RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 WEE1P30291 646 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 NASPP49321 788 aaPredicted RBP9.17□□□□□ -0.94
GPC6-202ENST00000617456 LILRA4P59901 499 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 AMPD2Q01433 879 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 RESTQ13127 1097 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 DMC1Q14565 340 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 MCM6Q14566 821 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 ENOX2Q16206 610 aaKnown RBP9.17□□□□□ -0.94
GPC6-202ENST00000617456 ZSCAN26Q16670 478 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 RRAGBQ5VZM2 374 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 TXNDC8Q6A555 127 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 CNNM4Q6P4Q7 775 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 TTC30AQ86WT1 665 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 DEFB124Q8NES8 71 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 RIN3Q8TB24 985 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 SPATA18Q8TC71 538 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 C2orf15Q8WU43 125 aaKnown RBP9.17□□□□□ -0.94
GPC6-202ENST00000617456 ZCCHC14Q8WYQ9 949 aaKnown RBP9.17□□□□□ -0.94
GPC6-202ENST00000617456 USP13Q92995 863 aaPredicted RBP9.17□□□□□ -0.94
GPC6-202ENST00000617456 PLIN2Q99541 437 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 P2RY13Q9BPV8 354 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 SCNM1Q9BWG6 230 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 MFRPQ9BY79 579 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 TPSD1Q9BZJ3 242 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 ZCWPW1Q9H0M4 648 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 TMEM9BQ9NQ34 198 aa9.17□□□□□ -0.94
GPC6-202ENST00000617456 ABI2Q9NYB9 513 aaPredicted RBP9.17□□□□□ -0.94
GPC6-202ENST00000617456 MAGED2Q9UNF1 606 aaPredicted RBP9.17□□□□□ -0.94
GPC6-202ENST00000617456 R3HCC1Q9Y3T6 440 aaKnown RBP9.17□□□□□ -0.94
GPC6-202ENST00000617456 NUP210Q8TEM1 1887 aaPredicted RBP9.17□□□□□ -0.94
GPC6-202ENST00000617456 ASCC3Q8N3C0 2202 aaKnown RBP9.16□□□□□ -0.94
GPC6-202ENST00000617456 AKAP13Q12802 2813 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 EML5Q05BV3 1969 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 SPEGQ15772 3267 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 NPHP3-ACAD11A0A0J9YXS1 232 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 SRRM3A6NNA2 597 aaPredicted RBP9.16□□□□□ -0.94
GPC6-202ENST00000617456 SOBPA7XYQ1 873 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 PATE3B3GLJ2 98 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 PIRO00625 290 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 KHNYNO15037 678 aaKnown RBP9.16□□□□□ -0.94
GPC6-202ENST00000617456 HAPLN1P10915 354 aaPredicted RBP9.16□□□□□ -0.94
GPC6-202ENST00000617456 BCKDHBP21953 392 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 GARTP22102 1010 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 MSNP26038 577 aaKnown RBP9.16□□□□□ -0.94
GPC6-202ENST00000617456 GJA4P35212 333 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 PNPLA4P41247 253 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 DHPSP49366 369 aaPredicted RBP9.16□□□□□ -0.94
GPC6-202ENST00000617456 GPR15P49685 360 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 SEC13P55735 322 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 SNRPFP62306 86 aaKnown RBP9.16□□□□□ -0.94
GPC6-202ENST00000617456 IRX1P78414 480 aaPredicted RBP9.16□□□□□ -0.94
GPC6-202ENST00000617456 AMPD3Q01432 767 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 SYCP1Q15431 976 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 E2F4Q16254 413 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 FBXO43Q4G163 708 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 SDHAF4Q5VUM1 108 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 C9orf57Q5W0N0 161 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 ADALQ6DHV7 355 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 JADE1Q6IE81 842 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 STXBP4Q6ZWJ1 553 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 SYT13Q7L8C5 426 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 CYP2U1Q7Z449 544 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 TMEM150AQ86TG1 271 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 LRRTM3Q86VH5 581 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 METTL23Q86XA0 190 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 CPA6Q8N4T0 437 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 GOLGA6L1Q8N7Z2 621 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 TSTD1Q8NFU3 115 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 LRRC15Q8TF66 581 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 PIGKQ92643 395 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 CD101Q93033 1021 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 EXOC4Q96A65 974 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 ACDQ96AP0 544 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 DNAJC19Q96DA6 116 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 EPSTI1Q96J88 318 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 ZNF396Q96N95 335 aaPredicted RBP9.16□□□□□ -0.94
GPC6-202ENST00000617456 TNMDQ9H2S6 317 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 TMEM206Q9H813 350 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 MAGEF1Q9HAY2 307 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 TRPC7Q9HCX4 862 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 TDP1Q9NUW8 608 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 AGO2Q9UKV8 859 aaKnown RBP9.16□□□□□ -0.94
GPC6-202ENST00000617456 LHX6Q9UPM6 363 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 MTMR6Q9Y217 621 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 CLIC4Q9Y696 253 aa9.16□□□□□ -0.94
GPC6-202ENST00000617456 TMEM8BA6NDV4 472 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 CYB561D2O14569 222 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 CDX4O14627 284 aaPredicted RBP9.15□□□□□ -0.94
GPC6-202ENST00000617456 HYAL3O43820 417 aaPredicted RBP9.15□□□□□ -0.94
GPC6-202ENST00000617456 YEATS4O95619 227 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 F11P03951 625 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 NFICP08651 508 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 FAM200BP0CF97 657 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 CEACAM1P13688 526 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 CASQ1P31415 396 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 NLRP12P59046 1061 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 IRX4P78413 519 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 GRIN1Q05586 938 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 RING1Q06587 406 aa9.15□□□□□ -0.94
GPC6-202ENST00000617456 BIRC2Q13490 618 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms