RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 C12orf40Q86WS4 652 aa14.78□□□□□ -0.04
SHKBP1-208ENST00000595726 DCP1BQ8IZD4 617 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-208ENST00000595726 ADGRG2Q8IZP9 1017 aa14.78□□□□□ -0.04
SHKBP1-208ENST00000595726 C4orf32Q8N8J7 132 aa14.78□□□□□ -0.04
SHKBP1-208ENST00000595726 SPIRE2Q8WWL2 714 aa14.78□□□□□ -0.04
SHKBP1-208ENST00000595726 PNMA5Q96PV4 448 aa14.78□□□□□ -0.04
SHKBP1-208ENST00000595726 C17orf75Q9HAS0 396 aa14.78□□□□□ -0.04
SHKBP1-208ENST00000595726 SMC3Q9UQE7 1217 aa14.78□□□□□ -0.04
SHKBP1-208ENST00000595726 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-208ENST00000595726 MGAQ8IWI9 3026 aa14.77□□□□□ -0.04
SHKBP1-208ENST00000595726 NPHP3-ACAD11A0A0J9YXS1 232 aa14.77□□□□□ -0.05
SHKBP1-208ENST00000595726 TRABD2BA6NFA1 517 aa14.77□□□□□ -0.05
SHKBP1-208ENST00000595726 MYMKA6NI61 221 aa14.77□□□□□ -0.05
SHKBP1-208ENST00000595726 KAT7O95251 611 aa14.77□□□□□ -0.05
SHKBP1-208ENST00000595726 SYPP08247 313 aa14.77□□□□□ -0.05
SHKBP1-208ENST00000595726 PLS3P13797 630 aa14.77□□□□□ -0.05
SHKBP1-208ENST00000595726 FXR2P51116 673 aaKnown RBP eCLIP14.77□□□□□ -0.05
SHKBP1-208ENST00000595726 KDSRQ06136 332 aa14.77□□□□□ -0.05
SHKBP1-208ENST00000595726 SLC14A1Q13336 389 aa14.77□□□□□ -0.05
SHKBP1-208ENST00000595726 CUL4AQ13619 759 aa14.77□□□□□ -0.05
SHKBP1-208ENST00000595726 PLEKHG6Q3KR16 790 aa14.77□□□□□ -0.05
SHKBP1-208ENST00000595726 EOGTQ5NDL2 527 aa14.77□□□□□ -0.05
SHKBP1-208ENST00000595726 MCTP1Q6DN14 999 aa14.77□□□□□ -0.05
SHKBP1-208ENST00000595726 FILIP1Q7Z7B0 1213 aa14.77□□□□□ -0.05
SHKBP1-208ENST00000595726 TRIML1Q8N9V2 468 aa14.77□□□□□ -0.05
SHKBP1-208ENST00000595726 SLC39A7Q92504 469 aa14.77□□□□□ -0.05
SHKBP1-208ENST00000595726 TRMT2BQ96GJ1 504 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-208ENST00000595726 MYRFLQ96LU7 910 aa14.77□□□□□ -0.05
SHKBP1-208ENST00000595726 PNKPQ96T60 521 aa14.77□□□□□ -0.05
SHKBP1-208ENST00000595726 APOBEC2Q9Y235 224 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-208ENST00000595726 PCDHB6Q9Y5E3 794 aa14.77□□□□□ -0.05
SHKBP1-208ENST00000595726 SCN1AP35498 2009 aa14.76□□□□□ -0.05
SHKBP1-208ENST00000595726 H3BQV1 296 aa14.76□□□□□ -0.05
SHKBP1-208ENST00000595726 LEFTY2O00292 366 aa14.76□□□□□ -0.05
SHKBP1-208ENST00000595726 OGTO15294 1046 aa14.76□□□□□ -0.05
SHKBP1-208ENST00000595726 CBFA2T3O75081 653 aa14.76□□□□□ -0.05
SHKBP1-208ENST00000595726 GABRG2P18507 467 aa14.76□□□□□ -0.05
SHKBP1-208ENST00000595726 PAX3P23760 479 aa14.76□□□□□ -0.05
SHKBP1-208ENST00000595726 ACAT1P24752 427 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-208ENST00000595726 MAOBP27338 520 aa14.76□□□□□ -0.05
SHKBP1-208ENST00000595726 WASP42768 502 aa14.76□□□□□ -0.05
SHKBP1-208ENST00000595726 TAF6P49848 677 aa14.76□□□□□ -0.05
SHKBP1-208ENST00000595726 LIG4P49917 911 aa14.76□□□□□ -0.05
SHKBP1-208ENST00000595726 SMTNP53814 917 aa14.76□□□□□ -0.05
SHKBP1-208ENST00000595726 ATP2C1P98194 919 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-208ENST00000595726 KCNB1Q14721 858 aa14.76□□□□□ -0.05
SHKBP1-208ENST00000595726 TMEM132DQ14C87 1099 aa14.76□□□□□ -0.05
SHKBP1-208ENST00000595726 DHCR24Q15392 516 aa14.76□□□□□ -0.05
SHKBP1-208ENST00000595726 SPATA18Q8TC71 538 aa14.76□□□□□ -0.05
SHKBP1-208ENST00000595726 HSPA12BQ96MM6 686 aa14.76□□□□□ -0.05
SHKBP1-208ENST00000595726 ARHGEF4Q9NR80 690 aa14.76□□□□□ -0.05
SHKBP1-208ENST00000595726 CALCOCO1Q9P1Z2 691 aa14.76□□□□□ -0.05
SHKBP1-208ENST00000595726 UXTQ9UBK9 157 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-208ENST00000595726 GTF3C4Q9UKN8 822 aa14.76□□□□□ -0.05
SHKBP1-208ENST00000595726 ARHGAP26Q9UNA1 814 aa14.76□□□□□ -0.05
SHKBP1-208ENST00000595726 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-208ENST00000595726 IGHV1OR15-9A0A0B4J2B8 117 aa14.75□□□□□ -0.05
SHKBP1-208ENST00000595726 GOLGA8CPA6NN73 597 aa14.75□□□□□ -0.05
SHKBP1-208ENST00000595726 APODP05090 189 aa14.75□□□□□ -0.05
SHKBP1-208ENST00000595726 PLA2G2AP14555 144 aa14.75□□□□□ -0.05
SHKBP1-208ENST00000595726 GUCY2CP25092 1073 aa14.75□□□□□ -0.05
SHKBP1-208ENST00000595726 ACOT2P49753 483 aa14.75□□□□□ -0.05
SHKBP1-208ENST00000595726 RPL10AP62906 217 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-208ENST00000595726 ZRSR1Q15695 479 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-208ENST00000595726 SCARA3Q6AZY7 606 aa14.75□□□□□ -0.05
SHKBP1-208ENST00000595726 RHBDF2Q6PJF5 856 aa14.75□□□□□ -0.05
SHKBP1-208ENST00000595726 SLC36A4Q6YBV0 504 aa14.75□□□□□ -0.05
SHKBP1-208ENST00000595726 TMPRSS7Q7RTY8 843 aa14.75□□□□□ -0.05
SHKBP1-208ENST00000595726 SCN4BQ8IWT1 228 aa14.75□□□□□ -0.05
SHKBP1-208ENST00000595726 RGL4Q8IZJ4 473 aa14.75□□□□□ -0.05
SHKBP1-208ENST00000595726 SETD7Q8WTS6 366 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-208ENST00000595726 UBL7Q96S82 380 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-208ENST00000595726 MSTO1Q9BUK6 570 aa14.75□□□□□ -0.05
SHKBP1-208ENST00000595726 IL21RQ9HBE5 538 aa14.75□□□□□ -0.05
SHKBP1-208ENST00000595726 CD93Q9NPY3 652 aa14.75□□□□□ -0.05
SHKBP1-208ENST00000595726 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-208ENST00000595726 DPP3Q9NY33 737 aa14.75□□□□□ -0.05
SHKBP1-208ENST00000595726 CPSF3Q9UKF6 684 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-208ENST00000595726 PCOLCE2Q9UKZ9 415 aa14.75□□□□□ -0.05
SHKBP1-208ENST00000595726 STK24Q9Y6E0 443 aa14.75□□□□□ -0.05
SHKBP1-208ENST00000595726 HELZP42694 1942 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 A0A087WV48 116 aa14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 A0A0B4J269 797 aa14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 A0A1W2PQD8 194 aa14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 FAM149AA5PLN7 773 aa14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 KPNA7A9QM74 516 aa14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 HCRTO43612 131 aa14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 ATXN1LP0C7T5 689 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 TCF3P15923 654 aa14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 TSPY1Q01534 308 aa14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 PDIA5Q14554 519 aa14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 IL17AQ16552 155 aa14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 NFE2Q16621 373 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 RILPL1Q5EBL4 403 aa14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 LARP1BQ659C4 914 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 RABEPKQ7Z6M1 372 aa14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 IGSF22Q8N9C0 903 aa14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 PIP4K2CQ8TBX8 421 aa14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 DCBLD2Q96PD2 775 aa14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 TSPAN18Q96SJ8 248 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms