RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 PPME1Q9Y570 386 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 STYXL1Q9Y6J8 313 aa13.04□□□□□ -0.32
SMARCA4-208ENST00000585799 TULP2O00295 520 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 PMM2O15305 246 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 MOCS2O96007 188 aaPredicted RBP13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 CPP00450 1065 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 CD4P01730 458 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 PECAM1P16284 738 aaPredicted RBP13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 TNFRSF8P28908 595 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 ASPAP45381 313 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 NRLP54845 237 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 AP1B1Q10567 949 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 PTGISQ16647 500 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 ZNF792Q3KQV3 632 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 ADGRF2Q8IZF7 708 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 SLC4A11Q8NBS3 891 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 CCHCR1Q8TD31 782 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 CNOT10Q9H9A5 744 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 PIH1D1Q9NWS0 290 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 XPO7Q9UIA9 1087 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 PRG3Q9Y2Y8 225 aaPredicted RBP13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 TMEM120BA0PK00 339 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 SLC15A5A6NIM6 579 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 CLDN5O00501 218 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 APOL1O14791 398 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 OGDHQ02218 1023 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 CAV1Q03135 178 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 LDLRAD1Q5T700 205 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 TRMT10CQ7L0Y3 403 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 METTL23Q86XA0 190 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 KATNAL2Q8IYT4 538 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 CCDC197Q8NCU1 140 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 CNPY3Q9BT09 278 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 EPN3Q9H201 632 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 SIPA1L1O43166 1804 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 KPNA7A9QM74 516 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 ATICP31939 592 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 PTGIRP43119 386 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 MAP3K7CLP57077 242 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 ZC3H12AQ5D1E8 599 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 KDM7AQ6ZMT4 941 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 C15orf39Q6ZRI6 1047 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 ANKRD23Q86SG2 305 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 HERPUD2Q9BSE4 406 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 KATNAL1Q9BW62 490 aa13.03□□□□□ -0.32
SMARCA4-208ENST00000585799 MNAT1P51948 309 aa13.02□□□□□ -0.32
SMARCA4-208ENST00000585799 TTC31Q49AM3 519 aaPredicted RBP13.02□□□□□ -0.32
SMARCA4-208ENST00000585799 MDH1BQ5I0G3 518 aa13.02□□□□□ -0.32
SMARCA4-208ENST00000585799 ZDHHC14Q8IZN3 488 aa13.02□□□□□ -0.32
SMARCA4-208ENST00000585799 ABI1Q8IZP0 508 aa13.02□□□□□ -0.32
SMARCA4-208ENST00000585799 XPO6Q96QU8 1125 aaKnown RBP13.02□□□□□ -0.32
SMARCA4-208ENST00000585799 NRCAMQ92823 1304 aa13.02□□□□□ -0.32
SMARCA4-208ENST00000585799 QSER1Q2KHR3 1735 aa13.02□□□□□ -0.32
SMARCA4-208ENST00000585799 SIGLEC16A6NMB1 481 aa13.02□□□□□ -0.33
SMARCA4-208ENST00000585799 PAEPP09466 180 aa13.02□□□□□ -0.33
SMARCA4-208ENST00000585799 MLH1P40692 756 aa13.02□□□□□ -0.33
SMARCA4-208ENST00000585799 VCPP55072 806 aaKnown RBP13.02□□□□□ -0.33
SMARCA4-208ENST00000585799 SESN2P58004 480 aaPredicted RBP13.02□□□□□ -0.33
SMARCA4-208ENST00000585799 CNGA2Q16280 664 aa13.02□□□□□ -0.33
SMARCA4-208ENST00000585799 AGBL2Q5U5Z8 902 aa13.02□□□□□ -0.33
SMARCA4-208ENST00000585799 OLFML2BQ68BL8 750 aa13.02□□□□□ -0.33
SMARCA4-208ENST00000585799 C3orf62Q6ZUJ4 267 aa13.02□□□□□ -0.33
SMARCA4-208ENST00000585799 CCDC91Q7Z6B0 441 aa13.02□□□□□ -0.33
SMARCA4-208ENST00000585799 ZNF410Q86VK4 478 aa13.02□□□□□ -0.33
SMARCA4-208ENST00000585799 VSIG1Q86XK7 387 aa13.02□□□□□ -0.33
SMARCA4-208ENST00000585799 DNAAF3Q8N9W5 541 aa13.02□□□□□ -0.33
SMARCA4-208ENST00000585799 DPEP3Q9H4B8 488 aa13.02□□□□□ -0.33
SMARCA4-208ENST00000585799 LRRC19Q9H756 370 aa13.02□□□□□ -0.33
SMARCA4-208ENST00000585799 WHRNQ9P202 907 aa13.02□□□□□ -0.33
SMARCA4-208ENST00000585799 DNAJC25-GNG10A0A024R161 153 aa13.02□□□□□ -0.33
SMARCA4-208ENST00000585799 A0A087WUV0 522 aaPredicted RBP13.02□□□□□ -0.33
SMARCA4-208ENST00000585799 TCP11X1B4DZS4 312 aa13.02□□□□□ -0.33
SMARCA4-208ENST00000585799 MT-ND3P03897 115 aa13.02□□□□□ -0.33
SMARCA4-208ENST00000585799 WSCD1Q658N2 575 aa13.02□□□□□ -0.33
SMARCA4-208ENST00000585799 SLC7A14Q8TBB6 771 aa13.02□□□□□ -0.33
SMARCA4-208ENST00000585799 RSAD1Q9HA92 442 aa13.02□□□□□ -0.33
SMARCA4-208ENST00000585799 LCMT1Q9UIC8 334 aa13.02□□□□□ -0.33
SMARCA4-208ENST00000585799 ARFGEF1Q9Y6D6 1849 aa13.02□□□□□ -0.33
SMARCA4-208ENST00000585799 CILPO75339 1184 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 LRCH4O75427 683 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 SSTR1P30872 391 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 ADIGQ0VDE8 80 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 ZNF268Q14587 947 aaPredicted RBP13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 SYDE1Q6ZW31 735 aaPredicted RBP13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 C16orf70Q9BSU1 422 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 NINJ2Q9NZG7 142 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 M0QYT0 321 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 TTC4O95801 387 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 AGTP01019 485 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 SRGAP2BP0DMP2 458 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 KDELR1P24390 212 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 SNX17Q15036 470 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 SV2CQ496J9 727 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 CDCA2Q69YH5 1023 aaPredicted RBP13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 HEATR6Q6AI08 1181 aaKnown RBP13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 TTC39CQ8N584 583 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 GLIS1Q8NBF1 620 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 MYCBPAPQ8TBZ2 947 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 LRRC8CQ8TDW0 803 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 EDEM1Q92611 657 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms