RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 TBXAS1P24557 533 aaPredicted RBP19.17■□□□□ 0.66
SEMA3B-211ENST00000612509 YWHAEP62258 255 aaKnown RBP19.17■□□□□ 0.66
SEMA3B-211ENST00000612509 PFKPQ01813 784 aa19.17■□□□□ 0.66
SEMA3B-211ENST00000612509 CWF19L1Q69YN2 538 aaKnown RBP19.17■□□□□ 0.66
SEMA3B-211ENST00000612509 TXNDC8Q6A555 127 aa19.17■□□□□ 0.66
SEMA3B-211ENST00000612509 IRF2BP1Q8IU81 584 aa19.17■□□□□ 0.66
SEMA3B-211ENST00000612509 CMTM8Q8IZV2 173 aa19.17■□□□□ 0.66
SEMA3B-211ENST00000612509 UBR7Q8N806 425 aa19.17■□□□□ 0.66
SEMA3B-211ENST00000612509 MAB21L3Q8N8X9 362 aa19.17■□□□□ 0.66
SEMA3B-211ENST00000612509 ZMIZ2Q8NF64 920 aa19.17■□□□□ 0.66
SEMA3B-211ENST00000612509 LMO3Q8TAP4 145 aa19.17■□□□□ 0.66
SEMA3B-211ENST00000612509 KCNK16Q96T55 309 aa19.17■□□□□ 0.66
SEMA3B-211ENST00000612509 HNRNPABQ99729 332 aaKnown RBP19.17■□□□□ 0.66
SEMA3B-211ENST00000612509 SMOQ99835 787 aa19.17■□□□□ 0.66
SEMA3B-211ENST00000612509 THAP9Q9H5L6 903 aa19.17■□□□□ 0.66
SEMA3B-211ENST00000612509 OBP2AQ9NY56 170 aa19.17■□□□□ 0.66
SEMA3B-211ENST00000612509 HELZP42694 1942 aaKnown RBP19.17■□□□□ 0.66
SEMA3B-211ENST00000612509 TICRRQ7Z2Z1 1910 aa19.17■□□□□ 0.66
SEMA3B-211ENST00000612509 COL4A3Q01955 1670 aa19.17■□□□□ 0.66
SEMA3B-211ENST00000612509 SOBPA7XYQ1 873 aa19.16■□□□□ 0.66
SEMA3B-211ENST00000612509 FAM200BP0CF97 657 aa19.16■□□□□ 0.66
SEMA3B-211ENST00000612509 AVPR1AP37288 418 aa19.16■□□□□ 0.66
SEMA3B-211ENST00000612509 SLC5A3P53794 718 aa19.16■□□□□ 0.66
SEMA3B-211ENST00000612509 RAD23BP54727 409 aa19.16■□□□□ 0.66
SEMA3B-211ENST00000612509 IFRD2Q12894 506 aaPredicted RBP19.16■□□□□ 0.66
SEMA3B-211ENST00000612509 CCDC183Q5T5S1 534 aa19.16■□□□□ 0.66
SEMA3B-211ENST00000612509 MON1AQ86VX9 555 aa19.16■□□□□ 0.66
SEMA3B-211ENST00000612509 GPIHBP1Q8IV16 184 aa19.16■□□□□ 0.66
SEMA3B-211ENST00000612509 MFSD6LQ8IWD5 586 aa19.16■□□□□ 0.66
SEMA3B-211ENST00000612509 NUP93Q8N1F7 819 aa19.16■□□□□ 0.66
SEMA3B-211ENST00000612509 SLC4A11Q8NBS3 891 aa19.16■□□□□ 0.66
SEMA3B-211ENST00000612509 CYFIP2Q96F07 1278 aa19.16■□□□□ 0.66
SEMA3B-211ENST00000612509 TRMT61BQ9BVS5 477 aaKnown RBP19.16■□□□□ 0.66
SEMA3B-211ENST00000612509 SMG9Q9H0W8 520 aaKnown RBP19.16■□□□□ 0.66
SEMA3B-211ENST00000612509 BRD9Q9H8M2 597 aa19.16■□□□□ 0.66
SEMA3B-211ENST00000612509 CSNK1G1Q9HCP0 422 aa19.16■□□□□ 0.66
SEMA3B-211ENST00000612509 TRPC7Q9HCX4 862 aa19.16■□□□□ 0.66
SEMA3B-211ENST00000612509 ZDBF2Q9HCK1 2354 aa19.16■□□□□ 0.66
SEMA3B-211ENST00000612509 DPYSL4O14531 572 aa19.15■□□□□ 0.66
SEMA3B-211ENST00000612509 BEST1O76090 585 aa19.15■□□□□ 0.66
SEMA3B-211ENST00000612509 RTN3O95197 1032 aaPredicted RBP19.15■□□□□ 0.66
SEMA3B-211ENST00000612509 COL9A1P20849 921 aa19.15■□□□□ 0.66
SEMA3B-211ENST00000612509 GDI1P31150 447 aa19.15■□□□□ 0.66
SEMA3B-211ENST00000612509 VCPP55072 806 aaKnown RBP19.15■□□□□ 0.66
SEMA3B-211ENST00000612509 FCHO2Q0JRZ9 810 aa19.15■□□□□ 0.66
SEMA3B-211ENST00000612509 CT47A1Q5JQC4 288 aaPredicted RBP19.15■□□□□ 0.66
SEMA3B-211ENST00000612509 IER5LQ5T953 404 aa19.15■□□□□ 0.66
SEMA3B-211ENST00000612509 CLEC20AQ6ZU45 233 aa19.15■□□□□ 0.66
SEMA3B-211ENST00000612509 CREBRFQ8IUR6 639 aa19.15■□□□□ 0.66
SEMA3B-211ENST00000612509 FAM114A1Q8IWE2 563 aa19.15■□□□□ 0.66
SEMA3B-211ENST00000612509 PPM1KQ8N3J5 372 aa19.15■□□□□ 0.66
SEMA3B-211ENST00000612509 DNASE1L2Q92874 299 aa19.15■□□□□ 0.66
SEMA3B-211ENST00000612509 TMEM176AQ96HP8 235 aa19.15■□□□□ 0.66
SEMA3B-211ENST00000612509 INTS2Q9H0H0 1204 aaKnown RBP19.15■□□□□ 0.66
SEMA3B-211ENST00000612509 KIF9Q9HAQ2 790 aa19.15■□□□□ 0.66
SEMA3B-211ENST00000612509 TRPM5Q9NZQ8 1165 aa19.15■□□□□ 0.66
SEMA3B-211ENST00000612509 GCNT4Q9P109 453 aa19.15■□□□□ 0.66
SEMA3B-211ENST00000612509 HCN4Q9Y3Q4 1203 aa19.15■□□□□ 0.66
SEMA3B-211ENST00000612509 TRAV19A0A0A6YYK7 116 aa19.14■□□□□ 0.65
SEMA3B-211ENST00000612509 TNFRSF10BO14763 440 aa19.14■□□□□ 0.65
SEMA3B-211ENST00000612509 NPR3P17342 541 aa19.14■□□□□ 0.65
SEMA3B-211ENST00000612509 MTIF2P46199 727 aaKnown RBP19.14■□□□□ 0.65
SEMA3B-211ENST00000612509 MAP3K7CLP57077 242 aa19.14■□□□□ 0.65
SEMA3B-211ENST00000612509 TAF10Q12962 218 aa19.14■□□□□ 0.65
SEMA3B-211ENST00000612509 MLF2Q15773 248 aaPredicted RBP19.14■□□□□ 0.65
SEMA3B-211ENST00000612509 PPP1R26Q5T8A7 1209 aaPredicted RBP19.14■□□□□ 0.65
SEMA3B-211ENST00000612509 ARHGEF19Q8IW93 802 aa19.14■□□□□ 0.65
SEMA3B-211ENST00000612509 YAF2Q8IY57 180 aa19.14■□□□□ 0.65
SEMA3B-211ENST00000612509 FLCNQ8NFG4 579 aa19.14■□□□□ 0.65
SEMA3B-211ENST00000612509 IRF7Q92985 503 aa19.14■□□□□ 0.65
SEMA3B-211ENST00000612509 USP13Q92995 863 aaPredicted RBP19.14■□□□□ 0.65
SEMA3B-211ENST00000612509 HEXIM2Q96MH2 286 aaKnown RBP19.14■□□□□ 0.65
SEMA3B-211ENST00000612509 LRRC3BQ96PB8 259 aa19.14■□□□□ 0.65
SEMA3B-211ENST00000612509 SLITRK1Q96PX8 696 aa19.14■□□□□ 0.65
SEMA3B-211ENST00000612509 TBC1D17Q9HA65 648 aa19.14■□□□□ 0.65
SEMA3B-211ENST00000612509 C2orf78A6NCI8 922 aa19.13■□□□□ 0.65
SEMA3B-211ENST00000612509 RFX1P22670 979 aa19.13■□□□□ 0.65
SEMA3B-211ENST00000612509 YWHAQP27348 245 aa19.13■□□□□ 0.65
SEMA3B-211ENST00000612509 PPP3CCP48454 512 aa19.13■□□□□ 0.65
SEMA3B-211ENST00000612509 GCNT1Q02742 428 aa19.13■□□□□ 0.65
SEMA3B-211ENST00000612509 ZNF268Q14587 947 aaPredicted RBP19.13■□□□□ 0.65
SEMA3B-211ENST00000612509 ARHGAP17Q68EM7 881 aa19.13■□□□□ 0.65
SEMA3B-211ENST00000612509 CELF5Q8N6W0 485 aaKnown RBP19.13■□□□□ 0.65
SEMA3B-211ENST00000612509 EHBP1Q8NDI1 1231 aa19.13■□□□□ 0.65
SEMA3B-211ENST00000612509 SCAMP5Q8TAC9 235 aa19.13■□□□□ 0.65
SEMA3B-211ENST00000612509 BPIFB1Q8TDL5 484 aa19.13■□□□□ 0.65
SEMA3B-211ENST00000612509 KAT5Q92993 513 aa19.13■□□□□ 0.65
SEMA3B-211ENST00000612509 FBXO32Q969P5 355 aa19.13■□□□□ 0.65
SEMA3B-211ENST00000612509 JAKMIP2Q96AA8 810 aa19.13■□□□□ 0.65
SEMA3B-211ENST00000612509 SLC22A12Q96S37 553 aa19.13■□□□□ 0.65
SEMA3B-211ENST00000612509 RAPGEFL1Q9UHV5 662 aa19.13■□□□□ 0.65
SEMA3B-211ENST00000612509 CCL26Q9Y258 94 aa19.13■□□□□ 0.65
SEMA3B-211ENST00000612509 ZNF840PA6NDX5 716 aa19.12■□□□□ 0.65
SEMA3B-211ENST00000612509 ARNTLO00327 626 aa19.12■□□□□ 0.65
SEMA3B-211ENST00000612509 ZNF263O14978 683 aa19.12■□□□□ 0.65
SEMA3B-211ENST00000612509 CHADO15335 359 aa19.12■□□□□ 0.65
SEMA3B-211ENST00000612509 CKMP06732 381 aa19.12■□□□□ 0.65
SEMA3B-211ENST00000612509 USP17L7P0C7H9 530 aa19.12■□□□□ 0.65
SEMA3B-211ENST00000612509 PFKLP17858 780 aa19.12■□□□□ 0.65
SEMA3B-211ENST00000612509 ACO1P21399 889 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms