RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 TTI2Q6NXR4 508 aa23.55■■□□□ 1.36
CBWD3-212ENST00000616550 FOXR2Q6PJQ5 311 aa23.55■■□□□ 1.36
CBWD3-212ENST00000616550 FRMD5Q7Z6J6 570 aa23.55■■□□□ 1.36
CBWD3-212ENST00000616550 FAM35AQ86V20 835 aa23.55■■□□□ 1.36
CBWD3-212ENST00000616550 CCDC105Q8IYK2 499 aa23.55■■□□□ 1.36
CBWD3-212ENST00000616550 DTWD2Q8NBA8 298 aa23.55■■□□□ 1.36
CBWD3-212ENST00000616550 SMARCD1Q96GM5 515 aa23.55■■□□□ 1.36
CBWD3-212ENST00000616550 FAXDC2Q96IV6 333 aa23.55■■□□□ 1.36
CBWD3-212ENST00000616550 DUSP9Q99956 384 aaKnown RBP23.55■■□□□ 1.36
CBWD3-212ENST00000616550 TDP1Q9NUW8 608 aa23.55■■□□□ 1.36
CBWD3-212ENST00000616550 TRPM5Q9NZQ8 1165 aa23.55■■□□□ 1.36
CBWD3-212ENST00000616550 HMGXB4Q9UGU5 601 aa23.55■■□□□ 1.36
CBWD3-212ENST00000616550 MIA3Q5JRA6 1907 aa23.55■■□□□ 1.36
CBWD3-212ENST00000616550 ANAPC1Q9H1A4 1944 aa23.55■■□□□ 1.36
CBWD3-212ENST00000616550 TRAV19A0A0A6YYK7 116 aa23.54■■□□□ 1.36
CBWD3-212ENST00000616550 FAM170BA6NMN3 283 aa23.54■■□□□ 1.36
CBWD3-212ENST00000616550 MAN2B1O00754 1011 aa23.54■■□□□ 1.36
CBWD3-212ENST00000616550 LRRN2O75325 713 aa23.54■■□□□ 1.36
CBWD3-212ENST00000616550 CD58P19256 250 aa23.54■■□□□ 1.36
CBWD3-212ENST00000616550 PPP3CCP48454 512 aa23.54■■□□□ 1.36
CBWD3-212ENST00000616550 USP46P62068 366 aa23.54■■□□□ 1.36
CBWD3-212ENST00000616550 PLCB2Q00722 1185 aa23.54■■□□□ 1.36
CBWD3-212ENST00000616550 INCA1Q0VD86 236 aa23.54■■□□□ 1.36
CBWD3-212ENST00000616550 PAK1Q13153 545 aa23.54■■□□□ 1.36
CBWD3-212ENST00000616550 PAQR9Q6ZVX9 377 aa23.54■■□□□ 1.36
CBWD3-212ENST00000616550 NUP93Q8N1F7 819 aa23.54■■□□□ 1.36
CBWD3-212ENST00000616550 USP13Q92995 863 aaPredicted RBP23.54■■□□□ 1.36
CBWD3-212ENST00000616550 TTLL2Q9BWV7 592 aa23.54■■□□□ 1.36
CBWD3-212ENST00000616550 NT5C1AQ9BXI3 368 aa23.54■■□□□ 1.36
CBWD3-212ENST00000616550 OSBPL6Q9BZF3 934 aa23.54■■□□□ 1.36
CBWD3-212ENST00000616550 KIF9Q9HAQ2 790 aa23.54■■□□□ 1.36
CBWD3-212ENST00000616550 TMEM30AQ9NV96 361 aa23.54■■□□□ 1.36
CBWD3-212ENST00000616550 H0Y858 1186 aa23.53■■□□□ 1.36
CBWD3-212ENST00000616550 RTN3O95197 1032 aaPredicted RBP23.53■■□□□ 1.36
CBWD3-212ENST00000616550 USP17L7P0C7H9 530 aa23.53■■□□□ 1.36
CBWD3-212ENST00000616550 GLULP15104 373 aa23.53■■□□□ 1.36
CBWD3-212ENST00000616550 STX17P56962 302 aa23.53■■□□□ 1.36
CBWD3-212ENST00000616550 CBWD6Q4V339 395 aa23.53■■□□□ 1.36
CBWD3-212ENST00000616550 CBWD3Q5JTY5 395 aa23.53■■□□□ 1.36
CBWD3-212ENST00000616550 CBWD5Q5RIA9 395 aa23.53■■□□□ 1.36
CBWD3-212ENST00000616550 FUKQ8N0W3 1084 aa23.53■■□□□ 1.36
CBWD3-212ENST00000616550 SLC35C1Q96A29 364 aa23.53■■□□□ 1.36
CBWD3-212ENST00000616550 SLITRK1Q96PX8 696 aa23.53■■□□□ 1.36
CBWD3-212ENST00000616550 KCNK16Q96T55 309 aa23.53■■□□□ 1.36
CBWD3-212ENST00000616550 LTB4R2Q9NPC1 389 aa23.53■■□□□ 1.36
CBWD3-212ENST00000616550 DMAP1Q9NPF5 467 aaPredicted RBP23.53■■□□□ 1.36
CBWD3-212ENST00000616550 MTF2Q9Y483 593 aaPredicted RBP23.53■■□□□ 1.36
CBWD3-212ENST00000616550 ARNTLO00327 626 aa23.52■■□□□ 1.36
CBWD3-212ENST00000616550 NCAM2O15394 837 aa23.52■■□□□ 1.36
CBWD3-212ENST00000616550 AP1G2O75843 785 aa23.52■■□□□ 1.36
CBWD3-212ENST00000616550 CCDC130P13994 396 aa23.52■■□□□ 1.36
CBWD3-212ENST00000616550 YWHAQP27348 245 aa23.52■■□□□ 1.36
CBWD3-212ENST00000616550 PDE6CP51160 858 aa23.52■■□□□ 1.36
CBWD3-212ENST00000616550 KPNA1P52294 538 aaPredicted RBP23.52■■□□□ 1.36
CBWD3-212ENST00000616550 IFRD2Q12894 506 aaPredicted RBP23.52■■□□□ 1.36
CBWD3-212ENST00000616550 ZNF268Q14587 947 aaPredicted RBP23.52■■□□□ 1.36
CBWD3-212ENST00000616550 TTC39CQ8N584 583 aa23.52■■□□□ 1.36
CBWD3-212ENST00000616550 C12orf29Q8N999 325 aa23.52■■□□□ 1.36
CBWD3-212ENST00000616550 SLC2A14Q8TDB8 520 aa23.52■■□□□ 1.36
CBWD3-212ENST00000616550 ZFYVE19Q96K21 471 aa23.52■■□□□ 1.36
CBWD3-212ENST00000616550 CYP2S1Q96SQ9 504 aa23.52■■□□□ 1.36
CBWD3-212ENST00000616550 KRT82Q9NSB4 513 aa23.52■■□□□ 1.36
CBWD3-212ENST00000616550 FAM49BQ9NUQ9 324 aa23.52■■□□□ 1.36
CBWD3-212ENST00000616550 CCL26Q9Y258 94 aa23.52■■□□□ 1.36
CBWD3-212ENST00000616550 COQ4Q9Y3A0 265 aa23.52■■□□□ 1.36
CBWD3-212ENST00000616550 PIAS3Q9Y6X2 628 aa23.52■■□□□ 1.36
CBWD3-212ENST00000616550 COL4A3Q01955 1670 aa23.51■■□□□ 1.35
CBWD3-212ENST00000616550 C2orf78A6NCI8 922 aa23.51■■□□□ 1.35
CBWD3-212ENST00000616550 CILPO75339 1184 aa23.51■■□□□ 1.35
CBWD3-212ENST00000616550 ABL1P00519 1130 aa23.51■■□□□ 1.35
CBWD3-212ENST00000616550 CKMP06732 381 aa23.51■■□□□ 1.35
CBWD3-212ENST00000616550 PFKLP17858 780 aa23.51■■□□□ 1.35
CBWD3-212ENST00000616550 HDCP19113 662 aa23.51■■□□□ 1.35
CBWD3-212ENST00000616550 MLLT6P55198 1093 aaPredicted RBP23.51■■□□□ 1.35
CBWD3-212ENST00000616550 TAF10Q12962 218 aa23.51■■□□□ 1.35
CBWD3-212ENST00000616550 CC2D1AQ6P1N0 951 aaPredicted RBP23.51■■□□□ 1.35
CBWD3-212ENST00000616550 CLEC17AQ6ZS10 378 aa23.51■■□□□ 1.35
CBWD3-212ENST00000616550 ARL14EPQ8N8R7 260 aaPredicted RBP23.51■■□□□ 1.35
CBWD3-212ENST00000616550 ATOH1Q92858 354 aaPredicted RBP23.51■■□□□ 1.35
CBWD3-212ENST00000616550 TATDN2Q93075 761 aa23.51■■□□□ 1.35
CBWD3-212ENST00000616550 TWNKQ96RR1 684 aa23.51■■□□□ 1.35
CBWD3-212ENST00000616550 C8orf33Q9H7E9 229 aaPredicted RBP23.51■■□□□ 1.35
CBWD3-212ENST00000616550 DLGAP2Q9P1A6 1054 aa23.51■■□□□ 1.35
CBWD3-212ENST00000616550 F5P12259 2224 aa23.5■■□□□ 1.35
CBWD3-212ENST00000616550 FGFR1OPO95684 399 aaKnown RBP23.5■■□□□ 1.35
CBWD3-212ENST00000616550 GNA14O95837 355 aa23.5■■□□□ 1.35
CBWD3-212ENST00000616550 TARSP26639 723 aaKnown RBP23.5■■□□□ 1.35
CBWD3-212ENST00000616550 ADORA2BP29275 332 aa23.5■■□□□ 1.35
CBWD3-212ENST00000616550 WHAMMQ8TF30 809 aa23.5■■□□□ 1.35
CBWD3-212ENST00000616550 FAM3CQ92520 227 aa23.5■■□□□ 1.35
CBWD3-212ENST00000616550 FBXO32Q969P5 355 aa23.5■■□□□ 1.35
CBWD3-212ENST00000616550 CYFIP2Q96F07 1278 aa23.5■■□□□ 1.35
CBWD3-212ENST00000616550 MSANTD3Q96H12 275 aa23.5■■□□□ 1.35
CBWD3-212ENST00000616550 SLC22A12Q96S37 553 aa23.5■■□□□ 1.35
CBWD3-212ENST00000616550 HNRNPABQ99729 332 aaKnown RBP23.5■■□□□ 1.35
CBWD3-212ENST00000616550 GKN1Q9NS71 199 aa23.5■■□□□ 1.35
CBWD3-212ENST00000616550 COMMD8Q9NX08 183 aa23.5■■□□□ 1.35
CBWD3-212ENST00000616550 GCNT4Q9P109 453 aa23.5■■□□□ 1.35
CBWD3-212ENST00000616550 WDFY4Q6ZS81 3184 aa23.5■■□□□ 1.35
CBWD3-212ENST00000616550 ZNF840PA6NDX5 716 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms