RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 HIF1AQ16665 826 aa12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 MTHFD1LQ6UB35 978 aa12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 FAM183BPQ6ZVS7 135 aa12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 XYLT1Q86Y38 959 aa12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 ARFGAP1Q8N6T3 406 aa12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 OSBPL7Q9BZF2 842 aa12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 HESX1Q9UBX0 185 aa12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 ZNFX1Q9P2E3 1918 aaKnown RBP12.09□□□□□ -0.47
ARHGEF1-220ENST00000600274 RLFQ13129 1914 aa12.08□□□□□ -0.47
ARHGEF1-220ENST00000600274 DNALI1O14645 258 aaPredicted RBP12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 AVILO75366 819 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 IL18RAPO95256 599 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 KRT7P08729 469 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 SMPD1P17405 629 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 LMNB2Q03252 620 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 PPP1R26Q5T8A7 1209 aaPredicted RBP12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 CENPUQ71F23 418 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 EXOC8Q8IYI6 725 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 DNAJB3Q8WWF6 145 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 ATXN2LQ8WWM7 1075 aaKnown RBP12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 CFAP36Q96G28 342 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 NT5C1AQ9BXI3 368 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 NSRP1Q9H0G5 558 aaKnown RBP12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 PTPRHQ9HD43 1115 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 SUFUQ9UMX1 484 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 DNAJC25-GNG10A0A024R161 153 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 IGKV6-21A0A0C4DH24 114 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 CLGNO14967 610 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 CCDC130P13994 396 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 CYP2B6P20813 491 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 KDELR1P24390 212 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 RBP5P82980 135 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 TNFAIP2Q03169 654 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 DNAJC3Q13217 504 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 RHBDF2Q6PJF5 856 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 BBOF1Q8ND07 529 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 CLEC4CQ8WTT0 213 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 DPEP3Q9H4B8 488 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 SIGLEC16A6NMB1 481 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 CHUKO15111 745 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 TSPAN1O60635 241 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 CDH16O75309 829 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 MYL3P08590 195 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 ATP5DP30049 168 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 ZNF484Q5JVG2 852 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 TAPT1Q6NXT6 567 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 ALLCQ8N6M5 410 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 P3H4Q92791 437 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 ABCF3Q9NUQ8 709 aa12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 XPO7Q9UIA9 1087 aaKnown RBP12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.08□□□□□ -0.48
ARHGEF1-220ENST00000600274 DNM1LO00429 736 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 KCNN4O15554 427 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 ASAP2O43150 1006 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 CILPO75339 1184 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 CYP2C9P11712 490 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 ACAT1P24752 427 aaKnown RBP12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 C3orf62Q6ZUJ4 267 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 SYDE1Q6ZW31 735 aaPredicted RBP12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 CEP41Q9BYV8 373 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 DHX35Q9H5Z1 703 aaKnown RBP12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 ASNSD1Q9NWL6 643 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 DDX56Q9NY93 547 aaKnown RBP12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 A0A1W2PPM1 405 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 CTSHP09668 335 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 KLRC2P26717 231 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 SLC26A2P50443 739 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 CAV1Q03135 178 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 FAM47CQ5HY64 1035 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 PMF1Q6P1K2 205 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 VSTM1Q6UX27 236 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 GPR142Q7Z601 462 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 FBXO36Q8NEA4 188 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 FAM172AQ8WUF8 416 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 FAF2Q96CS3 445 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 ZMAT2Q96NC0 199 aaKnown RBP12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 SERPINB12Q96P63 405 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 TRABDQ9H4I3 376 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 RAB6BQ9NRW1 208 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 KCNH4Q9UQ05 1017 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 MAD1L1Q9Y6D9 718 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 IKBKGQ9Y6K9 419 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 MAGEB2O15479 319 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 MCF2P10911 925 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 GPD1P21695 349 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 RPL22P35268 128 aaKnown RBP12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 MSS51Q4VC12 460 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 FNBP1LQ5T0N5 605 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 ZNF618Q5T7W0 954 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 PPP1R21Q6ZMI0 780 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 CCDC125Q86Z20 511 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 KIF2BQ8N4N8 673 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 BRI3BPQ8WY22 251 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 PEBP4Q96S96 227 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 SMC6Q96SB8 1091 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 ZNF518BQ9C0D4 1074 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 SEPT10Q9P0V9 454 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 BARX2Q9UMQ3 279 aaPredicted RBP12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 CNTN6Q9UQ52 1028 aa12.07□□□□□ -0.48
ARHGEF1-220ENST00000600274 SNAI1O95863 264 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 160.3 ms