RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 ERCC5P28715 1186 aaPredicted RBP16.71■□□□□ 0.27
RPS28-203ENST00000600659 VCPP55072 806 aaKnown RBP16.71■□□□□ 0.27
RPS28-203ENST00000600659 LRMPQ12912 555 aa16.71■□□□□ 0.27
RPS28-203ENST00000600659 ZNF394Q53GI3 561 aa16.71■□□□□ 0.27
RPS28-203ENST00000600659 WDR44Q5JSH3 913 aa16.71■□□□□ 0.27
RPS28-203ENST00000600659 CLEC20AQ6ZU45 233 aa16.71■□□□□ 0.27
RPS28-203ENST00000600659 ARHGEF19Q8IW93 802 aa16.71■□□□□ 0.27
RPS28-203ENST00000600659 CCDC150Q8NCX0 1101 aa16.71■□□□□ 0.27
RPS28-203ENST00000600659 GCNAQ96QF7 691 aa16.71■□□□□ 0.27
RPS28-203ENST00000600659 DMAP1Q9NPF5 467 aaPredicted RBP16.71■□□□□ 0.27
RPS28-203ENST00000600659 TMEM63CQ9P1W3 806 aa16.71■□□□□ 0.27
RPS28-203ENST00000600659 CA14Q9ULX7 337 aa16.71■□□□□ 0.27
RPS28-203ENST00000600659 CCL26Q9Y258 94 aa16.71■□□□□ 0.27
RPS28-203ENST00000600659 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.71■□□□□ 0.27
RPS28-203ENST00000600659 FAM92AA1XBS5 289 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 AP1G2O75843 785 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 MBD3O95983 291 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 ANXA13P27216 316 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 SLC5A3P53794 718 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 FCHO2Q0JRZ9 810 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 TAF12Q16514 161 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 ARHGAP15Q53QZ3 475 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 PPP1R26Q5T8A7 1209 aaPredicted RBP16.7■□□□□ 0.26
RPS28-203ENST00000600659 GPRIN1Q7Z2K8 1008 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 MON1AQ86VX9 555 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 MFSD6LQ8IWD5 586 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 CMTM8Q8IZV2 173 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 SIX5Q8N196 739 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 MAB21L3Q8N8X9 362 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 DEPDC1BQ8WUY9 529 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 CYFIP2Q96F07 1278 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 KREMEN1Q96MU8 473 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 MED10Q9BTT4 135 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 THAP9Q9H5L6 903 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 ARHGEF3Q9NR81 526 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 ATP8B3O60423 1300 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 C2orf78A6NCI8 922 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 SOBPA7XYQ1 873 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 FGFR1OPO95684 399 aaKnown RBP16.7■□□□□ 0.26
RPS28-203ENST00000600659 PSMC3P17980 439 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 COL9A1P20849 921 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 DDX6P26196 483 aaKnown RBP eCLIP16.7■□□□□ 0.26
RPS28-203ENST00000600659 ADORA2BP29275 332 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 ZXDBP98169 803 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 C11orf57Q6ZUT1 292 aaPredicted RBP16.7■□□□□ 0.26
RPS28-203ENST00000600659 TMEM105Q8N8V8 129 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 EHBP1Q8NDI1 1231 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 SCAMP5Q8TAC9 235 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 MRPS31Q92665 395 aaKnown RBP16.7■□□□□ 0.26
RPS28-203ENST00000600659 USP13Q92995 863 aaPredicted RBP16.7■□□□□ 0.26
RPS28-203ENST00000600659 TMEM176AQ96HP8 235 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 INTS2Q9H0H0 1204 aaKnown RBP16.7■□□□□ 0.26
RPS28-203ENST00000600659 OBP2AQ9NY56 170 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 ZMYM5Q9UJ78 669 aa16.7■□□□□ 0.26
RPS28-203ENST00000600659 ZNF840PA6NDX5 716 aa16.69■□□□□ 0.26
RPS28-203ENST00000600659 OLFM2O95897 454 aa16.69■□□□□ 0.26
RPS28-203ENST00000600659 ZDHHC11BP0C7U3 371 aa16.69■□□□□ 0.26
RPS28-203ENST00000600659 TBXAS1P24557 533 aaPredicted RBP16.69■□□□□ 0.26
RPS28-203ENST00000600659 PGFP49763 221 aa16.69■□□□□ 0.26
RPS28-203ENST00000600659 MAP3K7CLP57077 242 aa16.69■□□□□ 0.26
RPS28-203ENST00000600659 TAF10Q12962 218 aa16.69■□□□□ 0.26
RPS28-203ENST00000600659 CT47A1Q5JQC4 288 aaPredicted RBP16.69■□□□□ 0.26
RPS28-203ENST00000600659 MIIPQ5JXC2 388 aa16.69■□□□□ 0.26
RPS28-203ENST00000600659 CCDC183Q5T5S1 534 aa16.69■□□□□ 0.26
RPS28-203ENST00000600659 ARHGAP17Q68EM7 881 aa16.69■□□□□ 0.26
RPS28-203ENST00000600659 PHLDB3Q6NSJ2 640 aa16.69■□□□□ 0.26
RPS28-203ENST00000600659 NUP93Q8N1F7 819 aa16.69■□□□□ 0.26
RPS28-203ENST00000600659 TTC39CQ8N584 583 aa16.69■□□□□ 0.26
RPS28-203ENST00000600659 NT5C1BQ96P26 610 aa16.69■□□□□ 0.26
RPS28-203ENST00000600659 ZSWIM1Q9BR11 485 aa16.69■□□□□ 0.26
RPS28-203ENST00000600659 DDX23Q9BUQ8 820 aaKnown RBP16.69■□□□□ 0.26
RPS28-203ENST00000600659 TRMT61BQ9BVS5 477 aaKnown RBP16.69■□□□□ 0.26
RPS28-203ENST00000600659 TRPV5Q9NQA5 729 aa16.69■□□□□ 0.26
RPS28-203ENST00000600659 SAMSN1Q9NSI8 373 aaKnown RBP16.69■□□□□ 0.26
RPS28-203ENST00000600659 DACH1Q9UI36 760 aa16.69■□□□□ 0.26
RPS28-203ENST00000600659 FBXL21Q9UKT6 434 aa16.69■□□□□ 0.26
RPS28-203ENST00000600659 CACNA1HO95180 2353 aa16.68■□□□□ 0.26
RPS28-203ENST00000600659 RNF225M0QZC1 329 aaPredicted RBP16.68■□□□□ 0.26
RPS28-203ENST00000600659 OAS1P00973 400 aaKnown RBP16.68■□□□□ 0.26
RPS28-203ENST00000600659 FAM200BP0CF97 657 aa16.68■□□□□ 0.26
RPS28-203ENST00000600659 GDI1P31150 447 aa16.68■□□□□ 0.26
RPS28-203ENST00000600659 ZNF132P52740 706 aa16.68■□□□□ 0.26
RPS28-203ENST00000600659 STARD6P59095 220 aa16.68■□□□□ 0.26
RPS28-203ENST00000600659 APBA1Q02410 837 aa16.68■□□□□ 0.26
RPS28-203ENST00000600659 GCNT1Q02742 428 aa16.68■□□□□ 0.26
RPS28-203ENST00000600659 USP4Q13107 963 aa16.68■□□□□ 0.26
RPS28-203ENST00000600659 ZNF268Q14587 947 aaPredicted RBP16.68■□□□□ 0.26
RPS28-203ENST00000600659 MLF2Q15773 248 aaPredicted RBP16.68■□□□□ 0.26
RPS28-203ENST00000600659 DPY19L2P1Q6NXN4 242 aa16.68■□□□□ 0.26
RPS28-203ENST00000600659 TTC30AQ86WT1 665 aa16.68■□□□□ 0.26
RPS28-203ENST00000600659 ENOX1Q8TC92 643 aaKnown RBP16.68■□□□□ 0.26
RPS28-203ENST00000600659 DNASE1L2Q92874 299 aa16.68■□□□□ 0.26
RPS28-203ENST00000600659 E2F7Q96AV8 911 aa16.68■□□□□ 0.26
RPS28-203ENST00000600659 CYP2S1Q96SQ9 504 aa16.68■□□□□ 0.26
RPS28-203ENST00000600659 CHADO15335 359 aa16.67■□□□□ 0.26
RPS28-203ENST00000600659 PI15O43692 258 aa16.67■□□□□ 0.26
RPS28-203ENST00000600659 YWHAQP27348 245 aa16.67■□□□□ 0.26
RPS28-203ENST00000600659 AVPR2P30518 371 aa16.67■□□□□ 0.26
RPS28-203ENST00000600659 ZNF77Q15935 545 aa16.67■□□□□ 0.26
RPS28-203ENST00000600659 SLC44A4Q53GD3 710 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms