RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 PTK2Q05397 1052 aa11.44□□□□□ -0.58
COL4A1-205ENST00000615732 RAB33AQ14088 237 aa11.44□□□□□ -0.58
COL4A1-205ENST00000615732 UBXN2BQ14CS0 331 aa11.44□□□□□ -0.58
COL4A1-205ENST00000615732 UPP1Q16831 310 aa11.44□□□□□ -0.58
COL4A1-205ENST00000615732 MTSS1LQ765P7 747 aa11.44□□□□□ -0.58
COL4A1-205ENST00000615732 ZNF571Q7Z3V5 609 aaPredicted RBP11.44□□□□□ -0.58
COL4A1-205ENST00000615732 IRF2BP2Q7Z5L9 587 aa11.44□□□□□ -0.58
COL4A1-205ENST00000615732 BRSK2Q8IWQ3 736 aa11.44□□□□□ -0.58
COL4A1-205ENST00000615732 PPM1KQ8N3J5 372 aa11.44□□□□□ -0.58
COL4A1-205ENST00000615732 LMO3Q8TAP4 145 aa11.44□□□□□ -0.58
COL4A1-205ENST00000615732 C18orf25Q96B23 403 aaPredicted RBP11.44□□□□□ -0.58
COL4A1-205ENST00000615732 ZMAT2Q96NC0 199 aaKnown RBP11.44□□□□□ -0.58
COL4A1-205ENST00000615732 DDX23Q9BUQ8 820 aaKnown RBP11.44□□□□□ -0.58
COL4A1-205ENST00000615732 CCDC94Q9BW85 323 aaPredicted RBP11.44□□□□□ -0.58
COL4A1-205ENST00000615732 SEPT11Q9NVA2 429 aaKnown RBP11.44□□□□□ -0.58
COL4A1-205ENST00000615732 RAB20Q9NX57 234 aa11.44□□□□□ -0.58
COL4A1-205ENST00000615732 DLL3Q9NYJ7 618 aa11.44□□□□□ -0.58
COL4A1-205ENST00000615732 TFR2Q9UP52 801 aa11.44□□□□□ -0.58
COL4A1-205ENST00000615732 MTF2Q9Y483 593 aaPredicted RBP11.44□□□□□ -0.58
COL4A1-205ENST00000615732 ZFP37Q9Y6Q3 630 aaPredicted RBP11.44□□□□□ -0.58
COL4A1-205ENST00000615732 GPR179Q6PRD1 2367 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 CACNA1IQ9P0X4 2223 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 KANSL1LA0AUZ9 987 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 RCCD1A6NED2 376 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 MEFVO15553 781 aaPredicted RBP11.43□□□□□ -0.58
COL4A1-205ENST00000615732 PJA2O43164 708 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 RHOP08100 348 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 PNMA6AP0CW24 399 aaPredicted RBP11.43□□□□□ -0.58
COL4A1-205ENST00000615732 GRM5P41594 1212 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 AP3M2P53677 418 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 YARSP54577 528 aaKnown RBP11.43□□□□□ -0.58
COL4A1-205ENST00000615732 MCL1Q07820 350 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 PUM1Q14671 1186 aaKnown RBP eCLIP11.43□□□□□ -0.58
COL4A1-205ENST00000615732 MLF2Q15773 248 aaPredicted RBP11.43□□□□□ -0.58
COL4A1-205ENST00000615732 SEZ6Q53EL9 994 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 LMBRD2Q68DH5 695 aaPredicted RBP11.43□□□□□ -0.58
COL4A1-205ENST00000615732 POTEHQ6S545 545 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 ANKS3Q6ZW76 656 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 SV2AQ7L0J3 742 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 ENOSF1Q7L5Y1 443 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 TRIM58Q8NG06 486 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 TAS1R2Q8TE23 839 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 FAM212AQ96EL1 285 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 MCRS1Q96EZ8 462 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 UROC1Q96N76 676 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 NOX5Q96PH1 765 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 LACRTQ9GZZ8 138 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 PDE11AQ9HCR9 933 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.43□□□□□ -0.58
COL4A1-205ENST00000615732 ADAMTS1Q9UHI8 967 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 TNFSF13BQ9Y275 285 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 COQ4Q9Y3A0 265 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 MRPS23Q9Y3D9 190 aaKnown RBP11.43□□□□□ -0.58
COL4A1-205ENST00000615732 MRFAP1Q9Y605 127 aa11.43□□□□□ -0.58
COL4A1-205ENST00000615732 ATP8B3O60423 1300 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 NOTCH4Q99466 2003 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 A0A087X0T9 212 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 WDR27A2RRH5 827 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 NRG2O14511 850 aaPredicted RBP11.42□□□□□ -0.58
COL4A1-205ENST00000615732 ABLIM1O14639 778 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 PRRG1O14668 218 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 MOCS3O95396 460 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 ABL1P00519 1130 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 HLA-DRAP01903 254 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 FAM228BP0C875 321 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 PRKCQQ04759 706 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 IFI16Q16666 785 aaKnown RBP11.42□□□□□ -0.58
COL4A1-205ENST00000615732 ZNF528Q3MIS6 628 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 ZACNQ401N2 412 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 VARS2Q5ST30 1063 aaKnown RBP11.42□□□□□ -0.58
COL4A1-205ENST00000615732 ZBTB41Q5SVQ8 909 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 CRELD2Q6UXH1 353 aaPredicted RBP11.42□□□□□ -0.58
COL4A1-205ENST00000615732 TPRG1Q6ZUI0 275 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 APBB1IPQ7Z5R6 666 aaPredicted RBP11.42□□□□□ -0.58
COL4A1-205ENST00000615732 WDR49Q8IV35 697 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 SEMA4DQ92854 862 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 TCEAL4Q96EI5 215 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 SHDQ96IW2 340 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 BCO2Q9BYV7 579 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 PLA2G2FQ9BZM2 168 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 IMPG2Q9BZV3 1241 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 GPR88Q9GZN0 384 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 HAPLN2Q9GZV7 340 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 PTPRHQ9HD43 1115 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 SPATA6Q9NWH7 488 aaPredicted RBP11.42□□□□□ -0.58
COL4A1-205ENST00000615732 TUBGCP4Q9UGJ1 667 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 BACE2Q9Y5Z0 518 aa11.42□□□□□ -0.58
COL4A1-205ENST00000615732 ANO9A1A5B4 782 aa11.41□□□□□ -0.58
COL4A1-205ENST00000615732 FOXN3O00409 490 aaPredicted RBP11.41□□□□□ -0.58
COL4A1-205ENST00000615732 SPTLC1O15269 473 aa11.41□□□□□ -0.58
COL4A1-205ENST00000615732 FANCGO15287 622 aa11.41□□□□□ -0.58
COL4A1-205ENST00000615732 CTIFO43310 598 aaKnown RBP11.41□□□□□ -0.58
COL4A1-205ENST00000615732 LAMTOR5O43504 91 aa11.41□□□□□ -0.58
COL4A1-205ENST00000615732 TRAPPC3O43617 180 aa11.41□□□□□ -0.58
COL4A1-205ENST00000615732 IL18RAPO95256 599 aa11.41□□□□□ -0.58
COL4A1-205ENST00000615732 SEC24AO95486 1093 aa11.41□□□□□ -0.58
COL4A1-205ENST00000615732 TNNC2P02585 160 aa11.41□□□□□ -0.58
COL4A1-205ENST00000615732 LRG1P02750 347 aa11.41□□□□□ -0.58
COL4A1-205ENST00000615732 POU2F2P09086 479 aa11.41□□□□□ -0.58
COL4A1-205ENST00000615732 H2AFZP0C0S5 128 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms