RNA–Protein interactions for RNA: ENST00000588458.1

ABCA8-210, Transcript of ATP binding cassette subfamily A member 8, human

TSL 2

Gene ABCA8, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA8-210	ENST00000588458	TRPC3	Q13507	836 aa		13.73	□□□□□ -0.21
ABCA8-210	ENST00000588458	E2F4	Q16254	413 aa		13.73	□□□□□ -0.21
ABCA8-210	ENST00000588458	SNRNP35	Q16560	246 aa	Known RBP	13.73	□□□□□ -0.21
ABCA8-210	ENST00000588458	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.73	□□□□□ -0.21
ABCA8-210	ENST00000588458	MDH1B	Q5I0G3	518 aa		13.73	□□□□□ -0.21
ABCA8-210	ENST00000588458	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.73	□□□□□ -0.21
ABCA8-210	ENST00000588458	LIMS2	Q7Z4I7	341 aa		13.73	□□□□□ -0.21
ABCA8-210	ENST00000588458	MYCBPAP	Q8TBZ2	947 aa		13.73	□□□□□ -0.21
ABCA8-210	ENST00000588458	PCED1B	Q96HM7	432 aa		13.73	□□□□□ -0.21
ABCA8-210	ENST00000588458	MRPL45	Q9BRJ2	306 aa	Known RBP	13.73	□□□□□ -0.21
ABCA8-210	ENST00000588458	AGPAT3	Q9NRZ7	376 aa		13.73	□□□□□ -0.21
ABCA8-210	ENST00000588458	EHD2	Q9NZN4	543 aa		13.73	□□□□□ -0.21
ABCA8-210	ENST00000588458	ARHGAP26	Q9UNA1	814 aa		13.73	□□□□□ -0.21
ABCA8-210	ENST00000588458	NUP210	Q8TEM1	1887 aa	Predicted RBP	13.73	□□□□□ -0.21
ABCA8-210	ENST00000588458		F8VP50	259 aa		13.72	□□□□□ -0.21
ABCA8-210	ENST00000588458	LEFTY2	O00292	366 aa		13.72	□□□□□ -0.21
ABCA8-210	ENST00000588458	TRIM66	O15016	1216 aa		13.72	□□□□□ -0.21
ABCA8-210	ENST00000588458	POLR2D	O15514	142 aa	Known RBP	13.72	□□□□□ -0.21
ABCA8-210	ENST00000588458	TGFB1I1	O43294	461 aa		13.72	□□□□□ -0.21
ABCA8-210	ENST00000588458	CUTA	O60888	179 aa		13.72	□□□□□ -0.21
ABCA8-210	ENST00000588458	PHACTR2	O75167	634 aa		13.72	□□□□□ -0.21
ABCA8-210	ENST00000588458	CLSTN1	O94985	981 aa		13.72	□□□□□ -0.21
ABCA8-210	ENST00000588458	NFATC1	O95644	943 aa		13.72	□□□□□ -0.21
ABCA8-210	ENST00000588458	APBB3	O95704	486 aa		13.72	□□□□□ -0.21
ABCA8-210	ENST00000588458	ZNF806	P0C7X5	589 aa		13.72	□□□□□ -0.21
ABCA8-210	ENST00000588458	PTPN1	P18031	435 aa	Known RBP	13.72	□□□□□ -0.21
ABCA8-210	ENST00000588458	RAP1GAP	P47736	663 aa		13.72	□□□□□ -0.21
ABCA8-210	ENST00000588458	TNNC1	P63316	161 aa		13.72	□□□□□ -0.21
ABCA8-210	ENST00000588458	CYP24A1	Q07973	514 aa		13.72	□□□□□ -0.21
ABCA8-210	ENST00000588458	USP4	Q13107	963 aa		13.72	□□□□□ -0.21
ABCA8-210	ENST00000588458	DMC1	Q14565	340 aa		13.72	□□□□□ -0.21
ABCA8-210	ENST00000588458	WDR72	Q3MJ13	1102 aa		13.72	□□□□□ -0.21
ABCA8-210	ENST00000588458	TDRD10	Q5VZ19	366 aa	Known RBP	13.72	□□□□□ -0.21
ABCA8-210	ENST00000588458	SYT13	Q7L8C5	426 aa		13.72	□□□□□ -0.21
ABCA8-210	ENST00000588458	XXYLT1	Q8NBI6	393 aa		13.72	□□□□□ -0.21
ABCA8-210	ENST00000588458	C7orf25	Q9BPX7	421 aa		13.72	□□□□□ -0.21
ABCA8-210	ENST00000588458	NXF1	Q9UBU9	619 aa	Known RBP	13.72	□□□□□ -0.21
ABCA8-210	ENST00000588458	RALGAPA1	Q6GYQ0	2036 aa		13.72	□□□□□ -0.21
ABCA8-210	ENST00000588458	CNOT1	A5YKK6	2376 aa	Known RBP	13.72	□□□□□ -0.21
ABCA8-210	ENST00000588458	ZNF840P	A6NDX5	716 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	DCLK1	O15075	740 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	AKAP3	O75969	853 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	EPN2	O95208	641 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	ADRB1	P08588	477 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	CASP1	P29466	404 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	PPP3CC	P48454	512 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	DGKE	P52429	567 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	SEC13	P55735	322 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	IFRD2	Q12894	506 aa	Predicted RBP	13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	TAF10	Q12962	218 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	PSMD6	Q15008	389 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	ELF2	Q15723	593 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	PLK5	Q496M5	336 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	C2orf27A	Q580R0	203 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	SHC4	Q6S5L8	630 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	CCDC26	Q8TAB7	109 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	SCFD1	Q8WVM8	642 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	DDX1	Q92499	740 aa	Known RBP	13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	EZH1	Q92800	747 aa	Predicted RBP	13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	ACD	Q96AP0	544 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	CEP295NL	Q96MC4	621 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	CGRRF1	Q99675	332 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	RNF38	Q9H0F5	515 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	BLZF1	Q9H2G9	400 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	SMOC1	Q9H4F8	434 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	SLC39A2	Q9NP94	309 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	RXFP3	Q9NSD7	469 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	SMPD4	Q9NXE4	827 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	INVS	Q9Y283	1065 aa		13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.71	□□□□□ -0.21
ABCA8-210	ENST00000588458		A8MXQ7	604 aa		13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	CLDN5	O00501	218 aa		13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	SCAMP3	O14828	347 aa	Known RBP	13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	TACC1	O75410	805 aa		13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	RHOBTB1	O94844	696 aa		13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	YEATS4	O95619	227 aa		13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	FAM163B	P0C2L3	166 aa		13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	TCF3	P15923	654 aa		13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	PFKL	P17858	780 aa		13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	GBP1	P32455	592 aa		13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	AFM	P43652	599 aa		13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	MYL6	P60660	151 aa		13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	SNRPF	P62306	86 aa	Known RBP	13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	ZXDB	P98169	803 aa		13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	CNNM4	Q6P4Q7	775 aa		13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	UNC13D	Q70J99	1090 aa		13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	TSTD1	Q8NFU3	115 aa		13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	ZNF516	Q92618	1163 aa		13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	CHAMP1	Q96JM3	812 aa		13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	ZC3H10	Q96K80	434 aa	Known RBP	13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	C8orf48	Q96LL4	319 aa		13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	SLITRK1	Q96PX8	696 aa		13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	TTLL2	Q9BWV7	592 aa		13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	DPEP3	Q9H4B8	488 aa		13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	NME7	Q9Y5B8	376 aa		13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	PCDHGA5	Q9Y5G8	931 aa		13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	CPQ	Q9Y646	472 aa		13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	CACNA1B	Q00975	2339 aa		13.7	□□□□□ -0.22
ABCA8-210	ENST00000588458	ACACB	O00763	2458 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms