RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 TXNDC8Q6A555 127 aa28.84■■■□□ 2.21
SMARCD2-210ENST00000584400 FUKQ8N0W3 1084 aa28.84■■■□□ 2.21
SMARCD2-210ENST00000584400 SLC2A14Q8TDB8 520 aa28.84■■■□□ 2.21
SMARCD2-210ENST00000584400 BPIFB1Q8TDL5 484 aa28.84■■■□□ 2.21
SMARCD2-210ENST00000584400 HMGXB4Q9UGU5 601 aa28.84■■■□□ 2.21
SMARCD2-210ENST00000584400 TRAV19A0A0A6YYK7 116 aa28.83■■■□□ 2.21
SMARCD2-210ENST00000584400 PLCB2Q00722 1185 aa28.83■■■□□ 2.21
SMARCD2-210ENST00000584400 TMEM105Q8N8V8 129 aa28.83■■■□□ 2.21
SMARCD2-210ENST00000584400 CSGALNACT1Q8TDX6 532 aa28.83■■■□□ 2.21
SMARCD2-210ENST00000584400 NELL2Q99435 816 aa28.83■■■□□ 2.21
SMARCD2-210ENST00000584400 HNRNPABQ99729 332 aaKnown RBP28.83■■■□□ 2.21
SMARCD2-210ENST00000584400 TRPC7Q9HCX4 862 aa28.83■■■□□ 2.21
SMARCD2-210ENST00000584400 KRT82Q9NSB4 513 aa28.83■■■□□ 2.21
SMARCD2-210ENST00000584400 TDP1Q9NUW8 608 aa28.83■■■□□ 2.21
SMARCD2-210ENST00000584400 COMMD8Q9NX08 183 aa28.83■■■□□ 2.21
SMARCD2-210ENST00000584400 MRPS17Q9Y2R5 130 aaKnown RBP28.83■■■□□ 2.21
SMARCD2-210ENST00000584400 KANSL1LA0AUZ9 987 aa28.82■■■□□ 2.2
SMARCD2-210ENST00000584400 LRRN2O75325 713 aa28.82■■■□□ 2.2
SMARCD2-210ENST00000584400 TADA3O75528 432 aa28.82■■■□□ 2.2
SMARCD2-210ENST00000584400 AP1G2O75843 785 aa28.82■■■□□ 2.2
SMARCD2-210ENST00000584400 USP17L7P0C7H9 530 aa28.82■■■□□ 2.2
SMARCD2-210ENST00000584400 FAM200BP0CF97 657 aa28.82■■■□□ 2.2
SMARCD2-210ENST00000584400 CCDC130P13994 396 aa28.82■■■□□ 2.2
SMARCD2-210ENST00000584400 TBXAS1P24557 533 aaPredicted RBP28.82■■■□□ 2.2
SMARCD2-210ENST00000584400 ORC1Q13415 861 aa28.82■■■□□ 2.2
SMARCD2-210ENST00000584400 ZNF268Q14587 947 aaPredicted RBP28.82■■■□□ 2.2
SMARCD2-210ENST00000584400 PAQR9Q6ZVX9 377 aa28.82■■■□□ 2.2
SMARCD2-210ENST00000584400 PDZD8Q8NEN9 1154 aa28.82■■■□□ 2.2
SMARCD2-210ENST00000584400 CYFIP2Q96F07 1278 aa28.82■■■□□ 2.2
SMARCD2-210ENST00000584400 IRF2BPLQ9H1B7 796 aa28.82■■■□□ 2.2
SMARCD2-210ENST00000584400 CISHQ9NSE2 258 aa28.82■■■□□ 2.2
SMARCD2-210ENST00000584400 SIT1Q9Y3P8 196 aa28.82■■■□□ 2.2
SMARCD2-210ENST00000584400 UTP18Q9Y5J1 556 aaKnown RBP eCLIP28.82■■■□□ 2.2
SMARCD2-210ENST00000584400 MAN2B1O00754 1011 aa28.81■■■□□ 2.2
SMARCD2-210ENST00000584400 PRAMEF12O95522 483 aa28.81■■■□□ 2.2
SMARCD2-210ENST00000584400 GLULP15104 373 aa28.81■■■□□ 2.2
SMARCD2-210ENST00000584400 YWHAQP27348 245 aa28.81■■■□□ 2.2
SMARCD2-210ENST00000584400 CACNA2D1P54289 1103 aa28.81■■■□□ 2.2
SMARCD2-210ENST00000584400 CUL2Q13617 745 aa28.81■■■□□ 2.2
SMARCD2-210ENST00000584400 C1orf228Q6PIY5 440 aa28.81■■■□□ 2.2
SMARCD2-210ENST00000584400 ZNF852Q6ZMS4 543 aa28.81■■■□□ 2.2
SMARCD2-210ENST00000584400 GPIHBP1Q8IV16 184 aa28.81■■■□□ 2.2
SMARCD2-210ENST00000584400 TRIM59Q8IWR1 403 aa28.81■■■□□ 2.2
SMARCD2-210ENST00000584400 C12orf29Q8N999 325 aa28.81■■■□□ 2.2
SMARCD2-210ENST00000584400 OVCA2Q8WZ82 227 aa28.81■■■□□ 2.2
SMARCD2-210ENST00000584400 RSPRY1Q96DX4 576 aa28.81■■■□□ 2.2
SMARCD2-210ENST00000584400 MSANTD3Q96H12 275 aa28.81■■■□□ 2.2
SMARCD2-210ENST00000584400 TWNKQ96RR1 684 aa28.81■■■□□ 2.2
SMARCD2-210ENST00000584400 KCNK16Q96T55 309 aa28.81■■■□□ 2.2
SMARCD2-210ENST00000584400 DDX23Q9BUQ8 820 aaKnown RBP28.81■■■□□ 2.2
SMARCD2-210ENST00000584400 HEBP1Q9NRV9 189 aa28.81■■■□□ 2.2
SMARCD2-210ENST00000584400 FAM49BQ9NUQ9 324 aa28.81■■■□□ 2.2
SMARCD2-210ENST00000584400 CKMP06732 381 aa28.8■■■□□ 2.2
SMARCD2-210ENST00000584400 MLLT6P55198 1093 aaPredicted RBP28.8■■■□□ 2.2
SMARCD2-210ENST00000584400 USP46P62068 366 aa28.8■■■□□ 2.2
SMARCD2-210ENST00000584400 TPD52L1Q16890 204 aaPredicted RBP28.8■■■□□ 2.2
SMARCD2-210ENST00000584400 TPRG1Q6ZUI0 275 aa28.8■■■□□ 2.2
SMARCD2-210ENST00000584400 WHAMMQ8TF30 809 aa28.8■■■□□ 2.2
SMARCD2-210ENST00000584400 TATDN2Q93075 761 aa28.8■■■□□ 2.2
SMARCD2-210ENST00000584400 TMEM176AQ96HP8 235 aa28.8■■■□□ 2.2
SMARCD2-210ENST00000584400 OSBPL6Q9BZF3 934 aa28.8■■■□□ 2.2
SMARCD2-210ENST00000584400 CSNK1G1Q9HCP0 422 aa28.8■■■□□ 2.2
SMARCD2-210ENST00000584400 NCAM2O15394 837 aa28.79■■■□□ 2.2
SMARCD2-210ENST00000584400 HDCP19113 662 aa28.79■■■□□ 2.2
SMARCD2-210ENST00000584400 PTPN5P54829 565 aa28.79■■■□□ 2.2
SMARCD2-210ENST00000584400 IFRD2Q12894 506 aaPredicted RBP28.79■■■□□ 2.2
SMARCD2-210ENST00000584400 TAF10Q12962 218 aa28.79■■■□□ 2.2
SMARCD2-210ENST00000584400 ZNF394Q53GI3 561 aa28.79■■■□□ 2.2
SMARCD2-210ENST00000584400 IER5LQ5T953 404 aa28.79■■■□□ 2.2
SMARCD2-210ENST00000584400 CC2D1AQ6P1N0 951 aaPredicted RBP28.79■■■□□ 2.2
SMARCD2-210ENST00000584400 USP13Q92995 863 aaPredicted RBP28.79■■■□□ 2.2
SMARCD2-210ENST00000584400 HEXIM2Q96MH2 286 aaKnown RBP28.79■■■□□ 2.2
SMARCD2-210ENST00000584400 NT5C1BQ96P26 610 aa28.79■■■□□ 2.2
SMARCD2-210ENST00000584400 FBXO44Q9H4M3 255 aa28.79■■■□□ 2.2
SMARCD2-210ENST00000584400 TMEM30AQ9NV96 361 aa28.79■■■□□ 2.2
SMARCD2-210ENST00000584400 AFPP02771 609 aaKnown RBP28.78■■■□□ 2.2
SMARCD2-210ENST00000584400 ADORA2BP29275 332 aa28.78■■■□□ 2.2
SMARCD2-210ENST00000584400 SLC5A3P53794 718 aa28.78■■■□□ 2.2
SMARCD2-210ENST00000584400 MAP3K7CLP57077 242 aa28.78■■■□□ 2.2
SMARCD2-210ENST00000584400 KCNH2Q12809 1159 aa28.78■■■□□ 2.2
SMARCD2-210ENST00000584400 PJA1Q8NG27 643 aa28.78■■■□□ 2.2
SMARCD2-210ENST00000584400 FBXO32Q969P5 355 aa28.78■■■□□ 2.2
SMARCD2-210ENST00000584400 SMG9Q9H0W8 520 aaKnown RBP28.78■■■□□ 2.2
SMARCD2-210ENST00000584400 PNPLA8Q9NP80 782 aa28.78■■■□□ 2.2
SMARCD2-210ENST00000584400 NCANO14594 1321 aa28.77■■■□□ 2.2
SMARCD2-210ENST00000584400 ZNF840PA6NDX5 716 aa28.77■■■□□ 2.2
SMARCD2-210ENST00000584400 GALR2O43603 387 aaPredicted RBP28.77■■■□□ 2.2
SMARCD2-210ENST00000584400 PI15O43692 258 aa28.77■■■□□ 2.2
SMARCD2-210ENST00000584400 ABL1P00519 1130 aa28.77■■■□□ 2.2
SMARCD2-210ENST00000584400 CT47A1Q5JQC4 288 aaPredicted RBP28.77■■■□□ 2.2
SMARCD2-210ENST00000584400 CREBRFQ8IUR6 639 aa28.77■■■□□ 2.2
SMARCD2-210ENST00000584400 LRRC3BQ96PB8 259 aa28.77■■■□□ 2.2
SMARCD2-210ENST00000584400 SMOQ99835 787 aa28.77■■■□□ 2.2
SMARCD2-210ENST00000584400 C8orf33Q9H7E9 229 aaPredicted RBP28.77■■■□□ 2.2
SMARCD2-210ENST00000584400 ARNTLO00327 626 aa28.76■■■□□ 2.19
SMARCD2-210ENST00000584400 ERCC5P28715 1186 aaPredicted RBP28.76■■■□□ 2.19
SMARCD2-210ENST00000584400 SLC8A3P57103 927 aa28.76■■■□□ 2.19
SMARCD2-210ENST00000584400 LRMPQ12912 555 aa28.76■■■□□ 2.19
SMARCD2-210ENST00000584400 UBXN2BQ14CS0 331 aa28.76■■■□□ 2.19
SMARCD2-210ENST00000584400 ARL14EPQ8N8R7 260 aaPredicted RBP28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms