RNA–Protein interactions for RNA: ENST00000606893.5

CDC40-207, Transcript of cell division cycle 40, humanhuman

TSL 2

Gene CDC40, Length 3,372 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-207ENST00000606893 TTLL3Q9Y4R7 772 aa7.31□□□□□ -1.24
CDC40-207ENST00000606893 MYO18AQ92614 2054 aaKnown RBP7.31□□□□□ -1.24
CDC40-207ENST00000606893 MYH11P35749 1972 aa7.31□□□□□ -1.24
CDC40-207ENST00000606893 IGKV6D-21A0A0A0MT36 114 aa7.31□□□□□ -1.24
CDC40-207ENST00000606893 DNM1LO00429 736 aa7.31□□□□□ -1.24
CDC40-207ENST00000606893 RASSF9O75901 435 aa7.31□□□□□ -1.24
CDC40-207ENST00000606893 RARAP10276 462 aa7.31□□□□□ -1.24
CDC40-207ENST00000606893 RALAP11233 206 aa7.31□□□□□ -1.24
CDC40-207ENST00000606893 SAT1P21673 171 aa7.31□□□□□ -1.24
CDC40-207ENST00000606893 GARTP22102 1010 aa7.31□□□□□ -1.24
CDC40-207ENST00000606893 SP100P23497 879 aaPredicted RBP7.31□□□□□ -1.24
CDC40-207ENST00000606893 MLH1P40692 756 aa7.31□□□□□ -1.24
CDC40-207ENST00000606893 GJA8P48165 433 aa7.31□□□□□ -1.24
CDC40-207ENST00000606893 ATXN3P54252 364 aaPredicted RBP7.31□□□□□ -1.24
CDC40-207ENST00000606893 DNAJC3Q13217 504 aa7.31□□□□□ -1.24
CDC40-207ENST00000606893 ASTE1Q2TB18 679 aaPredicted RBP7.31□□□□□ -1.24
CDC40-207ENST00000606893 FAM109BQ6ICB4 259 aaPredicted RBP7.31□□□□□ -1.24
CDC40-207ENST00000606893 RINLQ6ZS11 566 aa7.31□□□□□ -1.24
CDC40-207ENST00000606893 PARP9Q8IXQ6 854 aa7.31□□□□□ -1.24
CDC40-207ENST00000606893 ABI1Q8IZP0 508 aa7.31□□□□□ -1.24
CDC40-207ENST00000606893 HSPH1Q92598 858 aa7.31□□□□□ -1.24
CDC40-207ENST00000606893 C18orf25Q96B23 403 aaPredicted RBP7.31□□□□□ -1.24
CDC40-207ENST00000606893 LRRC45Q96CN5 670 aa7.31□□□□□ -1.24
CDC40-207ENST00000606893 IFT122Q9HBG6 1241 aa7.31□□□□□ -1.24
CDC40-207ENST00000606893 SLCO1B3Q9NPD5 702 aa7.31□□□□□ -1.24
CDC40-207ENST00000606893 PAK6Q9NQU5 681 aaPredicted RBP7.31□□□□□ -1.24
CDC40-207ENST00000606893 LRFN2Q9ULH4 789 aa7.31□□□□□ -1.24
CDC40-207ENST00000606893 CNTRLQ7Z7A1 2325 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 RBM47A0AV96 593 aaKnown RBP7.3□□□□□ -1.24
CDC40-207ENST00000606893 GMNCA6NCL1 334 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 SGK1O00141 431 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 ZSCAN9O15535 394 aaPredicted RBP7.3□□□□□ -1.24
CDC40-207ENST00000606893 MGEA5O60502 916 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 FERP16591 822 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 STX2P32856 288 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 ARL2P36404 184 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 RGS7P49802 495 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 PDE6CP51160 858 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 NCKAP1LP55160 1127 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 RPL7AP62424 266 aaKnown RBP7.3□□□□□ -1.24
CDC40-207ENST00000606893 PPP2R2AP63151 447 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 ATP11AP98196 1134 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 FAAP100Q0VG06 881 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 FASTKD3Q14CZ7 662 aaKnown RBP7.3□□□□□ -1.24
CDC40-207ENST00000606893 KRT39Q6A163 491 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 CYB5D1Q6P9G0 228 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 FOXR2Q6PJQ5 311 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 ARHGEF2Q92974 986 aaKnown RBP7.3□□□□□ -1.24
CDC40-207ENST00000606893 EMID1Q96A84 441 aaPredicted RBP7.3□□□□□ -1.24
CDC40-207ENST00000606893 RSRC1Q96IZ7 334 aaKnown RBP7.3□□□□□ -1.24
CDC40-207ENST00000606893 SEC16BQ96JE7 1060 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 RPGRIP1Q96KN7 1286 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 NT5C1BQ96P26 610 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 PLEKHG4BQ96PX9 1271 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 PAAF1Q9BRP4 392 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 UNKQ9C0B0 810 aaKnown RBP7.3□□□□□ -1.24
CDC40-207ENST00000606893 PHACTR1Q9C0D0 580 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 SAYSD1Q9NPB0 183 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 SIX2Q9NPC8 291 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 C1orf112Q9NSG2 853 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 GPATCH2LQ9NWQ4 482 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 CXXC1Q9P0U4 656 aaPredicted RBP7.3□□□□□ -1.24
CDC40-207ENST00000606893 PCDHA2Q9Y5H9 948 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 SSU72P8A0A1W2PR75 194 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 TRIM43BA6NCK2 446 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 ACKR2O00590 384 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 EXTL3O43909 919 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 GMPRP36959 345 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 IFI16Q16666 785 aaKnown RBP7.3□□□□□ -1.24
CDC40-207ENST00000606893 BBS9Q3SYG4 887 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 GKAP1Q5VSY0 366 aaPredicted RBP7.3□□□□□ -1.24
CDC40-207ENST00000606893 TXNRD3NBQ6F5E7 133 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 BZW1Q7L1Q6 419 aaKnown RBP7.3□□□□□ -1.24
CDC40-207ENST00000606893 EPM2AIP1Q7L775 607 aaPredicted RBP7.3□□□□□ -1.24
CDC40-207ENST00000606893 IQCKQ8N0W5 287 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 UBL4BQ8N7F7 174 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 STKLD1Q8NE28 680 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 HELQQ8TDG4 1101 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 TRIM43Q96BQ3 446 aaPredicted RBP7.3□□□□□ -1.24
CDC40-207ENST00000606893 ANKRD36BP1Q96IX9 119 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 APOL5Q9BWW9 433 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 DNAI2Q9GZS0 605 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 ST6GALNAC4Q9H4F1 302 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 TMEM134Q9H6X4 195 aa7.3□□□□□ -1.24
CDC40-207ENST00000606893 HCRTO43612 131 aa7.29□□□□□ -1.24
CDC40-207ENST00000606893 SHOX2O60902 331 aaPredicted RBP7.29□□□□□ -1.24
CDC40-207ENST00000606893 ATP6V1G1O75348 118 aa7.29□□□□□ -1.24
CDC40-207ENST00000606893 CABYRO75952 493 aa7.29□□□□□ -1.24
CDC40-207ENST00000606893 ABCG1P45844 678 aa7.29□□□□□ -1.24
CDC40-207ENST00000606893 SCNN1GP51170 649 aa7.29□□□□□ -1.24
CDC40-207ENST00000606893 PTENP60484 403 aa7.29□□□□□ -1.24
CDC40-207ENST00000606893 MRPS6P82932 125 aaKnown RBP7.29□□□□□ -1.24
CDC40-207ENST00000606893 TUBB2AQ13885 445 aa7.29□□□□□ -1.24
CDC40-207ENST00000606893 MBTPS1Q14703 1052 aa7.29□□□□□ -1.24
CDC40-207ENST00000606893 SLC30A9Q6PML9 568 aa7.29□□□□□ -1.24
CDC40-207ENST00000606893 ZPBP2Q6X784 338 aa7.29□□□□□ -1.24
CDC40-207ENST00000606893 LRRC8DQ7L1W4 858 aa7.29□□□□□ -1.24
CDC40-207ENST00000606893 TAS1R3Q7RTX0 852 aa7.29□□□□□ -1.24
CDC40-207ENST00000606893 KLHDC9Q8NEP7 349 aa7.29□□□□□ -1.24
CDC40-207ENST00000606893 RFFLQ8WZ73 363 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms