RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 COQ4Q9Y3A0 265 aa15.73■□□□□ 0.11
ATG4D-207ENST00000587256 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.73■□□□□ 0.11
ATG4D-207ENST00000587256 MUC6Q6W4X9 2439 aa15.73■□□□□ 0.11
ATG4D-207ENST00000587256 TRAV19A0A0A6YYK7 116 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 FAM200BP0CF97 657 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 NPR3P17342 541 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 AOC1P19801 751 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 WEE1P30291 646 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 CLCN5P51795 746 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 YWHAEP62258 255 aaKnown RBP15.72■□□□□ 0.11
ATG4D-207ENST00000587256 PRKCQQ04759 706 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 LRMPQ12912 555 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 CUL2Q13617 745 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 DPCR1Q3MIW9 517 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 SLC44A4Q53GD3 710 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 TPRG1Q6ZUI0 275 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 PAQR9Q6ZVX9 377 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 MON1AQ86VX9 555 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 CREBRFQ8IUR6 639 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 TRIM59Q8IWR1 403 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 CELF5Q8N6W0 485 aaKnown RBP15.72■□□□□ 0.11
ATG4D-207ENST00000587256 TMEM105Q8N8V8 129 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 TTC16Q8NEE8 873 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 TATDN2Q93075 761 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 CNOT6LQ96LI5 555 aaKnown RBP15.72■□□□□ 0.11
ATG4D-207ENST00000587256 SLITRK1Q96PX8 696 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 KCNK16Q96T55 309 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 TTLL2Q9BWV7 592 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 KIF9Q9HAQ2 790 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 HEBP1Q9NRV9 189 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 OBP2AQ9NY56 170 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 TRPM5Q9NZQ8 1165 aa15.72■□□□□ 0.11
ATG4D-207ENST00000587256 SOBPA7XYQ1 873 aa15.71■□□□□ 0.11
ATG4D-207ENST00000587256 RTN3O95197 1032 aaPredicted RBP15.71■□□□□ 0.11
ATG4D-207ENST00000587256 AFPP02771 609 aaKnown RBP15.71■□□□□ 0.11
ATG4D-207ENST00000587256 TBXAS1P24557 533 aaPredicted RBP15.71■□□□□ 0.11
ATG4D-207ENST00000587256 PDE6CP51160 858 aa15.71■□□□□ 0.11
ATG4D-207ENST00000587256 SLC5A3P53794 718 aa15.71■□□□□ 0.11
ATG4D-207ENST00000587256 MARSP56192 900 aaKnown RBP15.71■□□□□ 0.11
ATG4D-207ENST00000587256 FCHO2Q0JRZ9 810 aa15.71■□□□□ 0.11
ATG4D-207ENST00000587256 IER5LQ5T953 404 aa15.71■□□□□ 0.11
ATG4D-207ENST00000587256 NUP93Q8N1F7 819 aa15.71■□□□□ 0.11
ATG4D-207ENST00000587256 GPT2Q8TD30 523 aa15.71■□□□□ 0.11
ATG4D-207ENST00000587256 BPIFB1Q8TDL5 484 aa15.71■□□□□ 0.11
ATG4D-207ENST00000587256 CSGALNACT1Q8TDX6 532 aa15.71■□□□□ 0.11
ATG4D-207ENST00000587256 WHAMMQ8TF30 809 aa15.71■□□□□ 0.11
ATG4D-207ENST00000587256 FBXO32Q969P5 355 aa15.71■□□□□ 0.11
ATG4D-207ENST00000587256 JAKMIP2Q96AA8 810 aa15.71■□□□□ 0.11
ATG4D-207ENST00000587256 NT5C1BQ96P26 610 aa15.71■□□□□ 0.11
ATG4D-207ENST00000587256 FAM124BQ9H5Z6 455 aaPredicted RBP15.71■□□□□ 0.11
ATG4D-207ENST00000587256 COL4A3Q01955 1670 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 C2orf78A6NCI8 922 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 PMM2O15305 246 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 CHADO15335 359 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 P4HA2O15460 535 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 MBD3O95983 291 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 ABL1P00519 1130 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 USP17L7P0C7H9 530 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 YWHAQP27348 245 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 MAP3K7CLP57077 242 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 KCNH2Q12809 1159 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 TAF10Q12962 218 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 UBXN2BQ14CS0 331 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 ARHGAP29Q52LW3 1261 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 PHLDB3Q6NSJ2 640 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 PPM1KQ8N3J5 372 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 PDZD8Q8NEN9 1154 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 USP13Q92995 863 aaPredicted RBP15.7■□□□□ 0.1
ATG4D-207ENST00000587256 CYFIP2Q96F07 1278 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 TMEM176AQ96HP8 235 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 HEXIM2Q96MH2 286 aaKnown RBP15.7■□□□□ 0.1
ATG4D-207ENST00000587256 HNRNPABQ99729 332 aaKnown RBP15.7■□□□□ 0.1
ATG4D-207ENST00000587256 PRRX2Q99811 253 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 SMOQ99835 787 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 FOXQ1Q9C009 403 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 KCNH6Q9H252 994 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 TDP1Q9NUW8 608 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 THG1LQ9NWX6 298 aaKnown RBP15.7■□□□□ 0.1
ATG4D-207ENST00000587256 CCL26Q9Y258 94 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 PIAS3Q9Y6X2 628 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 GREB1Q4ZG55 1949 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 DENND4CQ5VZ89 1909 aa15.7■□□□□ 0.1
ATG4D-207ENST00000587256 COL4A2P08572 1712 aa15.69■□□□□ 0.1
ATG4D-207ENST00000587256 TICRRQ7Z2Z1 1910 aa15.69■□□□□ 0.1
ATG4D-207ENST00000587256 PPP3CCP48454 512 aa15.69■□□□□ 0.1
ATG4D-207ENST00000587256 STARD6P59095 220 aa15.69■□□□□ 0.1
ATG4D-207ENST00000587256 PLCB2Q00722 1185 aa15.69■□□□□ 0.1
ATG4D-207ENST00000587256 CC2D1AQ6P1N0 951 aaPredicted RBP15.69■□□□□ 0.1
ATG4D-207ENST00000587256 CLEC20AQ6ZU45 233 aa15.69■□□□□ 0.1
ATG4D-207ENST00000587256 ARL14EPQ8N8R7 260 aaPredicted RBP15.69■□□□□ 0.1
ATG4D-207ENST00000587256 SLC4A11Q8NBS3 891 aa15.69■□□□□ 0.1
ATG4D-207ENST00000587256 ZMIZ2Q8NF64 920 aa15.69■□□□□ 0.1
ATG4D-207ENST00000587256 ZFYVE19Q96K21 471 aa15.69■□□□□ 0.1
ATG4D-207ENST00000587256 LRRC3BQ96PB8 259 aa15.69■□□□□ 0.1
ATG4D-207ENST00000587256 SLC22A12Q96S37 553 aa15.69■□□□□ 0.1
ATG4D-207ENST00000587256 KANSL1LA0AUZ9 987 aa15.68■□□□□ 0.1
ATG4D-207ENST00000587256 ZNF840PA6NDX5 716 aa15.68■□□□□ 0.1
ATG4D-207ENST00000587256 PI15O43692 258 aa15.68■□□□□ 0.1
ATG4D-207ENST00000587256 BEST1O76090 585 aa15.68■□□□□ 0.1
ATG4D-207ENST00000587256 CD19P15391 556 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms