RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 CNGA2Q16280 664 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 ANKRD54Q6NXT1 300 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 LCLAT1Q6UWP7 414 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.11□□□□□ -0.47
SLIRP-212ENST00000613856 KIAA1328Q86T90 577 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 C17orf53Q8N3J3 647 aaPredicted RBP12.11□□□□□ -0.47
SLIRP-212ENST00000613856 B3GALNT2Q8NCR0 500 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 HEXIM2Q96MH2 286 aaKnown RBP12.11□□□□□ -0.47
SLIRP-212ENST00000613856 ZNF518BQ9C0D4 1074 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 LHX5Q9H2C1 402 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 POMKQ9H5K3 350 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 DDX43Q9NXZ2 648 aaKnown RBP12.11□□□□□ -0.47
SLIRP-212ENST00000613856 PUF60Q9UHX1 559 aaKnown RBP12.11□□□□□ -0.47
SLIRP-212ENST00000613856 CDH9Q9ULB4 789 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 CEP83Q9Y592 693 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 NCANO14594 1321 aa12.11□□□□□ -0.47
SLIRP-212ENST00000613856 DENND4AQ7Z401 1863 aa12.1□□□□□ -0.47
SLIRP-212ENST00000613856 I3L4J1 428 aa12.1□□□□□ -0.47
SLIRP-212ENST00000613856 KRT86O43790 486 aa12.1□□□□□ -0.47
SLIRP-212ENST00000613856 TADA2AO75478 443 aa12.1□□□□□ -0.47
SLIRP-212ENST00000613856 OAZ2O95190 189 aa12.1□□□□□ -0.47
SLIRP-212ENST00000613856 H2AFZP0C0S5 128 aa12.1□□□□□ -0.47
SLIRP-212ENST00000613856 TMEM253P0C7T8 217 aa12.1□□□□□ -0.47
SLIRP-212ENST00000613856 FGFR3P22607 806 aa12.1□□□□□ -0.47
SLIRP-212ENST00000613856 LMO2P25791 158 aa12.1□□□□□ -0.47
SLIRP-212ENST00000613856 ID4P47928 161 aa12.1□□□□□ -0.47
SLIRP-212ENST00000613856 KIF5AQ12840 1032 aa12.1□□□□□ -0.47
SLIRP-212ENST00000613856 ORC1Q13415 861 aa12.1□□□□□ -0.47
SLIRP-212ENST00000613856 OVOS1Q6IE37 1185 aa12.1□□□□□ -0.47
SLIRP-212ENST00000613856 ACAD10Q6JQN1 1059 aa12.1□□□□□ -0.47
SLIRP-212ENST00000613856 FUT10Q6P4F1 479 aa12.1□□□□□ -0.47
SLIRP-212ENST00000613856 H2AFVQ71UI9 128 aa12.1□□□□□ -0.47
SLIRP-212ENST00000613856 ACOT1Q86TX2 421 aa12.1□□□□□ -0.47
SLIRP-212ENST00000613856 PHF13Q86YI8 300 aaPredicted RBP12.1□□□□□ -0.47
SLIRP-212ENST00000613856 RNF168Q8IYW5 571 aaPredicted RBP12.1□□□□□ -0.47
SLIRP-212ENST00000613856 TMEM35BQ8NCS4 154 aa12.1□□□□□ -0.47
SLIRP-212ENST00000613856 ZNF558Q96NG5 402 aa12.1□□□□□ -0.47
SLIRP-212ENST00000613856 RTP3Q9BQQ7 232 aa12.1□□□□□ -0.47
SLIRP-212ENST00000613856 SYT15Q9BQS2 421 aa12.1□□□□□ -0.47
SLIRP-212ENST00000613856 ACBD6Q9BR61 282 aa12.1□□□□□ -0.47
SLIRP-212ENST00000613856 PDCL3Q9H2J4 239 aa12.1□□□□□ -0.47
SLIRP-212ENST00000613856 DPEP3Q9H4B8 488 aa12.1□□□□□ -0.47
SLIRP-212ENST00000613856 TRMT1Q9NXH9 659 aaKnown RBP12.1□□□□□ -0.47
SLIRP-212ENST00000613856 TAS2R14Q9NYV8 317 aa12.1□□□□□ -0.47
SLIRP-212ENST00000613856 C2orf16Q68DN1 1984 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 A0A0A6YYK5 440 aaPredicted RBP12.09□□□□□ -0.47
SLIRP-212ENST00000613856 ANKRD62A6NC57 917 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 RCCD1A6NED2 376 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 HCRTO43612 131 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 PI15O43692 258 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 MICAL2O94851 1124 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 CFHP08603 1231 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 SETSIPP0DME0 302 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 PTPN1P18031 435 aaKnown RBP12.09□□□□□ -0.47
SLIRP-212ENST00000613856 TKTP29401 623 aaKnown RBP12.09□□□□□ -0.47
SLIRP-212ENST00000613856 PPM1AP35813 382 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 NSFP46459 744 aaKnown RBP12.09□□□□□ -0.47
SLIRP-212ENST00000613856 ALDH7A1P49419 539 aaKnown RBP12.09□□□□□ -0.47
SLIRP-212ENST00000613856 GALCP54803 685 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 YWHAHQ04917 246 aaPredicted RBP12.09□□□□□ -0.47
SLIRP-212ENST00000613856 GOLGA7BQ2TAP0 167 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 PKDCCQ504Y2 493 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 ARHGAP29Q52LW3 1261 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 INTS6LQ5JSJ4 861 aaKnown RBP12.09□□□□□ -0.47
SLIRP-212ENST00000613856 SPOUT1Q5T280 376 aaKnown RBP12.09□□□□□ -0.47
SLIRP-212ENST00000613856 PPP1R26Q5T8A7 1209 aaPredicted RBP12.09□□□□□ -0.47
SLIRP-212ENST00000613856 CWF19L1Q69YN2 538 aaKnown RBP12.09□□□□□ -0.47
SLIRP-212ENST00000613856 DENND1BQ6P3S1 775 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 KCNT2Q6UVM3 1135 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 TMEM173Q86WV6 379 aaPredicted RBP12.09□□□□□ -0.47
SLIRP-212ENST00000613856 THEM5Q8N1Q8 247 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 SLC39A11Q8N1S5 342 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 COLGALT1Q8NBJ5 622 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 BCL7CQ8WUZ0 217 aaPredicted RBP12.09□□□□□ -0.47
SLIRP-212ENST00000613856 CYFIP2Q96F07 1278 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 TRIM11Q96F44 468 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 IGSF21Q96ID5 467 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 VCPIP1Q96JH7 1222 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 PKMYT1Q99640 499 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 PACSIN1Q9BY11 444 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 OXCT2Q9BYC2 517 aaPredicted RBP12.09□□□□□ -0.47
SLIRP-212ENST00000613856 LACRTQ9GZZ8 138 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 TSPAN16Q9UKR8 245 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 TIMM13Q9Y5L4 95 aaPredicted RBP12.09□□□□□ -0.47
SLIRP-212ENST00000613856 WDR87Q6ZQQ6 2873 aa12.09□□□□□ -0.47
SLIRP-212ENST00000613856 FRYLO94915 3013 aa12.08□□□□□ -0.47
SLIRP-212ENST00000613856 A0A0U1RQJ8 604 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 M0QYV0 167 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 FTLP02792 175 aaPredicted RBP12.08□□□□□ -0.48
SLIRP-212ENST00000613856 PDGFRBP09619 1106 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 MYBL1P10243 752 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 BCAT1P54687 386 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 PSMC1P62191 440 aaKnown RBP12.08□□□□□ -0.48
SLIRP-212ENST00000613856 TSPY1Q01534 308 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 PLCB3Q01970 1234 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 MRPL58Q14197 206 aaKnown RBP12.08□□□□□ -0.48
SLIRP-212ENST00000613856 TCEAL1Q15170 157 aa12.08□□□□□ -0.48
SLIRP-212ENST00000613856 MAPRE1Q15691 268 aaKnown RBP12.08□□□□□ -0.48
SLIRP-212ENST00000613856 VARS2Q5ST30 1063 aaKnown RBP12.08□□□□□ -0.48
SLIRP-212ENST00000613856 KIAA0319Q5VV43 1072 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms