RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 CPLX3Q8WVH0 158 aa16.96■□□□□ 0.31
CSNK1D-223ENST00000584472 NXPE3Q969Y0 559 aa16.96■□□□□ 0.31
CSNK1D-223ENST00000584472 SEPT5Q99719 369 aaPredicted RBP16.96■□□□□ 0.31
CSNK1D-223ENST00000584472 NT5C1AQ9BXI3 368 aa16.96■□□□□ 0.31
CSNK1D-223ENST00000584472 ELOVL4Q9GZR5 314 aa16.96■□□□□ 0.31
CSNK1D-223ENST00000584472 CRTAC1Q9NQ79 661 aa16.96■□□□□ 0.31
CSNK1D-223ENST00000584472 HCFC1R1Q9NWW0 138 aa16.96■□□□□ 0.31
CSNK1D-223ENST00000584472 IGSF9Q9P2J2 1179 aa16.96■□□□□ 0.31
CSNK1D-223ENST00000584472 MYO6Q9UM54 1294 aa16.96■□□□□ 0.31
CSNK1D-223ENST00000584472 MYBPHLA2RUH7 354 aa16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 ZNF197O14709 1029 aa16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 ATP2C2O75185 946 aa16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 MICAL2O94851 1124 aa16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 RHOP08100 348 aa16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 SP100P23497 879 aaPredicted RBP16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 SOX5P35711 763 aa16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 STAT1P42224 750 aa16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 MAGEA11P43364 429 aa16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 PSMC1P62191 440 aaKnown RBP16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 NTHL1P78549 312 aa16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 ORC1Q13415 861 aa16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 VEPH1Q14D04 833 aa16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 MGAT5BQ3V5L5 792 aa16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 ITIH5Q86UX2 942 aa16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 SPATA2LQ8IUW3 424 aaPredicted RBP16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 DRC7Q8IY82 874 aa16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 CRYBG2Q8N1P7 616 aa16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 SLC4A11Q8NBS3 891 aa16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 RBBP8NLQ8NC74 664 aaPredicted RBP16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 B3GALNT2Q8NCR0 500 aa16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 PSMG2Q969U7 264 aa16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 TMEM176AQ96HP8 235 aa16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 TNIP3Q96KP6 325 aa16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 CORO1BQ9BR76 489 aa16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 DPEP3Q9H4B8 488 aa16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 ASAH2Q9NR71 780 aa16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 EPS15L1Q9UBC2 864 aa16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 LUC7L2Q9Y383 392 aaKnown RBP16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 PTPRDP23468 1912 aa16.95■□□□□ 0.3
CSNK1D-223ENST00000584472 LRRC53A6NM62 1247 aa16.94■□□□□ 0.3
CSNK1D-223ENST00000584472 FGF19O95750 216 aa16.94■□□□□ 0.3
CSNK1D-223ENST00000584472 TPM1P09493 284 aa16.94■□□□□ 0.3
CSNK1D-223ENST00000584472 PTPN1P18031 435 aaKnown RBP16.94■□□□□ 0.3
CSNK1D-223ENST00000584472 ATF6P18850 670 aa16.94■□□□□ 0.3
CSNK1D-223ENST00000584472 USP8P40818 1118 aa16.94■□□□□ 0.3
CSNK1D-223ENST00000584472 RPL10AP62906 217 aaKnown RBP16.94■□□□□ 0.3
CSNK1D-223ENST00000584472 ZBED6P86452 979 aa16.94■□□□□ 0.3
CSNK1D-223ENST00000584472 CCDC142Q17RM4 750 aa16.94■□□□□ 0.3
CSNK1D-223ENST00000584472 CYP4A22Q5TCH4 519 aa16.94■□□□□ 0.3
CSNK1D-223ENST00000584472 VSTM1Q6UX27 236 aa16.94■□□□□ 0.3
CSNK1D-223ENST00000584472 GET4Q7L5D6 327 aaPredicted RBP16.94■□□□□ 0.3
CSNK1D-223ENST00000584472 ACOT1Q86TX2 421 aa16.94■□□□□ 0.3
CSNK1D-223ENST00000584472 ZNF397Q8NF99 534 aaPredicted RBP16.94■□□□□ 0.3
CSNK1D-223ENST00000584472 MYLPFQ96A32 169 aa16.94■□□□□ 0.3
CSNK1D-223ENST00000584472 CEP295NLQ96MC4 621 aa16.94■□□□□ 0.3
CSNK1D-223ENST00000584472 MYADMQ96S97 322 aa16.94■□□□□ 0.3
CSNK1D-223ENST00000584472 DNAI2Q9GZS0 605 aa16.94■□□□□ 0.3
CSNK1D-223ENST00000584472 CDH7Q9ULB5 785 aa16.94■□□□□ 0.3
CSNK1D-223ENST00000584472 MRPS23Q9Y3D9 190 aaKnown RBP16.94■□□□□ 0.3
CSNK1D-223ENST00000584472 CYP26A1O43174 497 aa16.93■□□□□ 0.3
CSNK1D-223ENST00000584472 SOAT2O75908 522 aa16.93■□□□□ 0.3
CSNK1D-223ENST00000584472 GFPT2O94808 682 aa16.93■□□□□ 0.3
CSNK1D-223ENST00000584472 PAEPP09466 180 aa16.93■□□□□ 0.3
CSNK1D-223ENST00000584472 LAMP2P13473 410 aa16.93■□□□□ 0.3
CSNK1D-223ENST00000584472 CYP2F1P24903 491 aa16.93■□□□□ 0.3
CSNK1D-223ENST00000584472 GBP2P32456 591 aaPredicted RBP16.93■□□□□ 0.3
CSNK1D-223ENST00000584472 CLCN1P35523 988 aa16.93■□□□□ 0.3
CSNK1D-223ENST00000584472 KRT9P35527 623 aa16.93■□□□□ 0.3
CSNK1D-223ENST00000584472 MDH1BQ5I0G3 518 aa16.93■□□□□ 0.3
CSNK1D-223ENST00000584472 PRSS36Q5K4E3 855 aa16.93■□□□□ 0.3
CSNK1D-223ENST00000584472 PDZD4Q76G19 769 aaPredicted RBP16.93■□□□□ 0.3
CSNK1D-223ENST00000584472 SPC24Q8NBT2 197 aa16.93■□□□□ 0.3
CSNK1D-223ENST00000584472 ITFG1Q8TB96 612 aa16.93■□□□□ 0.3
CSNK1D-223ENST00000584472 ANP32BQ92688 251 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-223ENST00000584472 PCED1BQ96HM7 432 aa16.93■□□□□ 0.3
CSNK1D-223ENST00000584472 NUCKS1Q9H1E3 243 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-223ENST00000584472 GDE1Q9NZC3 331 aa16.93■□□□□ 0.3
CSNK1D-223ENST00000584472 IMPACTQ9P2X3 320 aa16.93■□□□□ 0.3
CSNK1D-223ENST00000584472 MYH10P35580 1976 aa16.93■□□□□ 0.3
CSNK1D-223ENST00000584472 AKR1B15C9JRZ8 316 aaPredicted RBP16.92■□□□□ 0.3
CSNK1D-223ENST00000584472 MFAP3LO75121 409 aa16.92■□□□□ 0.3
CSNK1D-223ENST00000584472 FERP16591 822 aa16.92■□□□□ 0.3
CSNK1D-223ENST00000584472 CYP27A1Q02318 531 aa16.92■□□□□ 0.3
CSNK1D-223ENST00000584472 ARID5BQ14865 1188 aa16.92■□□□□ 0.3
CSNK1D-223ENST00000584472 SLC5A9Q2M3M2 681 aa16.92■□□□□ 0.3
CSNK1D-223ENST00000584472 SFMBT2Q5VUG0 894 aa16.92■□□□□ 0.3
CSNK1D-223ENST00000584472 E4F1Q66K89 784 aaPredicted RBP16.92■□□□□ 0.3
CSNK1D-223ENST00000584472 DNAJB7Q7Z6W7 309 aaPredicted RBP16.92■□□□□ 0.3
CSNK1D-223ENST00000584472 TMC8Q8IU68 726 aa16.92■□□□□ 0.3
CSNK1D-223ENST00000584472 CNGA4Q8IV77 575 aa16.92■□□□□ 0.3
CSNK1D-223ENST00000584472 FMNL3Q8IVF7 1028 aa16.92■□□□□ 0.3
CSNK1D-223ENST00000584472 NPAS3Q8IXF0 933 aa16.92■□□□□ 0.3
CSNK1D-223ENST00000584472 C12orf29Q8N999 325 aa16.92■□□□□ 0.3
CSNK1D-223ENST00000584472 SYN2Q92777 582 aaPredicted RBP16.92■□□□□ 0.3
CSNK1D-223ENST00000584472 FGF13Q92913 245 aa16.92■□□□□ 0.3
CSNK1D-223ENST00000584472 HEXIM2Q96MH2 286 aaKnown RBP16.92■□□□□ 0.3
CSNK1D-223ENST00000584472 LPIN3Q9BQK8 851 aa16.92■□□□□ 0.3
CSNK1D-223ENST00000584472 LRRC3Q9BY71 257 aa16.92■□□□□ 0.3
CSNK1D-223ENST00000584472 IRF2BPLQ9H1B7 796 aa16.92■□□□□ 0.3
CSNK1D-223ENST00000584472 ACP6Q9NPH0 428 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms