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 WWP1Q9H0M0 922 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 USP20Q9Y2K6 914 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 SLC30A1Q9Y6M5 507 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 TISP43B9A030 160 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 F5H5T6 163 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 ONECUT3O60422 494 aaPredicted RBP12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 DNAJC6O75061 913 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 MICAL2O94851 1124 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 EIF4BP23588 611 aaKnown RBP12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 MKRN4PQ13434 485 aaPredicted RBP12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 USP10Q14694 798 aaKnown RBP12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 TMTC4Q5T4D3 741 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 ANKRD23Q86SG2 305 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 CCNJLQ8IV13 435 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 OR2W6PQ8NHA6 318 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 GBP5Q96PP8 586 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 GOLGA8RI6L899 631 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 LMNAP02545 664 aaKnown RBP12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 PPP3CAQ08209 521 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 ZNF177Q13360 481 aaPredicted RBP12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 PDAP1Q13442 181 aaKnown RBP12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 MIIPQ5JXC2 388 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 ATG4AQ8WYN0 398 aa12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 RPRD1AQ96P16 312 aaPredicted RBP12.75□□□□□ -0.37
CYFIP1-207ENST00000617556 OPHN1O60890 802 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 NDUFS3O75489 264 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 POMCP01189 267 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 SMIM10L2AP0DMW4 78 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 SMIM10L2BP0DMW5 78 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 KPNA1P52294 538 aaPredicted RBP12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 GEMIN4P57678 1058 aaKnown RBP12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 TRADDQ15628 312 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 SH2D3CQ8N5H7 860 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 GIPC2Q8TF65 315 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 ELMO2Q96JJ3 720 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 SERPINB12Q96P63 405 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 EPN3Q9H201 632 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 PHRF1Q9P1Y6 1649 aaKnown RBP12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 WNT7AO00755 349 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 HSD17B3P37058 310 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 CAPSQ13938 189 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 EMC1Q8N766 993 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 SPATA20Q8TB22 786 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 HASPINQ8TF76 798 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 CINPQ9BW66 212 aaPredicted RBP12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 MRPL9Q9BYD2 267 aaKnown RBP12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 PABPC3Q9H361 631 aaKnown RBP12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 TCP11X1B4DZS4 312 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 TLR2O60603 784 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 USP2O75604 605 aaPredicted RBP12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 HMGCRP04035 888 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 ATN1P54259 1190 aaPredicted RBP12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 HNRNPH2P55795 449 aaKnown RBP12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 SLC29A2Q14542 456 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 TTC30AQ86WT1 665 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 SLC25A41Q8N5S1 370 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 CDK5RAP1Q96SZ6 601 aaKnown RBP12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 PNKPQ96T60 521 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 TRPM5Q9NZQ8 1165 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 AAR2Q9Y312 384 aaKnown RBP12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 LOC102724159A0A0B4J2E5 919 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 ADRB2P07550 413 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 PWP2Q15269 919 aaKnown RBP12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 SPATA21Q7Z572 469 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 SMARCD1Q96GM5 515 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 KCTD10Q9H3F6 313 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 ORC6Q9Y5N6 252 aa12.74□□□□□ -0.37
CYFIP1-207ENST00000617556 ZNF263O14978 683 aa12.73□□□□□ -0.37
CYFIP1-207ENST00000617556 TMCC1O94876 653 aa12.73□□□□□ -0.37
CYFIP1-207ENST00000617556 TGM2P21980 687 aa12.73□□□□□ -0.37
CYFIP1-207ENST00000617556 DLG4P78352 724 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms