RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 CCDC13Q8IYE1 715 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 THNSL1Q8IYQ7 743 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 UBR7Q8N806 425 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 FNIP1Q8TF40 1166 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 GRAMD1AQ96CP6 724 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 SGSM3Q96HU1 749 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 DMRTB1Q96MA1 342 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 GPR20Q99678 358 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 TGIF2Q9GZN2 237 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 ADAM7Q9H2U9 754 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 MROH8Q9H579 483 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 PIF1Q9H611 641 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 CCSER2Q9H7U1 834 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 AAASQ9NRG9 546 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 PRMT7Q9NVM4 692 aaPredicted RBP7.78□□□□□ -1.16
ZNF540-206ENST00000589117 LGALS13Q9UHV8 139 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 R3HDM2Q9Y2K5 976 aaKnown RBP7.78□□□□□ -1.16
ZNF540-206ENST00000589117 RLFQ13129 1914 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 A0A0G2JLL6 359 aaPredicted RBP7.78□□□□□ -1.16
ZNF540-206ENST00000589117 EXOC1LA0A1B0GW35 172 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 ASB14A6NK59 587 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 SGK1O00141 431 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 DNALI1O14645 258 aaPredicted RBP7.78□□□□□ -1.16
ZNF540-206ENST00000589117 MAGEB2O15479 319 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 GSTA1P08263 222 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 WEE2P0C1S8 567 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 ATP2A2P16615 1042 aaKnown RBP7.78□□□□□ -1.16
ZNF540-206ENST00000589117 FSHRP23945 695 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 BRD2P25440 801 aaKnown RBP7.78□□□□□ -1.16
ZNF540-206ENST00000589117 PSMA2P25787 234 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 KLRC2P26717 231 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 GBP2P32456 591 aaPredicted RBP7.78□□□□□ -1.16
ZNF540-206ENST00000589117 CHKAP35790 457 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 TNFSF9P41273 254 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 IFNAR2P48551 515 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 VCPP55072 806 aaKnown RBP7.78□□□□□ -1.16
ZNF540-206ENST00000589117 SNX16P57768 344 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 ZNF268Q14587 947 aaPredicted RBP7.78□□□□□ -1.16
ZNF540-206ENST00000589117 ZNF484Q5JVG2 852 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 EFCAB12Q6NXP0 572 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 THSD4Q6ZMP0 1018 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 EEPD1Q7L9B9 569 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 ANKS1BQ7Z6G8 1248 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 PRRT2Q7Z6L0 340 aaPredicted RBP7.78□□□□□ -1.16
ZNF540-206ENST00000589117 ANKRD13AQ8IZ07 590 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 ALLCQ8N6M5 410 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 NKD2Q969F2 451 aaPredicted RBP7.78□□□□□ -1.16
ZNF540-206ENST00000589117 NLRP4Q96MN2 994 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 MMP19Q99542 508 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 ELAC2Q9BQ52 826 aaKnown RBP7.78□□□□□ -1.16
ZNF540-206ENST00000589117 NFKBIZQ9BYH8 718 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 FZD8Q9H461 694 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 CYP3A43Q9HB55 503 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 ADARB2Q9NS39 739 aaKnown RBP7.78□□□□□ -1.16
ZNF540-206ENST00000589117 ERAP1Q9NZ08 941 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 NINJ2Q9NZG7 142 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 NXF1Q9UBU9 619 aaKnown RBP7.78□□□□□ -1.16
ZNF540-206ENST00000589117 SHOC2Q9UQ13 582 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 TNFSF13BQ9Y275 285 aa7.78□□□□□ -1.16
ZNF540-206ENST00000589117 WDR81Q562E7 1941 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 RASA4BC9J798 803 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 F8VP50 259 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 TP73O15350 636 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 RASA4O43374 803 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 FAM189A1O60320 539 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 TXNP10599 105 aaKnown RBP7.77□□□□□ -1.17
ZNF540-206ENST00000589117 MNAT1P51948 309 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 PSMC1P62191 440 aaKnown RBP7.77□□□□□ -1.17
ZNF540-206ENST00000589117 PPARDQ03181 441 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 FSTL1Q12841 308 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 GPS1Q13098 491 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 WDR72Q3MJ13 1102 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 HSDL1Q3SXM5 330 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 ANKRD20A8PQ5CZ79 823 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 LLGL2Q6P1M3 1020 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 MFSD7Q6UXD7 560 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 APBB1IPQ7Z5R6 666 aaPredicted RBP7.77□□□□□ -1.17
ZNF540-206ENST00000589117 LRRC34Q8IZ02 419 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 RSAD2Q8WXG1 361 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 CCT6BQ92526 530 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 FAM84AQ96KN4 292 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 MAK16Q9BXY0 300 aaKnown RBP7.77□□□□□ -1.17
ZNF540-206ENST00000589117 PHACTR1Q9C0D0 580 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 ASCC2Q9H1I8 757 aaPredicted RBP7.77□□□□□ -1.17
ZNF540-206ENST00000589117 ASB7Q9H672 318 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 PCDH9Q9HC56 1237 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 SAYSD1Q9NPB0 183 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 DNPEPQ9ULA0 475 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 KIAA1257Q9ULG3 409 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 NAALADL1Q9UQQ1 740 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 USP15Q9Y4E8 981 aaPredicted RBP7.77□□□□□ -1.17
ZNF540-206ENST00000589117 hCG_1818297A0A087WSY0 165 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 PI4K2BG5E9Z4 385 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 O00370 1275 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 KRT10P13645 584 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 PROZP22891 400 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 HNRNPH1P31943 449 aaKnown RBP7.77□□□□□ -1.17
ZNF540-206ENST00000589117 CDKN2BP42772 138 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 HIRAP54198 1017 aaPredicted RBP7.77□□□□□ -1.17
ZNF540-206ENST00000589117 CCDC38Q502W7 563 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms