RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 MYCBPAPQ8TBZ2 947 aa20.67■□□□□ 0.9
TRAF4-216ENST00000586813 ACDQ96AP0 544 aa20.67■□□□□ 0.9
TRAF4-216ENST00000586813 ZC3H10Q96K80 434 aaKnown RBP20.67■□□□□ 0.9
TRAF4-216ENST00000586813 TTLL2Q9BWV7 592 aa20.67■□□□□ 0.9
TRAF4-216ENST00000586813 NME7Q9Y5B8 376 aa20.67■□□□□ 0.9
TRAF4-216ENST00000586813 UBE4BO95155 1302 aa20.67■□□□□ 0.9
TRAF4-216ENST00000586813 K7ELQ4 463 aaPredicted RBP20.66■□□□□ 0.9
TRAF4-216ENST00000586813 TRIM66O15016 1216 aa20.66■□□□□ 0.9
TRAF4-216ENST00000586813 NFATC1O95644 943 aa20.66■□□□□ 0.9
TRAF4-216ENST00000586813 ZNF806P0C7X5 589 aa20.66■□□□□ 0.9
TRAF4-216ENST00000586813 TNNI1P19237 187 aa20.66■□□□□ 0.9
TRAF4-216ENST00000586813 LIMK1P53667 647 aa20.66■□□□□ 0.9
TRAF4-216ENST00000586813 ZXDBP98169 803 aa20.66■□□□□ 0.9
TRAF4-216ENST00000586813 NR1H3Q13133 447 aa20.66■□□□□ 0.9
TRAF4-216ENST00000586813 DMC1Q14565 340 aa20.66■□□□□ 0.9
TRAF4-216ENST00000586813 PSMD6Q15008 389 aa20.66■□□□□ 0.9
TRAF4-216ENST00000586813 MDH1BQ5I0G3 518 aa20.66■□□□□ 0.9
TRAF4-216ENST00000586813 RDH13Q8NBN7 331 aa20.66■□□□□ 0.9
TRAF4-216ENST00000586813 CGRRF1Q99675 332 aa20.66■□□□□ 0.9
TRAF4-216ENST00000586813 MRPL45Q9BRJ2 306 aaKnown RBP20.66■□□□□ 0.9
TRAF4-216ENST00000586813 LINC00597Q9H2U6 94 aa20.66■□□□□ 0.9
TRAF4-216ENST00000586813 SNX25Q9H3E2 840 aa20.66■□□□□ 0.9
TRAF4-216ENST00000586813 EHD2Q9NZN4 543 aa20.66■□□□□ 0.9
TRAF4-216ENST00000586813 TRPM5Q9NZQ8 1165 aa20.66■□□□□ 0.9
TRAF4-216ENST00000586813 PCDHGA5Q9Y5G8 931 aa20.66■□□□□ 0.9
TRAF4-216ENST00000586813 TPRP12270 2363 aaKnown RBP20.66■□□□□ 0.9
TRAF4-216ENST00000586813 ACACBO00763 2458 aa20.65■□□□□ 0.9
TRAF4-216ENST00000586813 NUP205Q92621 2012 aa20.65■□□□□ 0.9
TRAF4-216ENST00000586813 TACC1O75410 805 aa20.65■□□□□ 0.9
TRAF4-216ENST00000586813 APBB3O95704 486 aa20.65■□□□□ 0.9
TRAF4-216ENST00000586813 CST3P01034 146 aaPredicted RBP20.65■□□□□ 0.9
TRAF4-216ENST00000586813 CYP2J2P51589 502 aa20.65■□□□□ 0.9
TRAF4-216ENST00000586813 NOP14P78316 857 aaKnown RBP20.65■□□□□ 0.9
TRAF4-216ENST00000586813 CYP24A1Q07973 514 aa20.65■□□□□ 0.9
TRAF4-216ENST00000586813 PSMD2Q13200 908 aa20.65■□□□□ 0.9
TRAF4-216ENST00000586813 PLA2G2CQ5R387 149 aa20.65■□□□□ 0.9
TRAF4-216ENST00000586813 IL31Q6EBC2 164 aa20.65■□□□□ 0.9
TRAF4-216ENST00000586813 SHC4Q6S5L8 630 aa20.65■□□□□ 0.9
TRAF4-216ENST00000586813 IQUBQ8NA54 791 aa20.65■□□□□ 0.9
TRAF4-216ENST00000586813 DDX1Q92499 740 aaKnown RBP20.65■□□□□ 0.9
TRAF4-216ENST00000586813 CCDC127Q96BQ5 260 aa20.65■□□□□ 0.9
TRAF4-216ENST00000586813 ZNF396Q96N95 335 aaPredicted RBP20.65■□□□□ 0.9
TRAF4-216ENST00000586813 FNBP1Q96RU3 617 aa20.65■□□□□ 0.9
TRAF4-216ENST00000586813 C7orf25Q9BPX7 421 aa20.65■□□□□ 0.9
TRAF4-216ENST00000586813 TFIP11Q9UBB9 837 aaKnown RBP20.65■□□□□ 0.9
TRAF4-216ENST00000586813 LAMA1P25391 3075 aa20.64■□□□□ 0.9
TRAF4-216ENST00000586813 KMT2BQ9UMN6 2715 aaPredicted RBP20.64■□□□□ 0.9
TRAF4-216ENST00000586813 EPG5Q9HCE0 2579 aa20.64■□□□□ 0.9
TRAF4-216ENST00000586813 ZNF840PA6NDX5 716 aa20.64■□□□□ 0.89
TRAF4-216ENST00000586813 F8VP50 259 aa20.64■□□□□ 0.89
TRAF4-216ENST00000586813 LEFTY2O00292 366 aa20.64■□□□□ 0.89
TRAF4-216ENST00000586813 CUTAO60888 179 aa20.64■□□□□ 0.89
TRAF4-216ENST00000586813 YEATS4O95619 227 aa20.64■□□□□ 0.89
TRAF4-216ENST00000586813 GNL1P36915 607 aaPredicted RBP20.64■□□□□ 0.89
TRAF4-216ENST00000586813 MPLP40238 635 aa20.64■□□□□ 0.89
TRAF4-216ENST00000586813 TNNC1P63316 161 aa20.64■□□□□ 0.89
TRAF4-216ENST00000586813 EHHADHQ08426 723 aa20.64■□□□□ 0.89
TRAF4-216ENST00000586813 PLK5Q496M5 336 aa20.64■□□□□ 0.89
TRAF4-216ENST00000586813 UNC13DQ70J99 1090 aa20.64■□□□□ 0.89
TRAF4-216ENST00000586813 HS2ST1Q7LGA3 356 aa20.64■□□□□ 0.89
TRAF4-216ENST00000586813 NELFCDQ8IXH7 590 aa20.64■□□□□ 0.89
TRAF4-216ENST00000586813 XXYLT1Q8NBI6 393 aa20.64■□□□□ 0.89
TRAF4-216ENST00000586813 OR6B3Q8NGW1 331 aa20.64■□□□□ 0.89
TRAF4-216ENST00000586813 SCFD1Q8WVM8 642 aa20.64■□□□□ 0.89
TRAF4-216ENST00000586813 C8orf48Q96LL4 319 aa20.64■□□□□ 0.89
TRAF4-216ENST00000586813 MAGEF1Q9HAY2 307 aa20.64■□□□□ 0.89
TRAF4-216ENST00000586813 RXFP3Q9NSD7 469 aa20.64■□□□□ 0.89
TRAF4-216ENST00000586813 EBF1Q9UH73 591 aa20.64■□□□□ 0.89
TRAF4-216ENST00000586813 CACNA1BQ00975 2339 aa20.63■□□□□ 0.89
TRAF4-216ENST00000586813 CLIC2O15247 247 aa20.63■□□□□ 0.89
TRAF4-216ENST00000586813 OLFM2O95897 454 aa20.63■□□□□ 0.89
TRAF4-216ENST00000586813 KCNA4P22459 653 aa20.63■□□□□ 0.89
TRAF4-216ENST00000586813 OPRD1P41143 372 aa20.63■□□□□ 0.89
TRAF4-216ENST00000586813 PPP3CCP48454 512 aa20.63■□□□□ 0.89
TRAF4-216ENST00000586813 SNRPFP62306 86 aaKnown RBP20.63■□□□□ 0.89
TRAF4-216ENST00000586813 SLC7A9P82251 487 aa20.63■□□□□ 0.89
TRAF4-216ENST00000586813 WDR72Q3MJ13 1102 aa20.63■□□□□ 0.89
TRAF4-216ENST00000586813 CCDC26Q8TAB7 109 aa20.63■□□□□ 0.89
TRAF4-216ENST00000586813 ELOVL4Q9GZR5 314 aa20.63■□□□□ 0.89
TRAF4-216ENST00000586813 RNF38Q9H0F5 515 aa20.63■□□□□ 0.89
TRAF4-216ENST00000586813 GZF1Q9H116 711 aaPredicted RBP20.63■□□□□ 0.89
TRAF4-216ENST00000586813 DUSP15Q9H1R2 295 aaPredicted RBP20.63■□□□□ 0.89
TRAF4-216ENST00000586813 DPEP3Q9H4B8 488 aa20.63■□□□□ 0.89
TRAF4-216ENST00000586813 TMEM30AQ9NV96 361 aa20.63■□□□□ 0.89
TRAF4-216ENST00000586813 MYOFQ9NZM1 2061 aa20.63■□□□□ 0.89
TRAF4-216ENST00000586813 DCLK1O15075 740 aa20.62■□□□□ 0.89
TRAF4-216ENST00000586813 STAU1O95793 577 aaKnown RBP20.62■□□□□ 0.89
TRAF4-216ENST00000586813 OAS1P00973 400 aaKnown RBP20.62■□□□□ 0.89
TRAF4-216ENST00000586813 CYP17A1P05093 508 aa20.62■□□□□ 0.89
TRAF4-216ENST00000586813 FAM163BP0C2L3 166 aa20.62■□□□□ 0.89
TRAF4-216ENST00000586813 PTPN1P18031 435 aaKnown RBP20.62■□□□□ 0.89
TRAF4-216ENST00000586813 CACNA2D1P54289 1103 aa20.62■□□□□ 0.89
TRAF4-216ENST00000586813 ELF2Q15723 593 aa20.62■□□□□ 0.89
TRAF4-216ENST00000586813 GAB4Q2WGN9 574 aa20.62■□□□□ 0.89
TRAF4-216ENST00000586813 FILIP1Q7Z7B0 1213 aa20.62■□□□□ 0.89
TRAF4-216ENST00000586813 KIAA1958Q8N8K9 716 aa20.62■□□□□ 0.89
TRAF4-216ENST00000586813 USP33Q8TEY7 942 aa20.62■□□□□ 0.89
TRAF4-216ENST00000586813 ZNF518BQ9C0D4 1074 aa20.62■□□□□ 0.89
TRAF4-216ENST00000586813 SMOC1Q9H4F8 434 aa20.62■□□□□ 0.89
TRAF4-216ENST00000586813 VPS45Q9NRW7 570 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms