RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 JAM2P57087 298 aa2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 ADCY2Q08462 1091 aa2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 BLMHQ13867 455 aa2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 JAKMIP3Q5VZ66 844 aa2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 SLFN12LQ6IEE8 588 aa2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 C4orf50Q6ZRC1 276 aa2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 RHOT1Q8IXI2 618 aa2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 COLGALT2Q8IYK4 626 aa2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 CMTR2Q8IYT2 770 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 DEFB123Q8N688 67 aa2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 MYCT1Q8N699 235 aa2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 GPATCH11Q8N954 259 aa2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 ZNF527Q8NB42 609 aa2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 PCSK9Q8NBP7 692 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 SLC35G2Q8TBE7 412 aa2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 SLC25A43Q8WUT9 341 aaPredicted RBP2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 IPCEF1Q8WWN9 437 aaPredicted RBP2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 ST8SIA2Q92186 375 aa2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 ZNF333Q96JL9 665 aa2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 ELF4Q99607 663 aaPredicted RBP2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 SLC26A6Q9BXS9 759 aa2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 KRTAP4-11Q9BYQ6 195 aa2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 WDR26Q9H7D7 661 aa2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 DUSP10Q9Y6W6 482 aa2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 RFX7Q2KHR2 1363 aa2.18□□□□□ -2.06
SMCHD1-211ENST00000584897 SPEF2Q9C093 1822 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 CCDC154A6NI56 674 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 NPIPB8E9PQR5 432 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 FOXN3O00409 490 aaPredicted RBP2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 IKBKBO14920 756 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 KPNA5O15131 536 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 ITGB1P05556 798 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 GYS1P13807 737 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 RHCEP18577 417 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 PRKAR2BP31323 418 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 STT3AP46977 705 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 EIF5P55010 431 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 RHDQ02161 417 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 GBX1Q14549 363 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 KCTD2Q14681 263 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 TNIP1Q15025 636 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 MUM1L1Q5H9M0 696 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 MFSD4BQ5TF39 518 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 EFCAB12Q6NXP0 572 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 EPM2AIP1Q7L775 607 aaPredicted RBP2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 SLC41A1Q8IVJ1 513 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 UNC5BQ8IZJ1 945 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 FAM156AQ8NDB6 213 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 PPP1R35Q8TAP8 253 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 TBC1D22AQ8WUA7 517 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 GJA10Q969M2 543 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 RGMAQ96B86 450 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 MBD6Q96DN6 1003 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 MASTLQ96GX5 879 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 DYDC2Q96IM9 177 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 POFUT1Q9H488 388 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 IFT122Q9HBG6 1241 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 ZCCHC17Q9NP64 241 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 MOCS1Q9NZB8 636 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 TESQ9UGI8 421 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 KMT2EQ8IZD2 1858 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 POM121BA6NF01 834 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 H0YIN7 160 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 GOLIM4O00461 696 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 GPR42O15529 346 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 PCCAP05165 728 aaPredicted RBP2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 LPOP22079 712 aaPredicted RBP2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 ADKP55263 362 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 ALDH6A1Q02252 535 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 CREMQ03060 361 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 TRAF1Q13077 416 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 RIN1Q13671 783 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 SF3B3Q15393 1217 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 ADCK5Q3MIX3 580 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 CCDC93Q567U6 631 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 CRB2Q5IJ48 1285 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 FAM83BQ5T0W9 1011 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 MBNL2Q5VZF2 373 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 RINLQ6ZS11 566 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 NLRP10Q86W26 655 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 TTC30AQ86WT1 665 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 SYT12Q8IV01 421 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 MPP5Q8N3R9 675 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 OR5M3Q8NGP4 307 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 ZNF496Q96IT1 587 aaPredicted RBP2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 ACO2Q99798 780 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 HTATIP2Q9BUP3 242 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 CD248Q9HCU0 757 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 ANLNQ9NQW6 1124 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 SACM1LQ9NTJ5 587 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 LMBRD1Q9NUN5 540 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 ZSCAN32Q9NX65 697 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 LRIT1Q9P2V4 623 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 TSPYL4Q9UJ04 414 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 SIK3Q9Y2K2 1263 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 UTYO14607 1347 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 A6NNZ2 444 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 DVL2O14641 736 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 SKAP2O75563 359 aaPredicted RBP2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms