RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 TCF15Q12870 199 aa19.36■□□□□ 0.69
DDX39A-212ENST00000590260 MLF2Q15773 248 aaPredicted RBP19.36■□□□□ 0.69
DDX39A-212ENST00000590260 DPCR1Q3MIW9 517 aa19.36■□□□□ 0.69
DDX39A-212ENST00000590260 CCDC40Q4G0X9 1142 aa19.36■□□□□ 0.69
DDX39A-212ENST00000590260 PHLDB3Q6NSJ2 640 aa19.36■□□□□ 0.69
DDX39A-212ENST00000590260 DEPDC1BQ8WUY9 529 aa19.36■□□□□ 0.69
DDX39A-212ENST00000590260 ZFYVE19Q96K21 471 aa19.36■□□□□ 0.69
DDX39A-212ENST00000590260 CEP295NLQ96MC4 621 aa19.36■□□□□ 0.69
DDX39A-212ENST00000590260 FOXQ1Q9C009 403 aa19.36■□□□□ 0.69
DDX39A-212ENST00000590260 CSNK1G1Q9HCP0 422 aa19.36■□□□□ 0.69
DDX39A-212ENST00000590260 KRT82Q9NSB4 513 aa19.36■□□□□ 0.69
DDX39A-212ENST00000590260 IL37Q9NZH6 218 aa19.36■□□□□ 0.69
DDX39A-212ENST00000590260 DLGAP2Q9P1A6 1054 aa19.36■□□□□ 0.69
DDX39A-212ENST00000590260 MTF2Q9Y483 593 aaPredicted RBP19.36■□□□□ 0.69
DDX39A-212ENST00000590260 ZDBF2Q9HCK1 2354 aa19.35■□□□□ 0.69
DDX39A-212ENST00000590260 HHLA1C9JL84 531 aa19.35■□□□□ 0.69
DDX39A-212ENST00000590260 CD72P21854 359 aa19.35■□□□□ 0.69
DDX39A-212ENST00000590260 PGFP49763 221 aa19.35■□□□□ 0.69
DDX39A-212ENST00000590260 RAD23BP54727 409 aa19.35■□□□□ 0.69
DDX39A-212ENST00000590260 GPRIN1Q7Z2K8 1008 aa19.35■□□□□ 0.69
DDX39A-212ENST00000590260 ZNF687Q8N1G0 1237 aa19.35■□□□□ 0.69
DDX39A-212ENST00000590260 SLC4A11Q8NBS3 891 aa19.35■□□□□ 0.69
DDX39A-212ENST00000590260 SCAMP5Q8TAC9 235 aa19.35■□□□□ 0.69
DDX39A-212ENST00000590260 DNASE1L2Q92874 299 aa19.35■□□□□ 0.69
DDX39A-212ENST00000590260 FAXDC2Q96IV6 333 aa19.35■□□□□ 0.69
DDX39A-212ENST00000590260 NT5C1AQ9BXI3 368 aa19.35■□□□□ 0.69
DDX39A-212ENST00000590260 NUP62CLQ9H1M0 184 aa19.35■□□□□ 0.69
DDX39A-212ENST00000590260 MFSD1Q9H3U5 465 aa19.35■□□□□ 0.69
DDX39A-212ENST00000590260 CISHQ9NSE2 258 aa19.35■□□□□ 0.69
DDX39A-212ENST00000590260 OBP2AQ9NY56 170 aa19.35■□□□□ 0.69
DDX39A-212ENST00000590260 UXTQ9UBK9 157 aaPredicted RBP19.35■□□□□ 0.69
DDX39A-212ENST00000590260 HCN4Q9Y3Q4 1203 aa19.35■□□□□ 0.69
DDX39A-212ENST00000590260 AP1G2O75843 785 aa19.34■□□□□ 0.69
DDX39A-212ENST00000590260 DDX6P26196 483 aaKnown RBP eCLIP19.34■□□□□ 0.69
DDX39A-212ENST00000590260 ANXA13P27216 316 aa19.34■□□□□ 0.69
DDX39A-212ENST00000590260 ADORA2BP29275 332 aa19.34■□□□□ 0.69
DDX39A-212ENST00000590260 LRMPQ12912 555 aa19.34■□□□□ 0.69
DDX39A-212ENST00000590260 FZD5Q13467 585 aa19.34■□□□□ 0.69
DDX39A-212ENST00000590260 CUL2Q13617 745 aa19.34■□□□□ 0.69
DDX39A-212ENST00000590260 ZNF394Q53GI3 561 aa19.34■□□□□ 0.69
DDX39A-212ENST00000590260 CLEC20AQ6ZU45 233 aa19.34■□□□□ 0.69
DDX39A-212ENST00000590260 MRPS31Q92665 395 aaKnown RBP19.34■□□□□ 0.69
DDX39A-212ENST00000590260 KAT5Q92993 513 aa19.34■□□□□ 0.69
DDX39A-212ENST00000590260 E2F7Q96AV8 911 aa19.34■□□□□ 0.69
DDX39A-212ENST00000590260 SMARCD1Q96GM5 515 aa19.34■□□□□ 0.69
DDX39A-212ENST00000590260 GCNAQ96QF7 691 aa19.34■□□□□ 0.69
DDX39A-212ENST00000590260 HNRNPABQ99729 332 aaKnown RBP19.34■□□□□ 0.69
DDX39A-212ENST00000590260 MED10Q9BTT4 135 aa19.34■□□□□ 0.69
DDX39A-212ENST00000590260 BRD9Q9H8M2 597 aa19.34■□□□□ 0.69
DDX39A-212ENST00000590260 TRPV5Q9NQA5 729 aa19.34■□□□□ 0.69
DDX39A-212ENST00000590260 ARIH1Q9Y4X5 557 aaPredicted RBP19.34■□□□□ 0.69
DDX39A-212ENST00000590260 FAM92AA1XBS5 289 aa19.33■□□□□ 0.68
DDX39A-212ENST00000590260 ZNF840PA6NDX5 716 aa19.33■□□□□ 0.68
DDX39A-212ENST00000590260 SOBPA7XYQ1 873 aa19.33■□□□□ 0.68
DDX39A-212ENST00000590260 CHADO15335 359 aa19.33■□□□□ 0.68
DDX39A-212ENST00000590260 SLC5A3P53794 718 aa19.33■□□□□ 0.68
DDX39A-212ENST00000590260 PFKPQ01813 784 aa19.33■□□□□ 0.68
DDX39A-212ENST00000590260 PRKCQQ04759 706 aa19.33■□□□□ 0.68
DDX39A-212ENST00000590260 KCNH2Q12809 1159 aa19.33■□□□□ 0.68
DDX39A-212ENST00000590260 TAF10Q12962 218 aa19.33■□□□□ 0.68
DDX39A-212ENST00000590260 WDR44Q5JSH3 913 aa19.33■□□□□ 0.68
DDX39A-212ENST00000590260 PPP1R26Q5T8A7 1209 aaPredicted RBP19.33■□□□□ 0.68
DDX39A-212ENST00000590260 CCDC105Q8IYK2 499 aa19.33■□□□□ 0.68
DDX39A-212ENST00000590260 NUP93Q8N1F7 819 aa19.33■□□□□ 0.68
DDX39A-212ENST00000590260 ARL14EPQ8N8R7 260 aaPredicted RBP19.33■□□□□ 0.68
DDX39A-212ENST00000590260 MLKLQ8NB16 471 aa19.33■□□□□ 0.68
DDX39A-212ENST00000590260 CYFIP2Q96F07 1278 aa19.33■□□□□ 0.68
DDX39A-212ENST00000590260 RNF38Q9H0F5 515 aa19.33■□□□□ 0.68
DDX39A-212ENST00000590260 TRPC7Q9HCX4 862 aa19.33■□□□□ 0.68
DDX39A-212ENST00000590260 DMAP1Q9NPF5 467 aaPredicted RBP19.33■□□□□ 0.68
DDX39A-212ENST00000590260 KANSL1LA0AUZ9 987 aa19.32■□□□□ 0.68
DDX39A-212ENST00000590260 ZNF263O14978 683 aa19.32■□□□□ 0.68
DDX39A-212ENST00000590260 OLFM2O95897 454 aa19.32■□□□□ 0.68
DDX39A-212ENST00000590260 DCNP07585 359 aaKnown RBP19.32■□□□□ 0.68
DDX39A-212ENST00000590260 ACO1P21399 889 aaKnown RBP19.32■□□□□ 0.68
DDX39A-212ENST00000590260 TARSP26639 723 aaKnown RBP19.32■□□□□ 0.68
DDX39A-212ENST00000590260 MAP3K7CLP57077 242 aa19.32■□□□□ 0.68
DDX39A-212ENST00000590260 TNK2Q07912 1038 aa19.32■□□□□ 0.68
DDX39A-212ENST00000590260 IFRD2Q12894 506 aaPredicted RBP19.32■□□□□ 0.68
DDX39A-212ENST00000590260 RBM43Q6ZSC3 357 aaKnown RBP19.32■□□□□ 0.68
DDX39A-212ENST00000590260 TPRG1Q6ZUI0 275 aa19.32■□□□□ 0.68
DDX39A-212ENST00000590260 ARHGEF19Q8IW93 802 aa19.32■□□□□ 0.68
DDX39A-212ENST00000590260 CELF5Q8N6W0 485 aaKnown RBP19.32■□□□□ 0.68
DDX39A-212ENST00000590260 CCDC150Q8NCX0 1101 aa19.32■□□□□ 0.68
DDX39A-212ENST00000590260 PJA1Q8NG27 643 aa19.32■□□□□ 0.68
DDX39A-212ENST00000590260 BPIFB1Q8TDL5 484 aa19.32■□□□□ 0.68
DDX39A-212ENST00000590260 IRF7Q92985 503 aa19.32■□□□□ 0.68
DDX39A-212ENST00000590260 CHFRQ96EP1 664 aa19.32■□□□□ 0.68
DDX39A-212ENST00000590260 CNOT6LQ96LI5 555 aaKnown RBP19.32■□□□□ 0.68
DDX39A-212ENST00000590260 TDP1Q9NUW8 608 aa19.32■□□□□ 0.68
DDX39A-212ENST00000590260 MYO16Q9Y6X6 1858 aa19.31■□□□□ 0.68
DDX39A-212ENST00000590260 OTOL1A6NHN0 477 aaPredicted RBP19.31■□□□□ 0.68
DDX39A-212ENST00000590260 OAS1P00973 400 aaKnown RBP19.31■□□□□ 0.68
DDX39A-212ENST00000590260 SOX9P48436 509 aa19.31■□□□□ 0.68
DDX39A-212ENST00000590260 USP4Q13107 963 aa19.31■□□□□ 0.68
DDX39A-212ENST00000590260 ZNF268Q14587 947 aaPredicted RBP19.31■□□□□ 0.68
DDX39A-212ENST00000590260 ZNF77Q15935 545 aa19.31■□□□□ 0.68
DDX39A-212ENST00000590260 TMEM176AQ96HP8 235 aa19.31■□□□□ 0.68
DDX39A-212ENST00000590260 GBP4Q96PP9 640 aa19.31■□□□□ 0.68
DDX39A-212ENST00000590260 FAM83CQ9BQN1 747 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms