RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 SLC38A8A6NNN8 435 aa12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 TNFRSF10AO00220 468 aa12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 TRIM66O15016 1216 aa12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 BEST1O76090 585 aa12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 NOL4O94818 638 aa12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 CSH1P0DML2 217 aa12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 CSH2P0DML3 217 aa12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 GABRR2P28476 465 aa12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 ZNF165P49910 485 aa12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 YWHAEP62258 255 aaKnown RBP12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 KCNMA1Q12791 1236 aa12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 TEAD2Q15562 447 aa12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 PPP1R26Q5T8A7 1209 aaPredicted RBP12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 GJB7Q6PEY0 223 aa12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 TMEM150AQ86TG1 271 aa12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 MCRS1Q96EZ8 462 aa12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 TRMT2BQ96GJ1 504 aaKnown RBP12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 SMARCD1Q96GM5 515 aa12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 C8orf48Q96LL4 319 aa12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 MYRFLQ96LU7 910 aa12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 CEP295NLQ96MC4 621 aa12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 HNRNPABQ99729 332 aaKnown RBP12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 MED10Q9BTT4 135 aa12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 CSNK1G1Q9HCP0 422 aa12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 KRT82Q9NSB4 513 aa12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 APEX2Q9UBZ4 518 aa12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 MAGED2Q9UNF1 606 aaPredicted RBP12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 ZFP37Q9Y6Q3 630 aaPredicted RBP12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 RNF225M0QZC1 329 aaPredicted RBP12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 DLL1O00548 723 aa12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 ASGR2P07307 311 aa12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 ATP1A3P13637 1013 aa12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 TRIM21P19474 475 aaKnown RBP12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 ANXA13P27216 316 aa12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 ADORA2BP29275 332 aa12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 USP46P62068 366 aa12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 TAF12Q16514 161 aa12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 STXBP5Q5T5C0 1151 aa12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 DPY19L2P1Q6NXN4 242 aa12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 TMEM270Q6UE05 265 aa12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 DENND5BQ6ZUT9 1274 aa12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 APTXQ7Z2E3 356 aaKnown RBP12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 ZMIZ2Q8NF64 920 aa12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 ST13P5Q8NFI4 369 aaPredicted RBP12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 HEXIM2Q96MH2 286 aaKnown RBP12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 ZSWIM3Q96MP5 696 aa12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 SMOQ99835 787 aa12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 VPS16Q9H269 839 aa12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 KCNK12Q9HB15 430 aa12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 SIX2Q9NPC8 291 aa12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 UBE2TQ9NPD8 197 aaPredicted RBP12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 DMAP1Q9NPF5 467 aaPredicted RBP12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 GDE1Q9NZC3 331 aa12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 LIMA1Q9UHB6 759 aaKnown RBP12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 MUTYHQ9UIF7 546 aa12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 ANAPC1Q9H1A4 1944 aa12.01□□□□□ -0.49
CCL3L3-201ENST00000612839 ATP8B3O60423 1300 aa12□□□□□ -0.49
CCL3L3-201ENST00000612839 LRRC10BA6NIK2 292 aa12□□□□□ -0.49
CCL3L3-201ENST00000612839 ANHXE9PGG2 379 aa12□□□□□ -0.49
CCL3L3-201ENST00000612839 PES1O00541 588 aaKnown RBP12□□□□□ -0.49
CCL3L3-201ENST00000612839 TNFRSF10BO14763 440 aa12□□□□□ -0.49
CCL3L3-201ENST00000612839 TADA3O75528 432 aa12□□□□□ -0.49
CCL3L3-201ENST00000612839 AP1G2O75843 785 aa12□□□□□ -0.49
CCL3L3-201ENST00000612839 FGF19O95750 216 aa12□□□□□ -0.49
CCL3L3-201ENST00000612839 F11P03951 625 aa12□□□□□ -0.49
CCL3L3-201ENST00000612839 CYP4F8P98187 520 aa12□□□□□ -0.49
CCL3L3-201ENST00000612839 HTR4Q13639 388 aa12□□□□□ -0.49
CCL3L3-201ENST00000612839 IQCB1Q15051 598 aa12□□□□□ -0.49
CCL3L3-201ENST00000612839 ARHGAP17Q68EM7 881 aa12□□□□□ -0.49
CCL3L3-201ENST00000612839 PARM1Q6UWI2 310 aa12□□□□□ -0.49
CCL3L3-201ENST00000612839 CLEC20AQ6ZU45 233 aa12□□□□□ -0.49
CCL3L3-201ENST00000612839 RSAD2Q8WXG1 361 aa12□□□□□ -0.49
CCL3L3-201ENST00000612839 FGF14Q92915 247 aa12□□□□□ -0.49
CCL3L3-201ENST00000612839 JAKMIP2Q96AA8 810 aa12□□□□□ -0.49
CCL3L3-201ENST00000612839 DNAI2Q9GZS0 605 aa12□□□□□ -0.49
CCL3L3-201ENST00000612839 ATXN3LQ9H3M9 355 aa12□□□□□ -0.49
CCL3L3-201ENST00000612839 AJAP1Q9UKB5 411 aaPredicted RBP12□□□□□ -0.49
CCL3L3-201ENST00000612839 CNTN6Q9UQ52 1028 aa12□□□□□ -0.49
CCL3L3-201ENST00000612839 PCDHB4Q9Y5E5 795 aa12□□□□□ -0.49
CCL3L3-201ENST00000612839 NUP210Q8TEM1 1887 aaPredicted RBP12□□□□□ -0.49
CCL3L3-201ENST00000612839 SMTNL1A8MU46 457 aa11.99□□□□□ -0.49
CCL3L3-201ENST00000612839 ARHGAP33O14559 1287 aa11.99□□□□□ -0.49
CCL3L3-201ENST00000612839 PAEPP09466 180 aa11.99□□□□□ -0.49
CCL3L3-201ENST00000612839 FAM200BP0CF97 657 aa11.99□□□□□ -0.49
CCL3L3-201ENST00000612839 CDC25CP30307 473 aa11.99□□□□□ -0.49
CCL3L3-201ENST00000612839 ZNF132P52740 706 aa11.99□□□□□ -0.49
CCL3L3-201ENST00000612839 COPB1P53618 953 aaKnown RBP11.99□□□□□ -0.49
CCL3L3-201ENST00000612839 MAP3K7CLP57077 242 aa11.99□□□□□ -0.49
CCL3L3-201ENST00000612839 PTPN21Q16825 1174 aa11.99□□□□□ -0.49
CCL3L3-201ENST00000612839 FAM78AQ5JUQ0 283 aa11.99□□□□□ -0.49
CCL3L3-201ENST00000612839 ENOSF1Q7L5Y1 443 aa11.99□□□□□ -0.49
CCL3L3-201ENST00000612839 NUP93Q8N1F7 819 aa11.99□□□□□ -0.49
CCL3L3-201ENST00000612839 RBBP8NLQ8NC74 664 aaPredicted RBP11.99□□□□□ -0.49
CCL3L3-201ENST00000612839 RPP25Q9BUL9 199 aaKnown RBP11.99□□□□□ -0.49
CCL3L3-201ENST00000612839 TTLL2Q9BWV7 592 aa11.99□□□□□ -0.49
CCL3L3-201ENST00000612839 SMOC2Q9H3U7 446 aa11.99□□□□□ -0.49
CCL3L3-201ENST00000612839 IGSF9Q9P2J2 1179 aa11.99□□□□□ -0.49
CCL3L3-201ENST00000612839 UXTQ9UBK9 157 aaPredicted RBP11.99□□□□□ -0.49
CCL3L3-201ENST00000612839 NUMBLQ9Y6R0 609 aa11.99□□□□□ -0.49
CCL3L3-201ENST00000612839 BDP1A6H8Y1 2624 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms