RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 NIF3L1Q9GZT8 377 aa12.84□□□□□ -0.35
TPM4-212ENST00000590180 METTL14Q9HCE5 456 aaKnown RBP12.84□□□□□ -0.35
TPM4-212ENST00000590180 TRPV5Q9NQA5 729 aa12.84□□□□□ -0.35
TPM4-212ENST00000590180 GKN1Q9NS71 199 aa12.84□□□□□ -0.35
TPM4-212ENST00000590180 TDP1Q9NUW8 608 aa12.84□□□□□ -0.35
TPM4-212ENST00000590180 CTNND2Q9UQB3 1225 aa12.84□□□□□ -0.35
TPM4-212ENST00000590180 NCANO14594 1321 aa12.84□□□□□ -0.35
TPM4-212ENST00000590180 TRAV19A0A0A6YYK7 116 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 BICDL2A1A5D9 508 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 NCAM2O15394 837 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 AP1G2O75843 785 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 CKMP06732 381 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 USP17L7P0C7H9 530 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 YWHAQP27348 245 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 MCCD1P59942 119 aaPredicted RBP12.83□□□□□ -0.36
TPM4-212ENST00000590180 FCHO2Q0JRZ9 810 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 TAF10Q12962 218 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 PAQR9Q6ZVX9 377 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 FRMD5Q7Z6J6 570 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 FAM35AQ86V20 835 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 ZC3H3Q8IXZ2 948 aaKnown RBP12.83□□□□□ -0.36
TPM4-212ENST00000590180 CCDC105Q8IYK2 499 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 NUP93Q8N1F7 819 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 ARL14EPQ8N8R7 260 aaPredicted RBP12.83□□□□□ -0.36
TPM4-212ENST00000590180 C12orf29Q8N999 325 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 PJA1Q8NG27 643 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 SLC2A14Q8TDB8 520 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 FAM3CQ92520 227 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 USP13Q92995 863 aaPredicted RBP12.83□□□□□ -0.36
TPM4-212ENST00000590180 TATDN2Q93075 761 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 HEXIM2Q96MH2 286 aaKnown RBP12.83□□□□□ -0.36
TPM4-212ENST00000590180 DUSP9Q99956 384 aaKnown RBP12.83□□□□□ -0.36
TPM4-212ENST00000590180 DDX23Q9BUQ8 820 aaKnown RBP12.83□□□□□ -0.36
TPM4-212ENST00000590180 BCO2Q9BYV7 579 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 LTB4R2Q9NPC1 389 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 FAM49BQ9NUQ9 324 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 FAM86C1Q9NVL1 165 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 KIAA1468Q9P260 1216 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 HMGXB4Q9UGU5 601 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 NDRG2Q9UN36 371 aaKnown RBP12.83□□□□□ -0.36
TPM4-212ENST00000590180 CCL26Q9Y258 94 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 PIAS3Q9Y6X2 628 aa12.83□□□□□ -0.36
TPM4-212ENST00000590180 RTN3O95197 1032 aaPredicted RBP12.82□□□□□ -0.36
TPM4-212ENST00000590180 CCDC130P13994 396 aa12.82□□□□□ -0.36
TPM4-212ENST00000590180 ADORA2BP29275 332 aa12.82□□□□□ -0.36
TPM4-212ENST00000590180 PPP3CCP48454 512 aa12.82□□□□□ -0.36
TPM4-212ENST00000590180 PLCB2Q00722 1185 aa12.82□□□□□ -0.36
TPM4-212ENST00000590180 LRMPQ12912 555 aa12.82□□□□□ -0.36
TPM4-212ENST00000590180 PAK1Q13153 545 aa12.82□□□□□ -0.36
TPM4-212ENST00000590180 CBWD6Q4V339 395 aa12.82□□□□□ -0.36
TPM4-212ENST00000590180 ZNF394Q53GI3 561 aa12.82□□□□□ -0.36
TPM4-212ENST00000590180 CBWD3Q5JTY5 395 aa12.82□□□□□ -0.36
TPM4-212ENST00000590180 CBWD5Q5RIA9 395 aa12.82□□□□□ -0.36
TPM4-212ENST00000590180 TTI2Q6NXR4 508 aa12.82□□□□□ -0.36
TPM4-212ENST00000590180 CREBRFQ8IUR6 639 aa12.82□□□□□ -0.36
TPM4-212ENST00000590180 FUKQ8N0W3 1084 aa12.82□□□□□ -0.36
TPM4-212ENST00000590180 CYFIP2Q96F07 1278 aa12.82□□□□□ -0.36
TPM4-212ENST00000590180 SMARCD1Q96GM5 515 aa12.82□□□□□ -0.36
TPM4-212ENST00000590180 SLITRK1Q96PX8 696 aa12.82□□□□□ -0.36
TPM4-212ENST00000590180 TWNKQ96RR1 684 aa12.82□□□□□ -0.36
TPM4-212ENST00000590180 SLC22A12Q96S37 553 aa12.82□□□□□ -0.36
TPM4-212ENST00000590180 SRRTQ9BXP5 876 aaKnown RBP12.82□□□□□ -0.36
TPM4-212ENST00000590180 OSBPL6Q9BZF3 934 aa12.82□□□□□ -0.36
TPM4-212ENST00000590180 DMAP1Q9NPF5 467 aaPredicted RBP12.82□□□□□ -0.36
TPM4-212ENST00000590180 TMEM30AQ9NV96 361 aa12.82□□□□□ -0.36
TPM4-212ENST00000590180 GTSE1Q9NYZ3 720 aa12.82□□□□□ -0.36
TPM4-212ENST00000590180 CHORDC1Q9UHD1 332 aaPredicted RBP12.82□□□□□ -0.36
TPM4-212ENST00000590180 PIEZO1Q92508 2521 aa12.82□□□□□ -0.36
TPM4-212ENST00000590180 C2orf78A6NCI8 922 aa12.81□□□□□ -0.36
TPM4-212ENST00000590180 ZNF840PA6NDX5 716 aa12.81□□□□□ -0.36
TPM4-212ENST00000590180 CILPO75339 1184 aa12.81□□□□□ -0.36
TPM4-212ENST00000590180 TADA3O75528 432 aa12.81□□□□□ -0.36
TPM4-212ENST00000590180 GLULP15104 373 aa12.81□□□□□ -0.36
TPM4-212ENST00000590180 TARSP26639 723 aaKnown RBP12.81□□□□□ -0.36
TPM4-212ENST00000590180 SOX9P48436 509 aa12.81□□□□□ -0.36
TPM4-212ENST00000590180 PDE6CP51160 858 aa12.81□□□□□ -0.36
TPM4-212ENST00000590180 MAP3K7CLP57077 242 aa12.81□□□□□ -0.36
TPM4-212ENST00000590180 TNK2Q07912 1038 aa12.81□□□□□ -0.36
TPM4-212ENST00000590180 INCA1Q0VD86 236 aa12.81□□□□□ -0.36
TPM4-212ENST00000590180 ANGPT1Q15389 498 aa12.81□□□□□ -0.36
TPM4-212ENST00000590180 ALYREFQ86V81 257 aaKnown RBP12.81□□□□□ -0.36
TPM4-212ENST00000590180 TRIML1Q8N9V2 468 aa12.81□□□□□ -0.36
TPM4-212ENST00000590180 SCAMP5Q8TAC9 235 aa12.81□□□□□ -0.36
TPM4-212ENST00000590180 FBXO32Q969P5 355 aa12.81□□□□□ -0.36
TPM4-212ENST00000590180 SLC35C1Q96A29 364 aa12.81□□□□□ -0.36
TPM4-212ENST00000590180 HNRNPABQ99729 332 aaKnown RBP12.81□□□□□ -0.36
TPM4-212ENST00000590180 SMOQ99835 787 aa12.81□□□□□ -0.36
TPM4-212ENST00000590180 TTLL2Q9BWV7 592 aa12.81□□□□□ -0.36
TPM4-212ENST00000590180 C8orf33Q9H7E9 229 aaPredicted RBP12.81□□□□□ -0.36
TPM4-212ENST00000590180 KIF9Q9HAQ2 790 aa12.81□□□□□ -0.36
TPM4-212ENST00000590180 LMAN1LQ9HAT1 526 aa12.81□□□□□ -0.36
TPM4-212ENST00000590180 KRT82Q9NSB4 513 aa12.81□□□□□ -0.36
TPM4-212ENST00000590180 SPATA6Q9NWH7 488 aaPredicted RBP12.81□□□□□ -0.36
TPM4-212ENST00000590180 GCNT4Q9P109 453 aa12.81□□□□□ -0.36
TPM4-212ENST00000590180 CACNA1IQ9P0X4 2223 aa12.8□□□□□ -0.36
TPM4-212ENST00000590180 ARNTLO00327 626 aa12.8□□□□□ -0.36
TPM4-212ENST00000590180 BEST1O76090 585 aa12.8□□□□□ -0.36
TPM4-212ENST00000590180 FGFR1OPO95684 399 aaKnown RBP12.8□□□□□ -0.36
TPM4-212ENST00000590180 GNA14O95837 355 aa12.8□□□□□ -0.36
TPM4-212ENST00000590180 FAM200BP0CF97 657 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms