RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 NSL1Q96IY1 281 aa22.99■■□□□ 1.27
POLR2J3-220ENST00000613744 POP1Q99575 1024 aaKnown RBP22.99■■□□□ 1.27
POLR2J3-220ENST00000613744 SLCO1B3Q9NPD5 702 aa22.99■■□□□ 1.27
POLR2J3-220ENST00000613744 IGKV6D-21A0A0A0MT36 114 aa22.99■■□□□ 1.27
POLR2J3-220ENST00000613744 TBX10O75333 385 aa22.99■■□□□ 1.27
POLR2J3-220ENST00000613744 KRT36O76013 467 aa22.99■■□□□ 1.27
POLR2J3-220ENST00000613744 HAUS5O94927 633 aa22.99■■□□□ 1.27
POLR2J3-220ENST00000613744 LYNP07948 512 aa22.99■■□□□ 1.27
POLR2J3-220ENST00000613744 MAGEA8P43361 318 aa22.99■■□□□ 1.27
POLR2J3-220ENST00000613744 FAM91A1Q658Y4 838 aa22.99■■□□□ 1.27
POLR2J3-220ENST00000613744 OTOAQ7RTW8 1153 aa22.99■■□□□ 1.27
POLR2J3-220ENST00000613744 UBE2OQ9C0C9 1292 aaKnown RBP22.99■■□□□ 1.27
POLR2J3-220ENST00000613744 ANKFY1Q9P2R3 1169 aa22.99■■□□□ 1.27
POLR2J3-220ENST00000613744 TBC1D30Q9Y2I9 924 aa22.99■■□□□ 1.27
POLR2J3-220ENST00000613744 WDR81Q562E7 1941 aa22.99■■□□□ 1.27
POLR2J3-220ENST00000613744 FOXN3O00409 490 aaPredicted RBP22.98■■□□□ 1.27
POLR2J3-220ENST00000613744 DLATP10515 647 aaKnown RBP22.98■■□□□ 1.27
POLR2J3-220ENST00000613744 LSAMPQ13449 338 aa22.98■■□□□ 1.27
POLR2J3-220ENST00000613744 RASIP1Q5U651 963 aa22.98■■□□□ 1.27
POLR2J3-220ENST00000613744 HS2ST1Q7LGA3 356 aa22.98■■□□□ 1.27
POLR2J3-220ENST00000613744 TRIM74Q86UV6 250 aa22.98■■□□□ 1.27
POLR2J3-220ENST00000613744 TRIM73Q86UV7 250 aa22.98■■□□□ 1.27
POLR2J3-220ENST00000613744 CCDC89Q8N998 374 aa22.98■■□□□ 1.27
POLR2J3-220ENST00000613744 ZNF564Q8TBZ8 553 aaPredicted RBP22.98■■□□□ 1.27
POLR2J3-220ENST00000613744 C16orf70Q9BSU1 422 aa22.98■■□□□ 1.27
POLR2J3-220ENST00000613744 PAK6Q9NQU5 681 aaPredicted RBP22.98■■□□□ 1.27
POLR2J3-220ENST00000613744 GTF3C4Q9UKN8 822 aa22.98■■□□□ 1.27
POLR2J3-220ENST00000613744 GMEB1Q9Y692 573 aa22.98■■□□□ 1.27
POLR2J3-220ENST00000613744 GYG2O15488 501 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 YWHABP31946 246 aaKnown RBP22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 ADCY8P40145 1251 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 PRKCEQ02156 737 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 KCNA10Q16322 511 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 HHATQ5VTY9 493 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 PLA2G4FQ68DD2 849 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 ANKS1BQ7Z6G8 1248 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 ATP6V0A1Q93050 837 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 MCUR1Q96AQ8 359 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 DCLK3Q9C098 648 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 UPF3AQ9H1J1 476 aaKnown RBP22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 DMAC2Q9NW81 257 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 FRMD4BQ9Y2L6 1034 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 NEU2Q9Y3R4 380 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 MAFBQ9Y5Q3 323 aaPredicted RBP22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 P4HA2O15460 535 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 MSCO60682 206 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 COQ9O75208 318 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 PYGBP11216 843 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 ARHGAP44Q17R89 818 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 CBWD6Q4V339 395 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 BRDTQ58F21 947 aaPredicted RBP22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 CBWD3Q5JTY5 395 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 CBWD5Q5RIA9 395 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 FAM160B1Q5W0V3 765 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 CXCL17Q6UXB2 119 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 MTDHQ86UE4 582 aaKnown RBP22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 CCNJLQ8IV13 435 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 SLC20A1Q8WUM9 679 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 C1orf54Q8WWF1 131 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 ZNF75CPQ92670 426 aaPredicted RBP22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 RUSC1Q9BVN2 902 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 RNPEPQ9H4A4 650 aa22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 MYH9P35579 1960 aaKnown RBP22.97■■□□□ 1.27
POLR2J3-220ENST00000613744 EXOC1LA0A1B0GW35 172 aa22.96■■□□□ 1.27
POLR2J3-220ENST00000613744 CLDN3O15551 220 aa22.96■■□□□ 1.27
POLR2J3-220ENST00000613744 LGR5O75473 907 aa22.96■■□□□ 1.27
POLR2J3-220ENST00000613744 CDK7P50613 346 aa22.96■■□□□ 1.27
POLR2J3-220ENST00000613744 RAP1GDS1P52306 607 aa22.96■■□□□ 1.27
POLR2J3-220ENST00000613744 MYBPC2Q14324 1141 aa22.96■■□□□ 1.27
POLR2J3-220ENST00000613744 LIN52Q52LA3 116 aa22.96■■□□□ 1.27
POLR2J3-220ENST00000613744 ZCCHC9Q8N567 271 aaKnown RBP22.96■■□□□ 1.27
POLR2J3-220ENST00000613744 SPOCK2Q92563 424 aa22.96■■□□□ 1.27
POLR2J3-220ENST00000613744 SMARCAD1Q9H4L7 1026 aa22.96■■□□□ 1.27
POLR2J3-220ENST00000613744 KRT82Q9NSB4 513 aa22.96■■□□□ 1.27
POLR2J3-220ENST00000613744 ARHGEF35A5YM69 484 aa22.96■■□□□ 1.27
POLR2J3-220ENST00000613744 H3BRB1 525 aa22.96■■□□□ 1.27
POLR2J3-220ENST00000613744 MAGEA4P43358 317 aa22.96■■□□□ 1.27
POLR2J3-220ENST00000613744 MCL1Q07820 350 aa22.96■■□□□ 1.27
POLR2J3-220ENST00000613744 WDR72Q3MJ13 1102 aa22.96■■□□□ 1.27
POLR2J3-220ENST00000613744 SH2D4BQ5SQS7 431 aa22.96■■□□□ 1.27
POLR2J3-220ENST00000613744 STXBP4Q6ZWJ1 553 aa22.96■■□□□ 1.27
POLR2J3-220ENST00000613744 C4orf19Q8IY42 314 aa22.96■■□□□ 1.27
POLR2J3-220ENST00000613744 VPS52Q8N1B4 723 aa22.96■■□□□ 1.27
POLR2J3-220ENST00000613744 LMO3Q8TAP4 145 aa22.96■■□□□ 1.27
POLR2J3-220ENST00000613744 ARMC5Q96C12 935 aa22.96■■□□□ 1.27
POLR2J3-220ENST00000613744 TUT1Q9H6E5 874 aaKnown RBP22.96■■□□□ 1.27
POLR2J3-220ENST00000613744 KIAA1586Q9HCI6 787 aa22.96■■□□□ 1.27
POLR2J3-220ENST00000613744 TYROBPO43914 113 aa22.95■■□□□ 1.26
POLR2J3-220ENST00000613744 SPAG7O75391 227 aa22.95■■□□□ 1.26
POLR2J3-220ENST00000613744 ASGR1P07306 291 aa22.95■■□□□ 1.26
POLR2J3-220ENST00000613744 ANO5Q75V66 913 aa22.95■■□□□ 1.26
POLR2J3-220ENST00000613744 KLHDC9Q8NEP7 349 aa22.95■■□□□ 1.26
POLR2J3-220ENST00000613744 NUP85Q9BW27 656 aa22.95■■□□□ 1.26
POLR2J3-220ENST00000613744 CIDEBQ9UHD4 219 aa22.95■■□□□ 1.26
POLR2J3-220ENST00000613744 SEPT9Q9UHD8 586 aaPredicted RBP22.95■■□□□ 1.26
POLR2J3-220ENST00000613744 SLC24A2Q9UI40 661 aa22.95■■□□□ 1.26
POLR2J3-220ENST00000613744 EMSYQ7Z589 1322 aa22.95■■□□□ 1.26
POLR2J3-220ENST00000613744 MAGEC1O60732 1142 aa22.94■■□□□ 1.26
POLR2J3-220ENST00000613744 HOXD8P13378 290 aaPredicted RBP22.94■■□□□ 1.26
POLR2J3-220ENST00000613744 GCAP28676 217 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms