RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 NT5C1BQ96P26 610 aa12.23□□□□□ -0.45
VMP1-211ENST00000591315 CYP2S1Q96SQ9 504 aa12.23□□□□□ -0.45
VMP1-211ENST00000591315 HNRNPABQ99729 332 aaKnown RBP12.23□□□□□ -0.45
VMP1-211ENST00000591315 AJAP1Q9UKB5 411 aaPredicted RBP12.23□□□□□ -0.45
VMP1-211ENST00000591315 CCL26Q9Y258 94 aa12.23□□□□□ -0.45
VMP1-211ENST00000591315 NFE2L3Q9Y4A8 694 aa12.23□□□□□ -0.45
VMP1-211ENST00000591315 MUC6Q6W4X9 2439 aa12.23□□□□□ -0.45
VMP1-211ENST00000591315 KRBA1A5PL33 1030 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 C2orf78A6NCI8 922 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 HEPACAM2A8MVW5 462 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 TNFRSF10BO14763 440 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 TRIM66O15016 1216 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 GPR37L1O60883 481 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 ANXA13P27216 316 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 CDC25CP30307 473 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 TYRO3Q06418 890 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 TAF10Q12962 218 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 MIIPQ5JXC2 388 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 SASS6Q6UVJ0 657 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 DENND5BQ6ZUT9 1274 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 MTSS1LQ765P7 747 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 UBALD2Q8IYN6 164 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 TFAP2BQ92481 460 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 TRMT2BQ96GJ1 504 aaKnown RBP12.22□□□□□ -0.45
VMP1-211ENST00000591315 SMARCD1Q96GM5 515 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 TMEM176AQ96HP8 235 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 ZSWIM1Q9BR11 485 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 TASP1Q9H6P5 420 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 ZFP14Q9HCL3 533 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 TRPC7Q9HCX4 862 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 FANCLQ9NW38 375 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 TAB2Q9NYJ8 693 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 GCNT4Q9P109 453 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 DACH1Q9UI36 760 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 CA14Q9ULX7 337 aa12.22□□□□□ -0.45
VMP1-211ENST00000591315 NUP210Q8TEM1 1887 aaPredicted RBP12.21□□□□□ -0.45
VMP1-211ENST00000591315 KCNJ18B7U540 433 aa12.21□□□□□ -0.45
VMP1-211ENST00000591315 HHLA1C9JL84 531 aa12.21□□□□□ -0.45
VMP1-211ENST00000591315 TULP2O00295 520 aa12.21□□□□□ -0.45
VMP1-211ENST00000591315 P4HA2O15460 535 aa12.21□□□□□ -0.45
VMP1-211ENST00000591315 ECI2O75521 394 aa12.21□□□□□ -0.45
VMP1-211ENST00000591315 SRFP11831 508 aa12.21□□□□□ -0.45
VMP1-211ENST00000591315 KCNJ12Q14500 433 aa12.21□□□□□ -0.45
VMP1-211ENST00000591315 STX1AQ16623 288 aa12.21□□□□□ -0.45
VMP1-211ENST00000591315 DPY19L2P1Q6NXN4 242 aa12.21□□□□□ -0.45
VMP1-211ENST00000591315 TMEM270Q6UE05 265 aa12.21□□□□□ -0.45
VMP1-211ENST00000591315 CLEC20AQ6ZU45 233 aa12.21□□□□□ -0.45
VMP1-211ENST00000591315 MON1AQ86VX9 555 aa12.21□□□□□ -0.45
VMP1-211ENST00000591315 ENOX1Q8TC92 643 aaKnown RBP12.21□□□□□ -0.45
VMP1-211ENST00000591315 NXPE3Q969Y0 559 aa12.21□□□□□ -0.45
VMP1-211ENST00000591315 PBXIP1Q96AQ6 731 aa12.21□□□□□ -0.45
VMP1-211ENST00000591315 ELSPBP1Q96BH3 223 aa12.21□□□□□ -0.45
VMP1-211ENST00000591315 ZFYVE19Q96K21 471 aa12.21□□□□□ -0.45
VMP1-211ENST00000591315 GCNAQ96QF7 691 aa12.21□□□□□ -0.45
VMP1-211ENST00000591315 TTLL2Q9BWV7 592 aa12.21□□□□□ -0.45
VMP1-211ENST00000591315 C1QTNF1Q9BXJ1 281 aa12.21□□□□□ -0.45
VMP1-211ENST00000591315 SIX2Q9NPC8 291 aa12.21□□□□□ -0.45
VMP1-211ENST00000591315 UBE2TQ9NPD8 197 aaPredicted RBP12.21□□□□□ -0.45
VMP1-211ENST00000591315 DMAP1Q9NPF5 467 aaPredicted RBP12.21□□□□□ -0.45
VMP1-211ENST00000591315 ACP6Q9NPH0 428 aa12.21□□□□□ -0.45
VMP1-211ENST00000591315 ANO10Q9NW15 660 aa12.21□□□□□ -0.45
VMP1-211ENST00000591315 CHORDC1Q9UHD1 332 aaPredicted RBP12.21□□□□□ -0.45
VMP1-211ENST00000591315 PCDHB4Q9Y5E5 795 aa12.21□□□□□ -0.45
VMP1-211ENST00000591315 PATJQ8NI35 1801 aa12.21□□□□□ -0.46
VMP1-211ENST00000591315 CACNA1HO95180 2353 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 ATP8B3O60423 1300 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 TICRRQ7Z2Z1 1910 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 ZNF840PA6NDX5 716 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 FGF19O95750 216 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 ABL1P00519 1130 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 FAM200BP0CF97 657 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 PRKCSHP14314 528 aaPredicted RBP12.2□□□□□ -0.46
VMP1-211ENST00000591315 CD19P15391 556 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 NPR3P17342 541 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 PON1P27169 355 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 GDI1P31150 447 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 SLC5A3P53794 718 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 VCPP55072 806 aaKnown RBP12.2□□□□□ -0.46
VMP1-211ENST00000591315 NCAPHQ15003 741 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 MAN2A1Q16706 1144 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 VWA3BQ502W6 1294 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 ARHGAP15Q53QZ3 475 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 TCP11X2Q5H9J9 407 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 CDKAL1Q5VV42 579 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 TRIM65Q6PJ69 517 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 TTC30AQ86WT1 665 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 CMTM8Q8IZV2 173 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 SIX5Q8N196 739 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 NUP93Q8N1F7 819 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 ARL14EPQ8N8R7 260 aaPredicted RBP12.2□□□□□ -0.46
VMP1-211ENST00000591315 TTC16Q8NEE8 873 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 UBA3Q8TBC4 463 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 MRPS31Q92665 395 aaKnown RBP12.2□□□□□ -0.46
VMP1-211ENST00000591315 USP13Q92995 863 aaPredicted RBP12.2□□□□□ -0.46
VMP1-211ENST00000591315 FAXDC2Q96IV6 333 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 TUBGCP2Q9BSJ2 902 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 RNF38Q9H0F5 515 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 HSD3B7Q9H2F3 369 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 TRPV4Q9HBA0 871 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 CSNK1G1Q9HCP0 422 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms