RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 NAP1L5Q96NT1 182 aaPredicted RBP21.53■■□□□ 1.04
PNKP-211ENST00000598020 TTLL2Q9BWV7 592 aa21.53■■□□□ 1.04
PNKP-211ENST00000598020 STK33Q9BYT3 514 aa21.53■■□□□ 1.04
PNKP-211ENST00000598020 UBXN6Q9BZV1 441 aa21.53■■□□□ 1.04
PNKP-211ENST00000598020 GPR88Q9GZN0 384 aa21.53■■□□□ 1.04
PNKP-211ENST00000598020 ZNF334Q9HCZ1 680 aaPredicted RBP21.53■■□□□ 1.04
PNKP-211ENST00000598020 COMMD8Q9NX08 183 aa21.53■■□□□ 1.04
PNKP-211ENST00000598020 IL37Q9NZH6 218 aa21.53■■□□□ 1.04
PNKP-211ENST00000598020 UNC80Q8N2C7 3258 aa21.52■■□□□ 1.04
PNKP-211ENST00000598020 FOXN3O00409 490 aaPredicted RBP21.52■■□□□ 1.04
PNKP-211ENST00000598020 TNFRSF10BO14763 440 aa21.52■■□□□ 1.04
PNKP-211ENST00000598020 BEST1O76090 585 aa21.52■■□□□ 1.04
PNKP-211ENST00000598020 CD19P15391 556 aa21.52■■□□□ 1.04
PNKP-211ENST00000598020 MTMR3Q13615 1198 aa21.52■■□□□ 1.04
PNKP-211ENST00000598020 GAREM2Q75VX8 874 aa21.52■■□□□ 1.04
PNKP-211ENST00000598020 FAM71AQ8IYT1 594 aa21.52■■□□□ 1.04
PNKP-211ENST00000598020 ZDHHC14Q8IZN3 488 aa21.52■■□□□ 1.04
PNKP-211ENST00000598020 NUP93Q8N1F7 819 aa21.52■■□□□ 1.04
PNKP-211ENST00000598020 PLCD3Q8N3E9 789 aa21.52■■□□□ 1.04
PNKP-211ENST00000598020 ADAMTS19Q8TE59 1207 aa21.52■■□□□ 1.04
PNKP-211ENST00000598020 RPGRIP1Q96KN7 1286 aa21.52■■□□□ 1.04
PNKP-211ENST00000598020 ZSWIM1Q9BR11 485 aa21.52■■□□□ 1.04
PNKP-211ENST00000598020 FAM207AQ9NSI2 230 aaPredicted RBP21.52■■□□□ 1.04
PNKP-211ENST00000598020 EPS15L1Q9UBC2 864 aa21.52■■□□□ 1.04
PNKP-211ENST00000598020 CDH7Q9ULB5 785 aa21.52■■□□□ 1.04
PNKP-211ENST00000598020 PATJQ8NI35 1801 aa21.51■■□□□ 1.03
PNKP-211ENST00000598020 ZNF638Q14966 1978 aaKnown RBP21.51■■□□□ 1.03
PNKP-211ENST00000598020 F11P03951 625 aa21.51■■□□□ 1.03
PNKP-211ENST00000598020 MYL4P12829 197 aa21.51■■□□□ 1.03
PNKP-211ENST00000598020 CDC25CP30307 473 aa21.51■■□□□ 1.03
PNKP-211ENST00000598020 MAP3K7CLP57077 242 aa21.51■■□□□ 1.03
PNKP-211ENST00000598020 DRAP1Q14919 205 aaPredicted RBP21.51■■□□□ 1.03
PNKP-211ENST00000598020 MEA1Q16626 185 aa21.51■■□□□ 1.03
PNKP-211ENST00000598020 PKDCCQ504Y2 493 aa21.51■■□□□ 1.03
PNKP-211ENST00000598020 TDRD5Q8NAT2 981 aaKnown RBP21.51■■□□□ 1.03
PNKP-211ENST00000598020 SHKBP1Q8TBC3 707 aa21.51■■□□□ 1.03
PNKP-211ENST00000598020 FGF13Q92913 245 aa21.51■■□□□ 1.03
PNKP-211ENST00000598020 TCEAL4Q96EI5 215 aa21.51■■□□□ 1.03
PNKP-211ENST00000598020 MYADMQ96S97 322 aa21.51■■□□□ 1.03
PNKP-211ENST00000598020 GDE1Q9NZC3 331 aa21.51■■□□□ 1.03
PNKP-211ENST00000598020 TSPAN16Q9UKR8 245 aa21.51■■□□□ 1.03
PNKP-211ENST00000598020 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.51■■□□□ 1.033e-6■■■■□ 21.1
PNKP-211ENST00000598020 DENND4CQ5VZ89 1909 aa21.51■■□□□ 1.03
PNKP-211ENST00000598020 SOBPA7XYQ1 873 aa21.5■■□□□ 1.03
PNKP-211ENST00000598020 C2CD4DB7Z1M9 353 aa21.5■■□□□ 1.03
PNKP-211ENST00000598020 HHLA1C9JL84 531 aa21.5■■□□□ 1.03
PNKP-211ENST00000598020 EPHB6O15197 1021 aa21.5■■□□□ 1.03
PNKP-211ENST00000598020 RTN3O95197 1032 aaPredicted RBP21.5■■□□□ 1.03
PNKP-211ENST00000598020 GABRR2P28476 465 aa21.5■■□□□ 1.03
PNKP-211ENST00000598020 UBASH3AP57075 661 aa21.5■■□□□ 1.03
PNKP-211ENST00000598020 POLR2FP61218 127 aaKnown RBP21.5■■□□□ 1.03
PNKP-211ENST00000598020 RAPGEF1Q13905 1077 aa21.5■■□□□ 1.03
PNKP-211ENST00000598020 GET4Q7L5D6 327 aaPredicted RBP21.5■■□□□ 1.03
PNKP-211ENST00000598020 TMEM150AQ86TG1 271 aa21.5■■□□□ 1.03
PNKP-211ENST00000598020 TTC30AQ86WT1 665 aa21.5■■□□□ 1.03
PNKP-211ENST00000598020 NPAS3Q8IXF0 933 aa21.5■■□□□ 1.03
PNKP-211ENST00000598020 STKLD1Q8NE28 680 aa21.5■■□□□ 1.03
PNKP-211ENST00000598020 NEK11Q8NG66 645 aa21.5■■□□□ 1.03
PNKP-211ENST00000598020 ANP32EQ9BTT0 268 aa21.5■■□□□ 1.03
PNKP-211ENST00000598020 HESX1Q9UBX0 185 aa21.5■■□□□ 1.03
PNKP-211ENST00000598020 ZMYM5Q9UJ78 669 aa21.5■■□□□ 1.03
PNKP-211ENST00000598020 MAGED2Q9UNF1 606 aaPredicted RBP21.5■■□□□ 1.03
PNKP-211ENST00000598020 TTC28Q96AY4 2481 aa21.5■■□□□ 1.03
PNKP-211ENST00000598020 FAM92AA1XBS5 289 aa21.49■■□□□ 1.03
PNKP-211ENST00000598020 F8VZ95 297 aa21.49■■□□□ 1.03
PNKP-211ENST00000598020 CYP26A1O43174 497 aa21.49■■□□□ 1.03
PNKP-211ENST00000598020 LAMP2P13473 410 aa21.49■■□□□ 1.03
PNKP-211ENST00000598020 CEBPBP17676 345 aa21.49■■□□□ 1.03
PNKP-211ENST00000598020 BRD2P25440 801 aaKnown RBP21.49■■□□□ 1.03
PNKP-211ENST00000598020 GBP2P32456 591 aaPredicted RBP21.49■■□□□ 1.03
PNKP-211ENST00000598020 CLCN1P35523 988 aa21.49■■□□□ 1.03
PNKP-211ENST00000598020 PPP3CCP48454 512 aa21.49■■□□□ 1.03
PNKP-211ENST00000598020 BCAT1P54687 386 aa21.49■■□□□ 1.03
PNKP-211ENST00000598020 JAM2P57087 298 aa21.49■■□□□ 1.03
PNKP-211ENST00000598020 SLC8A3P57103 927 aa21.49■■□□□ 1.03
PNKP-211ENST00000598020 BPIFB4P59827 614 aa21.49■■□□□ 1.03
PNKP-211ENST00000598020 USP46P62068 366 aa21.49■■□□□ 1.03
PNKP-211ENST00000598020 PTK2Q05397 1052 aa21.49■■□□□ 1.03
PNKP-211ENST00000598020 GOLGA7BQ2TAP0 167 aa21.49■■□□□ 1.03
PNKP-211ENST00000598020 ZNF606Q8WXB4 792 aa21.49■■□□□ 1.03
PNKP-211ENST00000598020 PCMTD1Q96MG8 357 aaPredicted RBP21.49■■□□□ 1.03
PNKP-211ENST00000598020 C5orf42Q9H799 3197 aa21.48■■□□□ 1.03
PNKP-211ENST00000598020 A0A1W2PRU2 124 aa21.48■■□□□ 1.03
PNKP-211ENST00000598020 NRG2O14511 850 aaPredicted RBP21.48■■□□□ 1.03
PNKP-211ENST00000598020 XPO1O14980 1071 aaKnown RBP21.48■■□□□ 1.03
PNKP-211ENST00000598020 MED7O43513 233 aa21.48■■□□□ 1.03
PNKP-211ENST00000598020 SETSIPP0DME0 302 aa21.48■■□□□ 1.03
PNKP-211ENST00000598020 YWHAQP27348 245 aa21.48■■□□□ 1.03
PNKP-211ENST00000598020 GNA15P30679 374 aa21.48■■□□□ 1.03
PNKP-211ENST00000598020 PBX1P40424 430 aa21.48■■□□□ 1.03
PNKP-211ENST00000598020 USP8P40818 1118 aa21.48■■□□□ 1.03
PNKP-211ENST00000598020 SLC5A3P53794 718 aa21.48■■□□□ 1.03
PNKP-211ENST00000598020 BST2Q10589 180 aaKnown RBP21.48■■□□□ 1.03
PNKP-211ENST00000598020 GJD3Q8N144 294 aa21.48■■□□□ 1.03
PNKP-211ENST00000598020 RNF214Q8ND24 703 aa21.48■■□□□ 1.03
PNKP-211ENST00000598020 OVCA2Q8WZ82 227 aa21.48■■□□□ 1.03
PNKP-211ENST00000598020 GCNAQ96QF7 691 aa21.48■■□□□ 1.03
PNKP-211ENST00000598020 UHRF1Q96T88 793 aaPredicted RBP21.48■■□□□ 1.03
PNKP-211ENST00000598020 ATXN3LQ9H3M9 355 aa21.48■■□□□ 1.03
PNKP-211ENST00000598020 FBXO44Q9H4M3 255 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms