RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 NPHS2Q9NP85 383 aa21.18■□□□□ 0.98
SHKBP1-225ENST00000600733 NOP53Q9NZM5 478 aaKnown RBP21.18■□□□□ 0.98
SHKBP1-225ENST00000600733 SLC17A7Q9P2U7 560 aa21.18■□□□□ 0.98
SHKBP1-225ENST00000600733 CHMP2BQ9UQN3 213 aa21.18■□□□□ 0.98
SHKBP1-225ENST00000600733 DCTN3O75935 186 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 T-ENOLP0DO92 83 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 RBP3P10745 1247 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 ALDH3A1P30838 453 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 ATP11AP98196 1134 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 NPNTQ6UXI9 565 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 DLK2Q6UY11 383 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 AEBP2Q6ZN18 517 aaPredicted RBP21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 RIOX2Q8IUF8 465 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 IGDCC3Q8IVU1 814 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 PDIK1LQ8N165 341 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 C1orf127Q8N9H9 656 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 SLC4A11Q8NBS3 891 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 SPATA18Q8TC71 538 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 DCAKDQ8WVC6 231 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 GPR20Q99678 358 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 BCO2Q9BYV7 579 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 CYLDQ9NQC7 956 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 FETUBQ9UGM5 382 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 IGKV6-21A0A0C4DH24 114 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 APOC4-APOC2K7ER74 178 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 FZD9O00144 591 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 ACKR2O00590 384 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 CBX6O95503 412 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 APOC2P02655 101 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 TGFB3P10600 412 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 KLHL38Q2WGJ6 581 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 RAB6CQ53S08 254 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 PLEKHG4Q58EX7 1191 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 SH3PXD2AQ5TCZ1 1133 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 CMASQ8NFW8 434 aaPredicted RBP21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 RAB3IPQ96QF0 476 aaPredicted RBP21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 FRMD8P1Q9BZ68 369 aaPredicted RBP21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 ELOVL4Q9GZR5 314 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 RAB6CQ9H0N0 254 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 CDT1Q9H211 546 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 ALG13Q9NP73 1137 aaKnown RBP21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 SSU72Q9NP77 194 aaKnown RBP21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 USP18Q9UMW8 372 aa21.17■□□□□ 0.98
SHKBP1-225ENST00000600733 PIK3R2O00459 728 aa21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 DIAPH2O60879 1101 aa21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 MICAL2O94851 1124 aa21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 IQCF3P0C7M6 154 aa21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 SEPT7Q16181 437 aaKnown RBP21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 SH3D19Q5HYK7 790 aa21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 DPH6Q7L8W6 267 aa21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 ZC3H18Q86VM9 953 aaKnown RBP21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 ZNF276Q8N554 614 aa21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 PEBP4Q96S96 227 aa21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 PHACTR1Q9C0D0 580 aa21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 SPATC1LQ9H0A9 340 aa21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 C2orf40Q9H1Z8 148 aa21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 FZD8Q9H461 694 aa21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 NUMBLQ9Y6R0 609 aa21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 PCNTO95613 3336 aa21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 NOP56O00567 594 aaKnown RBP21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 MCF2LO15068 1137 aa21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 CSDE1O75534 798 aaKnown RBP21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 ZBTB7AO95365 584 aa21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 TRUB2O95900 331 aaKnown RBP21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 CLCN3P51790 818 aa21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 PTPN11Q06124 597 aaPredicted RBP21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 OVGP1Q12889 678 aa21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 DPYSL3Q14195 570 aa21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 NOL9Q5SY16 702 aaKnown RBP21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 BANPQ8N9N5 519 aa21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 RPF1Q9H9Y2 349 aaKnown RBP21.16■□□□□ 0.98
SHKBP1-225ENST00000600733 M0QYV0 167 aa21.15■□□□□ 0.98
SHKBP1-225ENST00000600733 ATP5HO75947 161 aa21.15■□□□□ 0.98
SHKBP1-225ENST00000600733 RNF8O76064 485 aa21.15■□□□□ 0.98
SHKBP1-225ENST00000600733 ITGB3P05106 788 aa21.15■□□□□ 0.98
SHKBP1-225ENST00000600733 PGK2P07205 417 aa21.15■□□□□ 0.98
SHKBP1-225ENST00000600733 ELK3P41970 407 aa21.15■□□□□ 0.98
SHKBP1-225ENST00000600733 RNASELQ05823 741 aaKnown RBP21.15■□□□□ 0.98
SHKBP1-225ENST00000600733 TAF1BQ53T94 588 aaPredicted RBP21.15■□□□□ 0.98
SHKBP1-225ENST00000600733 CCDC125Q86Z20 511 aa21.15■□□□□ 0.98
SHKBP1-225ENST00000600733 KIRREL3Q8IZU9 778 aa21.15■□□□□ 0.98
SHKBP1-225ENST00000600733 EVPLQ92817 2033 aa21.15■□□□□ 0.98
SHKBP1-225ENST00000600733 SLC7A6OSQ96CW6 309 aaPredicted RBP21.15■□□□□ 0.98
SHKBP1-225ENST00000600733 WDR35Q9P2L0 1181 aa21.15■□□□□ 0.98
SHKBP1-225ENST00000600733 DCTN4Q9UJW0 460 aa21.15■□□□□ 0.98
SHKBP1-225ENST00000600733 VGLL4Q14135 290 aa21.15■□□□□ 0.98
SHKBP1-225ENST00000600733 FAM102AQ5T9C2 384 aaPredicted RBP21.15■□□□□ 0.98
SHKBP1-225ENST00000600733 NLRP9Q7RTR0 991 aa21.15■□□□□ 0.98
SHKBP1-225ENST00000600733 PTPRN2Q92932 1015 aa21.15■□□□□ 0.98
SHKBP1-225ENST00000600733 ASCC2Q9H1I8 757 aaPredicted RBP21.15■□□□□ 0.98
SHKBP1-225ENST00000600733 PTPRFP10586 1907 aa21.14■□□□□ 0.97
SHKBP1-225ENST00000600733 GPR25O00155 361 aa21.14■□□□□ 0.97
SHKBP1-225ENST00000600733 GAS2O43903 313 aaKnown RBP21.14■□□□□ 0.97
SHKBP1-225ENST00000600733 CLNS1AP54105 237 aaKnown RBP21.14■□□□□ 0.97
SHKBP1-225ENST00000600733 MBTD1Q05BQ5 628 aa21.14■□□□□ 0.97
SHKBP1-225ENST00000600733 PARP6Q2NL67 630 aa21.14■□□□□ 0.97
SHKBP1-225ENST00000600733 UBA3Q8TBC4 463 aa21.14■□□□□ 0.97
SHKBP1-225ENST00000600733 MCRS1Q96EZ8 462 aa21.14■□□□□ 0.97
SHKBP1-225ENST00000600733 RSRC1Q96IZ7 334 aaKnown RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms