RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 ELOVL4Q9GZR5 314 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 TMEM8AQ9HCN3 771 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 TRPV5Q9NQA5 729 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 FAM49BQ9NUQ9 324 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 OBP2AQ9NY56 170 aa13.08□□□□□ -0.32
CTSA-210ENST00000606000 UXTQ9UBK9 157 aaPredicted RBP13.08□□□□□ -0.32
CTSA-210ENST00000606000 OTOL1A6NHN0 477 aaPredicted RBP13.07□□□□□ -0.32
CTSA-210ENST00000606000 CETN3O15182 167 aa13.07□□□□□ -0.32
CTSA-210ENST00000606000 BEST1O76090 585 aa13.07□□□□□ -0.32
CTSA-210ENST00000606000 ARSAP15289 507 aa13.07□□□□□ -0.32
CTSA-210ENST00000606000 DDX6P26196 483 aaKnown RBP eCLIP13.07□□□□□ -0.325e-8■■■■□ 19.4
CTSA-210ENST00000606000 KPNA1P52294 538 aaPredicted RBP13.07□□□□□ -0.32
CTSA-210ENST00000606000 ZXDBP98169 803 aa13.07□□□□□ -0.32
CTSA-210ENST00000606000 CBWD6Q4V339 395 aa13.07□□□□□ -0.32
CTSA-210ENST00000606000 ARHGAP29Q52LW3 1261 aa13.07□□□□□ -0.32
CTSA-210ENST00000606000 CBWD3Q5JTY5 395 aa13.07□□□□□ -0.32
CTSA-210ENST00000606000 CBWD5Q5RIA9 395 aa13.07□□□□□ -0.32
CTSA-210ENST00000606000 KLHL10Q6JEL2 608 aa13.07□□□□□ -0.32
CTSA-210ENST00000606000 ZMIZ2Q8NF64 920 aa13.07□□□□□ -0.32
CTSA-210ENST00000606000 TAF4BQ92750 862 aa13.07□□□□□ -0.32
CTSA-210ENST00000606000 CHFRQ96EP1 664 aa13.07□□□□□ -0.32
CTSA-210ENST00000606000 C8orf48Q96LL4 319 aa13.07□□□□□ -0.32
CTSA-210ENST00000606000 TSG101Q99816 390 aa13.07□□□□□ -0.32
CTSA-210ENST00000606000 ARID3AQ99856 593 aa13.07□□□□□ -0.32
CTSA-210ENST00000606000 HPS4Q9NQG7 708 aa13.07□□□□□ -0.32
CTSA-210ENST00000606000 KRT82Q9NSB4 513 aa13.07□□□□□ -0.32
CTSA-210ENST00000606000 RBM12Q9NTZ6 932 aaKnown RBP13.07□□□□□ -0.32
CTSA-210ENST00000606000 TDP1Q9NUW8 608 aa13.07□□□□□ -0.32
CTSA-210ENST00000606000 SPATA6Q9NWH7 488 aaPredicted RBP13.07□□□□□ -0.32
CTSA-210ENST00000606000 GCNT4Q9P109 453 aa13.07□□□□□ -0.32
CTSA-210ENST00000606000 TRAV19A0A0A6YYK7 116 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 SPECC1L-ADORA2AF8WAN1 911 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 CKMP06732 381 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 P4HA1P13674 534 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 ADORA2BP29275 332 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 CTHP32929 405 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 MXI1P50539 228 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 MCCD1P59942 119 aaPredicted RBP13.06□□□□□ -0.32
CTSA-210ENST00000606000 TAF10Q12962 218 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 USP4Q13107 963 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 ZNF77Q15935 545 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 TCERG1LQ5VWI1 586 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 NAIF1Q69YI7 327 aaPredicted RBP13.06□□□□□ -0.32
CTSA-210ENST00000606000 KRT39Q6A163 491 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 C1orf210Q8IVY1 113 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 SCAMP5Q8TAC9 235 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 SLC2A14Q8TDB8 520 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 WHAMMQ8TF30 809 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 JAKMIP2Q96AA8 810 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 TNIP3Q96KP6 325 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 SMOQ99835 787 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 DUSP9Q99956 384 aaKnown RBP13.06□□□□□ -0.32
CTSA-210ENST00000606000 TTLL2Q9BWV7 592 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 IMPG2Q9BZV3 1241 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 NIF3L1Q9GZT8 377 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 EBF3Q9H4W6 596 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 GKN1Q9NS71 199 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 CHMP5Q9NZZ3 219 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 HOOK1Q9UJC3 728 aaKnown RBP13.06□□□□□ -0.32
CTSA-210ENST00000606000 CTNND2Q9UQB3 1225 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 R4GN57 208 aa13.06□□□□□ -0.32
CTSA-210ENST00000606000 ZNF840PA6NDX5 716 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 PPP1R3GB7ZBB8 358 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 SCAMP3O14828 347 aaKnown RBP13.05□□□□□ -0.32
CTSA-210ENST00000606000 SLC16A3O15427 465 aaKnown RBP13.05□□□□□ -0.32
CTSA-210ENST00000606000 AP1G2O75843 785 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 ABL1P00519 1130 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 USP17L7P0C7H9 530 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 NBL1P41271 181 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 PGFP49763 221 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 SLC5A3P53794 718 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 STX17P56962 302 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 FKBP3Q00688 224 aaKnown RBP13.05□□□□□ -0.32
CTSA-210ENST00000606000 LRRC63Q05C16 580 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 ENPEPQ07075 957 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 INCA1Q0VD86 236 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 MORC3Q14149 939 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 MTF1Q14872 753 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 PON2Q15165 354 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 CAMK4Q16566 473 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 ZNF394Q53GI3 561 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 TTI2Q6NXR4 508 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 TSSK4Q6SA08 328 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 ASCL5Q7RTU5 278 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 GPRIN1Q7Z2K8 1008 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 ELOA2Q8IYF1 753 aaPredicted RBP13.05□□□□□ -0.32
CTSA-210ENST00000606000 CRYBG2Q8N1P7 616 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 NELFBQ8WX92 580 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 TATDN2Q93075 761 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 CLDN23Q96B33 292 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 SMARCD1Q96GM5 515 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 FAM83CQ9BQN1 747 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 OSBPL6Q9BZF3 934 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 RNF38Q9H0F5 515 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 KIF9Q9HAQ2 790 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 DMAP1Q9NPF5 467 aaPredicted RBP13.05□□□□□ -0.32
CTSA-210ENST00000606000 WNT6Q9Y6F9 365 aa13.05□□□□□ -0.32
CTSA-210ENST00000606000 MYH10P35580 1976 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 MAN2B1O00754 1011 aa13.04□□□□□ -0.32
CTSA-210ENST00000606000 TNFRSF10BO14763 440 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms