RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 FAM200BP0CF97 657 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 CCDC130P13994 396 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 YWHAQP27348 245 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 MTIF2P46199 727 aaKnown RBP10.71□□□□□ -0.69
TPM4-207ENST00000588032 CLCN5P51795 746 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 RAD23BP54727 409 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 SLC8A3P57103 927 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 CYP4F8P98187 520 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 GCNT1Q02742 428 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 ZNF394Q53GI3 561 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 STXBP5Q5T5C0 1151 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 ARHGAP17Q68EM7 881 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 VITQ6UXI7 678 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 ENOSF1Q7L5Y1 443 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 IRF2BP1Q8IU81 584 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 YAF2Q8IY57 180 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 MAB21L3Q8N8X9 362 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 C12orf29Q8N999 325 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 PDZD8Q8NEN9 1154 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 DOCK8Q8NF50 2099 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 DNASE1L2Q92874 299 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 KCNK16Q96T55 309 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 PLA2G2FQ9BZM2 168 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 UBXN6Q9BZV1 441 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 MFSD1Q9H3U5 465 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 FBXO44Q9H4M3 255 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 KIF9Q9HAQ2 790 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 PNPLA8Q9NP80 782 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 SPTBN5Q9NRC6 3674 aaKnown RBP10.71□□□□□ -0.69
TPM4-207ENST00000588032 KRT82Q9NSB4 513 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 FAM49BQ9NUQ9 324 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 THG1LQ9NWX6 298 aaKnown RBP10.71□□□□□ -0.69
TPM4-207ENST00000588032 IL37Q9NZH6 218 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 HMGXB4Q9UGU5 601 aa10.71□□□□□ -0.69
TPM4-207ENST00000588032 MYO10Q9HD67 2058 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 DOCK6Q96HP0 2047 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 NCANO14594 1321 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 TRAV19A0A0A6YYK7 116 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 TNFRSF10BO14763 440 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 ZNF263O14978 683 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 CHADO15335 359 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 PAEPP09466 180 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 USP17L7P0C7H9 530 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 GLULP15104 373 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 EEF1GP26641 437 aaKnown RBP10.7□□□□□ -0.7
TPM4-207ENST00000588032 ADORA2BP29275 332 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 VIPR2P41587 438 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 NUBP1P53384 320 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 CACNA2D1P54289 1103 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 MLLT6P55198 1093 aaPredicted RBP10.7□□□□□ -0.7
TPM4-207ENST00000588032 PLCB2Q00722 1185 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 PRKCQQ04759 706 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 FCHO2Q0JRZ9 810 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 LRMPQ12912 555 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 TAF10Q12962 218 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 ORC1Q13415 861 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 ZNF268Q14587 947 aaPredicted RBP10.7□□□□□ -0.7
TPM4-207ENST00000588032 STX1AQ16623 288 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 MAN2A1Q16706 1144 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 ARHGAP29Q52LW3 1261 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 SLC44A4Q53GD3 710 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 TXNDC8Q6A555 127 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 PHLDB3Q6NSJ2 640 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 GBP6Q6ZN66 633 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 SIX5Q8N196 739 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 PPM1KQ8N3J5 372 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 SLC4A11Q8NBS3 891 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 STKLD1Q8NE28 680 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 ST13P5Q8NFI4 369 aaPredicted RBP10.7□□□□□ -0.7
TPM4-207ENST00000588032 BPIFB1Q8TDL5 484 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 NELL2Q99435 816 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 SMOQ99835 787 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 ARID3AQ99856 593 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 DUSP16Q9BY84 665 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 KCNH6Q9H252 994 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 BRD9Q9H8M2 597 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 ARHGEF3Q9NR81 526 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 TDP1Q9NUW8 608 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 TMEM30AQ9NV96 361 aa10.7□□□□□ -0.7
TPM4-207ENST00000588032 FAM92AA1XBS5 289 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 ZNF840PA6NDX5 716 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 TADA3O75528 432 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 BEST1O76090 585 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 LETM1O95202 739 aaPredicted RBP10.69□□□□□ -0.7
TPM4-207ENST00000588032 VDRP11473 427 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 NPR3P17342 541 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 HDCP19113 662 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 GDI1P31150 447 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 SLC5A3P53794 718 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 MFAP3P55082 362 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 MAP3K7CLP57077 242 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 STARD6P59095 220 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 USP46P62068 366 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 STILQ15468 1287 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 VWA3BQ502W6 1294 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 SGO2Q562F6 1265 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 PPP1R26Q5T8A7 1209 aaPredicted RBP10.69□□□□□ -0.7
TPM4-207ENST00000588032 SNX30Q5VWJ9 437 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 ASTLQ6HA08 431 aaPredicted RBP10.69□□□□□ -0.7
TPM4-207ENST00000588032 C1orf228Q6PIY5 440 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms