RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 OTUD4Q01804 1114 aaKnown RBP16.27■□□□□ 0.2
GPN1-212ENST00000616939 GRM2Q14416 872 aa16.27■□□□□ 0.2
GPN1-212ENST00000616939 ZFYVE27Q5T4F4 411 aa16.27■□□□□ 0.2
GPN1-212ENST00000616939 TTC39BQ5VTQ0 682 aaPredicted RBP16.27■□□□□ 0.2
GPN1-212ENST00000616939 THNSL1Q8IYQ7 743 aa16.27■□□□□ 0.2
GPN1-212ENST00000616939 NME8Q8N427 588 aa16.27■□□□□ 0.2
GPN1-212ENST00000616939 ITFG2Q969R8 447 aa16.27■□□□□ 0.2
GPN1-212ENST00000616939 ELMO3Q96BJ8 720 aa16.27■□□□□ 0.2
GPN1-212ENST00000616939 TUBGCP5Q96RT8 1024 aa16.27■□□□□ 0.2
GPN1-212ENST00000616939 KLF6Q99612 283 aaPredicted RBP16.27■□□□□ 0.2
GPN1-212ENST00000616939 FAM213AQ9BRX8 229 aa16.27■□□□□ 0.2
GPN1-212ENST00000616939 FRMD8Q9BZ67 464 aaPredicted RBP16.27■□□□□ 0.2
GPN1-212ENST00000616939 ZWILCHQ9H900 591 aa16.27■□□□□ 0.2
GPN1-212ENST00000616939 GINM1Q9NU53 330 aa16.27■□□□□ 0.2
GPN1-212ENST00000616939 MAP3K20Q9NYL2 800 aaKnown RBP16.27■□□□□ 0.2
GPN1-212ENST00000616939 SIRPGQ9P1W8 387 aa16.27■□□□□ 0.2
GPN1-212ENST00000616939 IKBKGQ9Y6K9 419 aa16.27■□□□□ 0.2
GPN1-212ENST00000616939 FAM237BA0A1B0GVD1 139 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 GOLGA8SH3BPF8 625 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 H3BRJ5 948 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 GOLGA8MH3BSY2 632 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 POLRMTO00411 1230 aaKnown RBP16.26■□□□□ 0.19
GPN1-212ENST00000616939 COPEO14579 308 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 HNRNPDLO14979 420 aaKnown RBP16.26■□□□□ 0.19
GPN1-212ENST00000616939 CDH5P33151 784 aaPredicted RBP16.26■□□□□ 0.19
GPN1-212ENST00000616939 MAP3K10Q02779 954 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 GAD2Q05329 585 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 FAAP100Q0VG06 881 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 BBS9Q3SYG4 887 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 DACT2Q5SW24 774 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 ANGEL2Q5VTE6 544 aaKnown RBP16.26■□□□□ 0.19
GPN1-212ENST00000616939 WDR78Q5VTH9 848 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 TMEM270Q6UE05 265 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 ALYREFQ86V81 257 aaKnown RBP16.26■□□□□ 0.19
GPN1-212ENST00000616939 PDSS2Q86YH6 399 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 IL31RAQ8NI17 732 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 FAM81AQ8TBF8 368 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 ACTL9Q8TC94 416 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 KIFC3Q9BVG8 833 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 C12orf65Q9H3J6 166 aaKnown RBP16.26■□□□□ 0.19
GPN1-212ENST00000616939 APOBEC3GQ9HC16 384 aaKnown RBP16.26■□□□□ 0.19
GPN1-212ENST00000616939 PKD2L1Q9P0L9 805 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 ATXN10Q9UBB4 475 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 SLC7A8Q9UHI5 535 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 XPO7Q9UIA9 1087 aaKnown RBP16.26■□□□□ 0.19
GPN1-212ENST00000616939 TMCO1Q9UM00 188 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 PCDHAC2Q9Y5I4 1007 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 SMIM31A0A1B0GVY4 71 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 G3V3G9 751 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 ATP9BO43861 1147 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 CREB3O43889 395 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 ICAM1P05362 532 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 ENO1P06733 434 aaKnown RBP16.26■□□□□ 0.19
GPN1-212ENST00000616939 SERPINA6P08185 405 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 KRT7P08729 469 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 PLCB3Q01970 1234 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 OGDHQ02218 1023 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 WASHC5Q12768 1159 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 MTMR1Q13613 665 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 HSF5Q4G112 596 aaPredicted RBP16.26■□□□□ 0.19
GPN1-212ENST00000616939 LRRC23Q53EV4 343 aaPredicted RBP16.26■□□□□ 0.19
GPN1-212ENST00000616939 TEX44Q53QW1 395 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 DCAF8Q5TAQ9 597 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 MCF2L2Q86YR7 1114 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 MCPH1Q8NEM0 835 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 ACER1Q8TDN7 264 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 FAM172AQ8WUF8 416 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 RSAD2Q8WXG1 361 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 OPTNQ96CV9 577 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 MTBPQ96DY7 904 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 CGRRF1Q99675 332 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 STN1Q9H668 368 aaKnown RBP16.26■□□□□ 0.19
GPN1-212ENST00000616939 ALG13Q9NP73 1137 aaKnown RBP16.26■□□□□ 0.19
GPN1-212ENST00000616939 COL20A1Q9P218 1284 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 ARHGAP28Q9P2N2 729 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 PPARGC1AQ9UBK2 798 aaKnown RBP16.26■□□□□ 0.19
GPN1-212ENST00000616939 TEX264Q9Y6I9 313 aa16.26■□□□□ 0.19
GPN1-212ENST00000616939 PSME4Q14997 1843 aa16.25■□□□□ 0.19
GPN1-212ENST00000616939 SPDYE2BA6NHP3 402 aa16.25■□□□□ 0.19
GPN1-212ENST00000616939 E5RJQ4 531 aa16.25■□□□□ 0.19
GPN1-212ENST00000616939 F8VP50 259 aa16.25■□□□□ 0.19
GPN1-212ENST00000616939 BIRC5O15392 142 aa16.25■□□□□ 0.19
GPN1-212ENST00000616939 CCNT2O60583 730 aaKnown RBP16.25■□□□□ 0.19
GPN1-212ENST00000616939 DKC1O60832 514 aaKnown RBP eCLIP16.25■□□□□ 0.19
GPN1-212ENST00000616939 SNNO75324 88 aaPredicted RBP16.25■□□□□ 0.19
GPN1-212ENST00000616939 PIGRP01833 764 aa16.25■□□□□ 0.19
GPN1-212ENST00000616939 SPDYE6P0CI01 402 aa16.25■□□□□ 0.19
GPN1-212ENST00000616939 PYGBP11216 843 aa16.25■□□□□ 0.19
GPN1-212ENST00000616939 AOC1P19801 751 aa16.25■□□□□ 0.19
GPN1-212ENST00000616939 GDF10P55107 478 aa16.25■□□□□ 0.19
GPN1-212ENST00000616939 MRPS9P82933 396 aaKnown RBP16.25■□□□□ 0.19
GPN1-212ENST00000616939 SPDYE2Q495Y8 402 aa16.25■□□□□ 0.19
GPN1-212ENST00000616939 PABPC1LQ4VXU2 614 aaKnown RBP16.25■□□□□ 0.19
GPN1-212ENST00000616939 RASIP1Q5U651 963 aa16.25■□□□□ 0.19
GPN1-212ENST00000616939 SLC26A11Q86WA9 606 aa16.25■□□□□ 0.19
GPN1-212ENST00000616939 JADE3Q92613 823 aa16.25■□□□□ 0.19
GPN1-212ENST00000616939 E2F7Q96AV8 911 aa16.25■□□□□ 0.19
GPN1-212ENST00000616939 HAUS1Q96CS2 278 aa16.25■□□□□ 0.19
GPN1-212ENST00000616939 MCEEQ96PE7 176 aa16.25■□□□□ 0.19
GPN1-212ENST00000616939 SRPK1Q96SB4 655 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms