RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 SOBPA7XYQ1 873 aa23.73■■□□□ 1.39
MBD3-208ENST00000590830 TNFRSF10BO14763 440 aa23.73■■□□□ 1.39
MBD3-208ENST00000590830 ZNF263O14978 683 aa23.73■■□□□ 1.39
MBD3-208ENST00000590830 FMO5P49326 533 aa23.73■■□□□ 1.39
MBD3-208ENST00000590830 TCF15Q12870 199 aa23.73■■□□□ 1.39
MBD3-208ENST00000590830 TRIM59Q8IWR1 403 aa23.73■■□□□ 1.39
MBD3-208ENST00000590830 DNASE1L2Q92874 299 aa23.73■■□□□ 1.39
MBD3-208ENST00000590830 IRF7Q92985 503 aa23.73■■□□□ 1.39
MBD3-208ENST00000590830 FAXDC2Q96IV6 333 aa23.73■■□□□ 1.39
MBD3-208ENST00000590830 NT5C1AQ9BXI3 368 aa23.73■■□□□ 1.39
MBD3-208ENST00000590830 TRPV5Q9NQA5 729 aa23.73■■□□□ 1.39
MBD3-208ENST00000590830 CISHQ9NSE2 258 aa23.73■■□□□ 1.39
MBD3-208ENST00000590830 GCNT4Q9P109 453 aa23.73■■□□□ 1.39
MBD3-208ENST00000590830 RWDD2AQ9UIY3 292 aa23.73■■□□□ 1.39
MBD3-208ENST00000590830 ZMYM5Q9UJ78 669 aa23.73■■□□□ 1.39
MBD3-208ENST00000590830 MTF2Q9Y483 593 aaPredicted RBP23.73■■□□□ 1.39
MBD3-208ENST00000590830 C2orf78A6NCI8 922 aa23.72■■□□□ 1.39
MBD3-208ENST00000590830 AP1G2O75843 785 aa23.72■■□□□ 1.39
MBD3-208ENST00000590830 PRKCQQ04759 706 aa23.72■■□□□ 1.39
MBD3-208ENST00000590830 WDR44Q5JSH3 913 aa23.72■■□□□ 1.39
MBD3-208ENST00000590830 SHDQ96IW2 340 aa23.72■■□□□ 1.39
MBD3-208ENST00000590830 ZFYVE19Q96K21 471 aa23.72■■□□□ 1.39
MBD3-208ENST00000590830 KRT82Q9NSB4 513 aa23.72■■□□□ 1.39
MBD3-208ENST00000590830 ATP8B3O60423 1300 aa23.71■■□□□ 1.39
MBD3-208ENST00000590830 KANSL1LA0AUZ9 987 aa23.71■■□□□ 1.39
MBD3-208ENST00000590830 DPYSL4O14531 572 aa23.71■■□□□ 1.39
MBD3-208ENST00000590830 PMM2O15305 246 aa23.71■■□□□ 1.39
MBD3-208ENST00000590830 CHADO15335 359 aa23.71■■□□□ 1.39
MBD3-208ENST00000590830 GLULP15104 373 aa23.71■■□□□ 1.39
MBD3-208ENST00000590830 MARSP56192 900 aaKnown RBP23.71■■□□□ 1.39
MBD3-208ENST00000590830 TAF10Q12962 218 aa23.71■■□□□ 1.39
MBD3-208ENST00000590830 ZNF394Q53GI3 561 aa23.71■■□□□ 1.39
MBD3-208ENST00000590830 TPRG1Q6ZUI0 275 aa23.71■■□□□ 1.39
MBD3-208ENST00000590830 YAF2Q8IY57 180 aa23.71■■□□□ 1.39
MBD3-208ENST00000590830 NUP93Q8N1F7 819 aa23.71■■□□□ 1.39
MBD3-208ENST00000590830 CELF5Q8N6W0 485 aaKnown RBP23.71■■□□□ 1.39
MBD3-208ENST00000590830 SCAMP5Q8TAC9 235 aa23.71■■□□□ 1.39
MBD3-208ENST00000590830 LMO3Q8TAP4 145 aa23.71■■□□□ 1.39
MBD3-208ENST00000590830 GPT2Q8TD30 523 aa23.71■■□□□ 1.39
MBD3-208ENST00000590830 BPIFB1Q8TDL5 484 aa23.71■■□□□ 1.39
MBD3-208ENST00000590830 CYFIP2Q96F07 1278 aa23.71■■□□□ 1.39
MBD3-208ENST00000590830 SMARCD1Q96GM5 515 aa23.71■■□□□ 1.39
MBD3-208ENST00000590830 HNRNPABQ99729 332 aaKnown RBP23.71■■□□□ 1.39
MBD3-208ENST00000590830 CSNK1G1Q9HCP0 422 aa23.71■■□□□ 1.39
MBD3-208ENST00000590830 TRPC7Q9HCX4 862 aa23.71■■□□□ 1.39
MBD3-208ENST00000590830 DMAP1Q9NPF5 467 aaPredicted RBP23.71■■□□□ 1.39
MBD3-208ENST00000590830 TDP1Q9NUW8 608 aa23.71■■□□□ 1.39
MBD3-208ENST00000590830 IL37Q9NZH6 218 aa23.71■■□□□ 1.39
MBD3-208ENST00000590830 DLGAP2Q9P1A6 1054 aa23.71■■□□□ 1.39
MBD3-208ENST00000590830 GREB1Q4ZG55 1949 aa23.71■■□□□ 1.39
MBD3-208ENST00000590830 ZNF840PA6NDX5 716 aa23.7■■□□□ 1.38
MBD3-208ENST00000590830 DCNP07585 359 aaKnown RBP23.7■■□□□ 1.38
MBD3-208ENST00000590830 ADORA2BP29275 332 aa23.7■■□□□ 1.38
MBD3-208ENST00000590830 AVPR1AP37288 418 aa23.7■■□□□ 1.38
MBD3-208ENST00000590830 RAD23BP54727 409 aa23.7■■□□□ 1.38
MBD3-208ENST00000590830 LRMPQ12912 555 aa23.7■■□□□ 1.38
MBD3-208ENST00000590830 ARL14EPQ8N8R7 260 aaPredicted RBP23.7■■□□□ 1.38
MBD3-208ENST00000590830 MLKLQ8NB16 471 aa23.7■■□□□ 1.38
MBD3-208ENST00000590830 SLC4A11Q8NBS3 891 aa23.7■■□□□ 1.38
MBD3-208ENST00000590830 PJA1Q8NG27 643 aa23.7■■□□□ 1.38
MBD3-208ENST00000590830 NUP62CLQ9H1M0 184 aa23.7■■□□□ 1.38
MBD3-208ENST00000590830 TRPM5Q9NZQ8 1165 aa23.7■■□□□ 1.38
MBD3-208ENST00000590830 SIT1Q9Y3P8 196 aa23.7■■□□□ 1.38
MBD3-208ENST00000590830 GALR2O43603 387 aaPredicted RBP23.69■■□□□ 1.38
MBD3-208ENST00000590830 GNA14O95837 355 aa23.69■■□□□ 1.38
MBD3-208ENST00000590830 YWHAQP27348 245 aa23.69■■□□□ 1.38
MBD3-208ENST00000590830 NUBP1P53384 320 aa23.69■■□□□ 1.38
MBD3-208ENST00000590830 MAP3K7CLP57077 242 aa23.69■■□□□ 1.38
MBD3-208ENST00000590830 KCNH2Q12809 1159 aa23.69■■□□□ 1.38
MBD3-208ENST00000590830 CUL2Q13617 745 aa23.69■■□□□ 1.38
MBD3-208ENST00000590830 IRF2BP1Q8IU81 584 aa23.69■■□□□ 1.38
MBD3-208ENST00000590830 ZNF687Q8N1G0 1237 aa23.69■■□□□ 1.38
MBD3-208ENST00000590830 GBP4Q96PP9 640 aa23.69■■□□□ 1.38
MBD3-208ENST00000590830 EHD2Q9NZN4 543 aa23.69■■□□□ 1.38
MBD3-208ENST00000590830 DENND4CQ5VZ89 1909 aa23.69■■□□□ 1.38
MBD3-208ENST00000590830 TRAV19A0A0A6YYK7 116 aa23.68■■□□□ 1.38
MBD3-208ENST00000590830 FAM170BA6NMN3 283 aa23.68■■□□□ 1.38
MBD3-208ENST00000590830 HHLA1C9JL84 531 aa23.68■■□□□ 1.38
MBD3-208ENST00000590830 HDCP19113 662 aa23.68■■□□□ 1.38
MBD3-208ENST00000590830 RFX1P22670 979 aa23.68■■□□□ 1.38
MBD3-208ENST00000590830 SLC5A3P53794 718 aa23.68■■□□□ 1.38
MBD3-208ENST00000590830 ZXDBP98169 803 aa23.68■■□□□ 1.38
MBD3-208ENST00000590830 TNK2Q07912 1038 aa23.68■■□□□ 1.38
MBD3-208ENST00000590830 IFRD2Q12894 506 aaPredicted RBP23.68■■□□□ 1.38
MBD3-208ENST00000590830 FZD5Q13467 585 aa23.68■■□□□ 1.38
MBD3-208ENST00000590830 ZNF268Q14587 947 aaPredicted RBP23.68■■□□□ 1.38
MBD3-208ENST00000590830 DPCR1Q3MIW9 517 aa23.68■■□□□ 1.38
MBD3-208ENST00000590830 ARHGAP29Q52LW3 1261 aa23.68■■□□□ 1.38
MBD3-208ENST00000590830 PPP1R26Q5T8A7 1209 aaPredicted RBP23.68■■□□□ 1.38
MBD3-208ENST00000590830 CCDC105Q8IYK2 499 aa23.68■■□□□ 1.38
MBD3-208ENST00000590830 UBR7Q8N806 425 aa23.68■■□□□ 1.38
MBD3-208ENST00000590830 DTWD2Q8NBA8 298 aa23.68■■□□□ 1.38
MBD3-208ENST00000590830 TTC8Q8TAM2 541 aa23.68■■□□□ 1.38
MBD3-208ENST00000590830 TMEM176AQ96HP8 235 aa23.68■■□□□ 1.38
MBD3-208ENST00000590830 HEXIM2Q96MH2 286 aaKnown RBP23.68■■□□□ 1.38
MBD3-208ENST00000590830 RNF38Q9H0F5 515 aa23.68■■□□□ 1.38
MBD3-208ENST00000590830 LTB4R2Q9NPC1 389 aa23.68■■□□□ 1.38
MBD3-208ENST00000590830 GKN1Q9NS71 199 aa23.68■■□□□ 1.38
MBD3-208ENST00000590830 CHORDC1Q9UHD1 332 aaPredicted RBP23.68■■□□□ 1.38
MBD3-208ENST00000590830 OBSL1O75147 1896 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms