RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 SMG9Q9H0W8 520 aaKnown RBP18.6■□□□□ 0.57
CIRBP-235ENST00000591935 THG1LQ9NWX6 298 aaKnown RBP18.6■□□□□ 0.57
CIRBP-235ENST00000591935 NDRG2Q9UN36 371 aaKnown RBP18.6■□□□□ 0.57
CIRBP-235ENST00000591935 ANAPC1Q9H1A4 1944 aa18.6■□□□□ 0.57
CIRBP-235ENST00000591935 EP300Q09472 2414 aaPredicted RBP18.6■□□□□ 0.57
CIRBP-235ENST00000591935 BICDL2A1A5D9 508 aa18.59■□□□□ 0.57
CIRBP-235ENST00000591935 MYBPHLA2RUH7 354 aa18.59■□□□□ 0.57
CIRBP-235ENST00000591935 PSMA7O14818 248 aa18.59■□□□□ 0.57
CIRBP-235ENST00000591935 PRAMEF12O95522 483 aa18.59■□□□□ 0.57
CIRBP-235ENST00000591935 F11P03951 625 aa18.59■□□□□ 0.57
CIRBP-235ENST00000591935 DLATP10515 647 aaKnown RBP18.59■□□□□ 0.57
CIRBP-235ENST00000591935 LMO2P25791 158 aa18.59■□□□□ 0.57
CIRBP-235ENST00000591935 KPNA1P52294 538 aaPredicted RBP18.59■□□□□ 0.57
CIRBP-235ENST00000591935 PSMD6Q15008 389 aa18.59■□□□□ 0.57
CIRBP-235ENST00000591935 BMT2Q1RMZ1 405 aa18.59■□□□□ 0.57
CIRBP-235ENST00000591935 APTXQ7Z2E3 356 aaKnown RBP18.59■□□□□ 0.57
CIRBP-235ENST00000591935 XXYLT1Q8NBI6 393 aa18.59■□□□□ 0.57
CIRBP-235ENST00000591935 KBTBD7Q8WVZ9 684 aa18.59■□□□□ 0.57
CIRBP-235ENST00000591935 CCDC127Q96BQ5 260 aa18.59■□□□□ 0.57
CIRBP-235ENST00000591935 FUBP3Q96I24 572 aaKnown RBP eCLIP18.59■□□□□ 0.57
CIRBP-235ENST00000591935 ZFYVE19Q96K21 471 aa18.59■□□□□ 0.57
CIRBP-235ENST00000591935 FNBP1Q96RU3 617 aa18.59■□□□□ 0.57
CIRBP-235ENST00000591935 EXOC1Q9NV70 894 aa18.59■□□□□ 0.57
CIRBP-235ENST00000591935 UXTQ9UBK9 157 aaPredicted RBP18.59■□□□□ 0.57
CIRBP-235ENST00000591935 PCDHGA2Q9Y5H1 932 aa18.59■□□□□ 0.57
CIRBP-235ENST00000591935 ZNF292O60281 2723 aa18.59■□□□□ 0.57
CIRBP-235ENST00000591935 SPTBN4Q9H254 2564 aa18.59■□□□□ 0.57
CIRBP-235ENST00000591935 PTPRDP23468 1912 aa18.59■□□□□ 0.57
CIRBP-235ENST00000591935 CCNE1P24864 410 aa18.58■□□□□ 0.56
CIRBP-235ENST00000591935 STX17P56962 302 aa18.58■□□□□ 0.56
CIRBP-235ENST00000591935 CSTF1Q05048 431 aaKnown RBP18.58■□□□□ 0.56
CIRBP-235ENST00000591935 CYP24A1Q07973 514 aa18.58■□□□□ 0.56
CIRBP-235ENST00000591935 STK4Q13043 487 aa18.58■□□□□ 0.56
CIRBP-235ENST00000591935 KNOP1Q1ED39 458 aaKnown RBP18.58■□□□□ 0.56
CIRBP-235ENST00000591935 CFAP221Q4G0U5 840 aa18.58■□□□□ 0.56
CIRBP-235ENST00000591935 SPECC1LQ69YQ0 1117 aa18.58■□□□□ 0.56
CIRBP-235ENST00000591935 SPATA2LQ8IUW3 424 aaPredicted RBP18.58■□□□□ 0.56
CIRBP-235ENST00000591935 CELF5Q8N6W0 485 aaKnown RBP18.58■□□□□ 0.56
CIRBP-235ENST00000591935 TTC8Q8TAM2 541 aa18.58■□□□□ 0.56
CIRBP-235ENST00000591935 BPIFB1Q8TDL5 484 aa18.58■□□□□ 0.56
CIRBP-235ENST00000591935 ATRIPQ8WXE1 791 aa18.58■□□□□ 0.56
CIRBP-235ENST00000591935 FAM126AQ9BYI3 521 aaPredicted RBP18.58■□□□□ 0.56
CIRBP-235ENST00000591935 CHRDQ9H2X0 955 aa18.58■□□□□ 0.56
CIRBP-235ENST00000591935 THAP9Q9H5L6 903 aa18.58■□□□□ 0.56
CIRBP-235ENST00000591935 MAGED2Q9UNF1 606 aaPredicted RBP18.58■□□□□ 0.56
CIRBP-235ENST00000591935 FRYLO94915 3013 aa18.57■□□□□ 0.56
CIRBP-235ENST00000591935 CCP110O43303 1012 aa18.57■□□□□ 0.56
CIRBP-235ENST00000591935 PDGFRBP09619 1106 aa18.57■□□□□ 0.56
CIRBP-235ENST00000591935 FAM163BP0C2L3 166 aa18.57■□□□□ 0.56
CIRBP-235ENST00000591935 TNNI1P19237 187 aa18.57■□□□□ 0.56
CIRBP-235ENST00000591935 AVPR1AP37288 418 aa18.57■□□□□ 0.56
CIRBP-235ENST00000591935 SOX9P48436 509 aa18.57■□□□□ 0.56
CIRBP-235ENST00000591935 LRRC32Q14392 662 aa18.57■□□□□ 0.56
CIRBP-235ENST00000591935 MAPRE1Q15691 268 aaKnown RBP18.57■□□□□ 0.56
CIRBP-235ENST00000591935 FAM171BQ6P995 826 aa18.57■□□□□ 0.56
CIRBP-235ENST00000591935 C4orf50Q6ZRC1 276 aa18.57■□□□□ 0.56
CIRBP-235ENST00000591935 RALGPS2Q86X27 583 aaPredicted RBP18.57■□□□□ 0.56
CIRBP-235ENST00000591935 C12orf56Q8IXR9 622 aa18.57■□□□□ 0.56
CIRBP-235ENST00000591935 SMYD4Q8IYR2 804 aaPredicted RBP18.57■□□□□ 0.56
CIRBP-235ENST00000591935 CMTM8Q8IZV2 173 aa18.57■□□□□ 0.56
CIRBP-235ENST00000591935 KIAA0895Q8NCT3 520 aa18.57■□□□□ 0.56
CIRBP-235ENST00000591935 GOLGA5Q8TBA6 731 aa18.57■□□□□ 0.56
CIRBP-235ENST00000591935 PLEKHO2Q8TD55 490 aa18.57■□□□□ 0.56
CIRBP-235ENST00000591935 MRPS31Q92665 395 aaKnown RBP18.57■□□□□ 0.56
CIRBP-235ENST00000591935 CGRRF1Q99675 332 aa18.57■□□□□ 0.56
CIRBP-235ENST00000591935 LMAN1LQ9HAT1 526 aa18.57■□□□□ 0.56
CIRBP-235ENST00000591935 ZSCAN32Q9NX65 697 aa18.57■□□□□ 0.56
CIRBP-235ENST00000591935 CDH9Q9ULB4 789 aa18.57■□□□□ 0.56
CIRBP-235ENST00000591935 NME7Q9Y5B8 376 aa18.57■□□□□ 0.56
CIRBP-235ENST00000591935 ITIH6Q6UXX5 1313 aa18.56■□□□□ 0.56
CIRBP-235ENST00000591935 SLC38A8A6NNN8 435 aa18.56■□□□□ 0.56
CIRBP-235ENST00000591935 TUBB4AP04350 444 aa18.56■□□□□ 0.56
CIRBP-235ENST00000591935 EEF1GP26641 437 aaKnown RBP18.56■□□□□ 0.56
CIRBP-235ENST00000591935 MAGEA11P43364 429 aa18.56■□□□□ 0.56
CIRBP-235ENST00000591935 CASP4P49662 377 aa18.56■□□□□ 0.56
CIRBP-235ENST00000591935 NRLP54845 237 aa18.56■□□□□ 0.56
CIRBP-235ENST00000591935 PSMC1P62191 440 aaKnown RBP18.56■□□□□ 0.56
CIRBP-235ENST00000591935 MTAPQ13126 283 aa18.56■□□□□ 0.56
CIRBP-235ENST00000591935 ARID5BQ14865 1188 aa18.56■□□□□ 0.56
CIRBP-235ENST00000591935 DNTTIP2Q5QJE6 756 aaKnown RBP18.56■□□□□ 0.56
CIRBP-235ENST00000591935 TSSK4Q6SA08 328 aa18.56■□□□□ 0.56
CIRBP-235ENST00000591935 MAB21L3Q8N8X9 362 aa18.56■□□□□ 0.56
CIRBP-235ENST00000591935 TRMT2BQ96GJ1 504 aaKnown RBP18.56■□□□□ 0.56
CIRBP-235ENST00000591935 CEP295NLQ96MC4 621 aa18.56■□□□□ 0.56
CIRBP-235ENST00000591935 MMS19Q96T76 1030 aa18.56■□□□□ 0.56
CIRBP-235ENST00000591935 SYT15Q9BQS2 421 aa18.56■□□□□ 0.56
CIRBP-235ENST00000591935 MRPL45Q9BRJ2 306 aaKnown RBP18.56■□□□□ 0.56
CIRBP-235ENST00000591935 KIF9Q9HAQ2 790 aa18.56■□□□□ 0.56
CIRBP-235ENST00000591935 CRTAC1Q9NQ79 661 aa18.56■□□□□ 0.56
CIRBP-235ENST00000591935 PRMT8Q9NR22 394 aaPredicted RBP18.56■□□□□ 0.56
CIRBP-235ENST00000591935 GTSE1Q9NYZ3 720 aa18.56■□□□□ 0.56
CIRBP-235ENST00000591935 WARSP23381 471 aaKnown RBP18.55■□□□□ 0.56
CIRBP-235ENST00000591935 PBX1P40424 430 aa18.55■□□□□ 0.56
CIRBP-235ENST00000591935 CCR3P51677 355 aa18.55■□□□□ 0.56
CIRBP-235ENST00000591935 TNK2Q07912 1038 aa18.55■□□□□ 0.56
CIRBP-235ENST00000591935 WDR44Q5JSH3 913 aa18.55■□□□□ 0.56
CIRBP-235ENST00000591935 TXNDC8Q6A555 127 aa18.55■□□□□ 0.56
CIRBP-235ENST00000591935 TXNDC11Q6PKC3 985 aa18.55■□□□□ 0.56
CIRBP-235ENST00000591935 FAM114A1Q8IWE2 563 aa18.55■□□□□ 0.56
CIRBP-235ENST00000591935 SCN4BQ8IWT1 228 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms