RNA–Protein interactions for RNA: ENST00000585942.5

CACTIN-204, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 1 (best)

Gene CACTIN, Length 2,810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-204ENST00000585942 SGSM1Q2NKQ1 1148 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 ZNF699Q32M78 642 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 ZNF276Q8N554 614 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 FAM13CQ8NE31 585 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 RFWD2Q8NHY2 731 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 CPXM1Q96SM3 734 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 TMEM134Q9H6X4 195 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 LMCD1Q9NZU5 365 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 AFG3L2Q9Y4W6 797 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 KAT6AQ92794 2004 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 TOM1L1O75674 476 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 KDELR1P24390 212 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 ALDH3A1P30838 453 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 PRKG1Q13976 671 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 TARBP2Q15633 366 aaKnown RBP19.32■□□□□ 0.68
CACTIN-204ENST00000585942 PPP1R2P3Q6NXS1 205 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 LONP2Q86WA8 852 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 TRIM50Q86XT4 487 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 PALM2Q8IXS6 379 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 NIPA2Q8N8Q9 360 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 ZFAND2BQ8WV99 257 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 HSPH1Q92598 858 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 GORASP1Q9BQQ3 440 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 XYLT2Q9H1B5 865 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 CYLDQ9NQC7 956 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 STK32BQ9NY57 414 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 ASB3Q9Y575 518 aa19.32■□□□□ 0.68
CACTIN-204ENST00000585942 KRT19P08727 400 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 PTPN7P35236 360 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 STAT5BP51692 787 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 OAZ1P54368 228 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 ARL4CP56559 192 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 PSMC1P62191 440 aaKnown RBP19.31■□□□□ 0.68
CACTIN-204ENST00000585942 BASP1P80723 227 aaKnown RBP19.31■□□□□ 0.68
CACTIN-204ENST00000585942 RAB6CQ53S08 254 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 CATSPERGQ6ZRH7 1159 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 NLRP9Q7RTR0 991 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 ARHGAP22Q7Z5H3 698 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 CCDC125Q86Z20 511 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 RNF149Q8NC42 400 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 ANKRD27Q96NW4 1050 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 RAB3IPQ96QF0 476 aaPredicted RBP19.31■□□□□ 0.68
CACTIN-204ENST00000585942 TRIM4Q9C037 500 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 RAB6CQ9H0N0 254 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 CHMP2BQ9UQN3 213 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 LRRC42Q9Y546 428 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 SPDYE16A6NNV3 312 aaPredicted RBP19.31■□□□□ 0.68
CACTIN-204ENST00000585942 ADGRD1Q6QNK2 874 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 NPNTQ6UXI9 565 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 TRIM74Q86UV6 250 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 TRIM73Q86UV7 250 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 TMEM192Q8IY95 271 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 MZB1Q8WU39 189 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 ACO2Q99798 780 aaKnown RBP19.31■□□□□ 0.68
CACTIN-204ENST00000585942 METTL5Q9NRN9 209 aaKnown RBP19.31■□□□□ 0.68
CACTIN-204ENST00000585942 GINM1Q9NU53 330 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 WDR35Q9P2L0 1181 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 KANSL3Q9P2N6 904 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 XPO7Q9UIA9 1087 aaKnown RBP19.31■□□□□ 0.68
CACTIN-204ENST00000585942 GJA3Q9Y6H8 435 aa19.31■□□□□ 0.68
CACTIN-204ENST00000585942 PIK3R2O00459 728 aa19.3■□□□□ 0.68
CACTIN-204ENST00000585942 DCTN3O75935 186 aa19.3■□□□□ 0.68
CACTIN-204ENST00000585942 FARP2O94887 1054 aaPredicted RBP19.3■□□□□ 0.68
CACTIN-204ENST00000585942 HOXC6P09630 235 aa19.3■□□□□ 0.68
CACTIN-204ENST00000585942 GNAZP19086 355 aa19.3■□□□□ 0.68
CACTIN-204ENST00000585942 ZNF280AP59817 542 aaPredicted RBP19.3■□□□□ 0.68
CACTIN-204ENST00000585942 MMRN1Q13201 1228 aa19.3■□□□□ 0.68
CACTIN-204ENST00000585942 SEPT7Q16181 437 aaKnown RBP19.3■□□□□ 0.68
CACTIN-204ENST00000585942 SH3PXD2AQ5TCZ1 1133 aa19.3■□□□□ 0.68
CACTIN-204ENST00000585942 LRRC6Q86X45 466 aa19.3■□□□□ 0.68
CACTIN-204ENST00000585942 ATP11CQ8NB49 1132 aa19.3■□□□□ 0.68
CACTIN-204ENST00000585942 DCAKDQ8WVC6 231 aa19.3■□□□□ 0.68
CACTIN-204ENST00000585942 CALN1Q9BXU9 219 aa19.3■□□□□ 0.68
CACTIN-204ENST00000585942 ZNF518BQ9C0D4 1074 aa19.3■□□□□ 0.68
CACTIN-204ENST00000585942 IGKV6D-21A0A0A0MT36 114 aa19.3■□□□□ 0.68
CACTIN-204ENST00000585942 SIGLEC16A6NMB1 481 aa19.3■□□□□ 0.68
CACTIN-204ENST00000585942 H0Y3Z8 333 aa19.3■□□□□ 0.68
CACTIN-204ENST00000585942 AVILO75366 819 aa19.3■□□□□ 0.68
CACTIN-204ENST00000585942 RAD23BP54727 409 aa19.3■□□□□ 0.68
CACTIN-204ENST00000585942 TMEM154Q6P9G4 183 aa19.3■□□□□ 0.68
CACTIN-204ENST00000585942 ZC3H18Q86VM9 953 aaKnown RBP19.3■□□□□ 0.68
CACTIN-204ENST00000585942 KCTD6Q8NC69 237 aa19.3■□□□□ 0.68
CACTIN-204ENST00000585942 CNKSR2Q8WXI2 1034 aa19.3■□□□□ 0.68
CACTIN-204ENST00000585942 MRPL4Q9BYD3 311 aaKnown RBP19.3■□□□□ 0.68
CACTIN-204ENST00000585942 ACSS3Q9H6R3 686 aa19.3■□□□□ 0.68
CACTIN-204ENST00000585942 AS3MTQ9HBK9 375 aa19.3■□□□□ 0.68
CACTIN-204ENST00000585942 HMGXB4Q9UGU5 601 aa19.3■□□□□ 0.68
CACTIN-204ENST00000585942 PCDHGC3Q9UN70 934 aa19.3■□□□□ 0.68
CACTIN-204ENST00000585942 A0A0G2JND7 137 aa19.29■□□□□ 0.68
CACTIN-204ENST00000585942 B4GALT5O43286 388 aa19.29■□□□□ 0.68
CACTIN-204ENST00000585942 CDH5P33151 784 aaPredicted RBP19.29■□□□□ 0.68
CACTIN-204ENST00000585942 TCF7P36402 384 aaPredicted RBP19.29■□□□□ 0.68
CACTIN-204ENST00000585942 GMPSP49915 693 aaPredicted RBP19.29■□□□□ 0.68
CACTIN-204ENST00000585942 RNF220Q5VTB9 566 aa19.29■□□□□ 0.68
CACTIN-204ENST00000585942 ZPBP2Q6X784 338 aa19.29■□□□□ 0.68
CACTIN-204ENST00000585942 BBS12Q6ZW61 710 aa19.29■□□□□ 0.68
CACTIN-204ENST00000585942 RFX6Q8HWS3 928 aa19.29■□□□□ 0.68
CACTIN-204ENST00000585942 KLHL23Q8NBE8 558 aa19.29■□□□□ 0.68
CACTIN-204ENST00000585942 SYNCQ9H7C4 482 aa19.29■□□□□ 0.68
CACTIN-204ENST00000585942 NRBP2Q9NSY0 501 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms