RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 PALMO75781 387 aa14.22□□□□□ -0.13
VMP1-217ENST00000593168 GALTP07902 379 aa14.22□□□□□ -0.13
VMP1-217ENST00000593168 RRM1P23921 792 aa14.22□□□□□ -0.13
VMP1-217ENST00000593168 DLX2Q07687 328 aaPredicted RBP14.22□□□□□ -0.13
VMP1-217ENST00000593168 ELAVL2Q12926 359 aaKnown RBP14.22□□□□□ -0.13
VMP1-217ENST00000593168 TUBB2AQ13885 445 aa14.22□□□□□ -0.13
VMP1-217ENST00000593168 CLUL1Q15846 466 aa14.22□□□□□ -0.13
VMP1-217ENST00000593168 PAPD7Q5XG87 772 aaKnown RBP14.22□□□□□ -0.13
VMP1-217ENST00000593168 THEM5Q8N1Q8 247 aa14.22□□□□□ -0.13
VMP1-217ENST00000593168 LRRC57Q8N9N7 239 aa14.22□□□□□ -0.13
VMP1-217ENST00000593168 UBA3Q8TBC4 463 aa14.22□□□□□ -0.13
VMP1-217ENST00000593168 HASPINQ8TF76 798 aa14.22□□□□□ -0.13
VMP1-217ENST00000593168 ZNF689Q96CS4 500 aaPredicted RBP14.22□□□□□ -0.13
VMP1-217ENST00000593168 SYT15Q9BQS2 421 aa14.22□□□□□ -0.13
VMP1-217ENST00000593168 TUBB2BQ9BVA1 445 aa14.22□□□□□ -0.13
VMP1-217ENST00000593168 NUP85Q9BW27 656 aa14.22□□□□□ -0.13
VMP1-217ENST00000593168 MIS12Q9H081 205 aa14.22□□□□□ -0.13
VMP1-217ENST00000593168 KCNH6Q9H252 994 aa14.22□□□□□ -0.13
VMP1-217ENST00000593168 OSGEPQ9NPF4 335 aa14.22□□□□□ -0.13
VMP1-217ENST00000593168 FAM49BQ9NUQ9 324 aa14.22□□□□□ -0.13
VMP1-217ENST00000593168 WDR35Q9P2L0 1181 aa14.22□□□□□ -0.13
VMP1-217ENST00000593168 FAM50BQ9Y247 325 aa14.22□□□□□ -0.13
VMP1-217ENST00000593168 PRG3Q9Y2Y8 225 aaPredicted RBP14.22□□□□□ -0.13
VMP1-217ENST00000593168 SCINQ9Y6U3 715 aa14.22□□□□□ -0.13
VMP1-217ENST00000593168 TCRBV5S1A1TA0A578 114 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 CARNS1A5YM72 827 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 GRM6O15303 877 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 OAZ2O95190 189 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 LINC00271P0C7V0 271 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 PRLRP16471 622 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 ACAT1P24752 427 aaKnown RBP14.21□□□□□ -0.13
VMP1-217ENST00000593168 CTNNB1P35222 781 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 GABRB2P47870 512 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 SLC11A1P49279 550 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 GSCP56915 257 aaPredicted RBP14.21□□□□□ -0.13
VMP1-217ENST00000593168 SNX16P57768 344 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 PLCB3Q01970 1234 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 YWHAHQ04917 246 aaPredicted RBP14.21□□□□□ -0.13
VMP1-217ENST00000593168 PDCLQ13371 301 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 ZNF268Q14587 947 aaPredicted RBP14.21□□□□□ -0.13
VMP1-217ENST00000593168 CTC1Q2NKJ3 1217 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 PTPN20Q4JDL3 420 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 OVOS1Q6IE37 1185 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 FAM171BQ6P995 826 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 TTC30AQ86WT1 665 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 ZNF564Q8TBZ8 553 aaPredicted RBP14.21□□□□□ -0.13
VMP1-217ENST00000593168 SLC35F5Q8WV83 523 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 C18orf8Q96DM3 657 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 RTP3Q9BQQ7 232 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 RC3H2Q9HBD1 1191 aaKnown RBP14.21□□□□□ -0.13
VMP1-217ENST00000593168 ABCB6Q9NP58 842 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 CRTAC1Q9NQ79 661 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 CYLDQ9NQC7 956 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 PARVAQ9NVD7 372 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 MARCH5Q9NX47 278 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 CYTH4Q9UIA0 394 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 ADAM28Q9UKQ2 775 aa14.21□□□□□ -0.13
VMP1-217ENST00000593168 FAM170AA1A519 330 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 F8W810 466 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 ATMINO43313 823 aaPredicted RBP14.2□□□□□ -0.14
VMP1-217ENST00000593168 MBTPS2O43462 519 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 BUB1BO60566 1050 aaPredicted RBP14.2□□□□□ -0.14
VMP1-217ENST00000593168 ATP2C2O75185 946 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 URI1O94763 535 aaPredicted RBP14.2□□□□□ -0.14
VMP1-217ENST00000593168 ATP1A1P05023 1023 aaKnown RBP14.2□□□□□ -0.14
VMP1-217ENST00000593168 CCDC130P13994 396 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 GTF2F1P35269 517 aaKnown RBP eCLIP14.2□□□□□ -0.14
VMP1-217ENST00000593168 BCAT1P54687 386 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 PSMC1P62191 440 aaKnown RBP14.2□□□□□ -0.14
VMP1-217ENST00000593168 BST2Q10589 180 aaKnown RBP14.2□□□□□ -0.14
VMP1-217ENST00000593168 HYAL1Q12794 435 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 MAMLD1Q13495 774 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 MAPRE1Q15691 268 aaKnown RBP14.2□□□□□ -0.14
VMP1-217ENST00000593168 SMAD2Q15796 467 aaKnown RBP14.2□□□□□ -0.14
VMP1-217ENST00000593168 C2CD6Q53TS8 623 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 INTS6LQ5JSJ4 861 aaKnown RBP14.2□□□□□ -0.14
VMP1-217ENST00000593168 MEI1Q5TIA1 1274 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 KIAA0319Q5VV43 1072 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 C11orf63Q6NUN7 778 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 TMEM110Q86TL2 294 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 CMTR2Q8IYT2 770 aaKnown RBP14.2□□□□□ -0.14
VMP1-217ENST00000593168 FUKQ8N0W3 1084 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 FIBCD1Q8N539 461 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 C3orf20Q8ND61 904 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 FEZF2Q8TBJ5 459 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 MYCBPAPQ8TBZ2 947 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 SLC2A14Q8TDB8 520 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 IPO4Q8TEX9 1081 aaKnown RBP14.2□□□□□ -0.14
VMP1-217ENST00000593168 HSFY1Q96LI6 401 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 CPXM1Q96SM3 734 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 LPIN3Q9BQK8 851 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 SLC4A5Q9BY07 1137 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 CWH43Q9H720 699 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 L2HGDHQ9H9P8 463 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 LCMT1Q9UIC8 334 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 MUTYHQ9UIF7 546 aa14.2□□□□□ -0.14
VMP1-217ENST00000593168 MYBPHLA2RUH7 354 aa14.19□□□□□ -0.14
VMP1-217ENST00000593168 C5orf67F2Z3F1 127 aa14.19□□□□□ -0.14
VMP1-217ENST00000593168 ENC1O14682 589 aa14.19□□□□□ -0.14
VMP1-217ENST00000593168 LINC01565O15544 149 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms