RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 TUFMP49411 452 aaKnown RBP11.97□□□□□ -0.49
CCDC47-206ENST00000584112 CASP5P51878 434 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 SMARCB1Q12824 385 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 TRIP6Q15654 476 aaKnown RBP11.97□□□□□ -0.49
CCDC47-206ENST00000584112 E2F4Q16254 413 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 TRIM61Q5EBN2 209 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 ATL3Q6DD88 541 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 CENPPQ6IPU0 288 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 PRICKLE2Q7Z3G6 844 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 SLCO6A1Q86UG4 719 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 ITIH5Q86UX2 942 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 HS6ST3Q8IZP7 471 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 IQUBQ8NA54 791 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 OR2I1PQ8NGU4 316 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 C2orf15Q8WU43 125 aaKnown RBP11.97□□□□□ -0.49
CCDC47-206ENST00000584112 SMARCD2Q92925 531 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 IRF7Q92985 503 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 E2F7Q96AV8 911 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 ASB16Q96NS5 453 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 HHIPQ96QV1 700 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 IKZF4Q9H2S9 585 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 MAGEF1Q9HAY2 307 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 KBTBD4Q9NVX7 518 aa11.97□□□□□ -0.49
CCDC47-206ENST00000584112 RBAKQ9NYW8 714 aaPredicted RBP11.97□□□□□ -0.49
CCDC47-206ENST00000584112 TFIP11Q9UBB9 837 aaKnown RBP11.97□□□□□ -0.49
CCDC47-206ENST00000584112 NCANO14594 1321 aa11.96□□□□□ -0.49
CCDC47-206ENST00000584112 KPNA7A9QM74 516 aa11.96□□□□□ -0.49
CCDC47-206ENST00000584112 PRPF6O94906 941 aaKnown RBP11.96□□□□□ -0.49
CCDC47-206ENST00000584112 F13A1P00488 732 aa11.96□□□□□ -0.49
CCDC47-206ENST00000584112 POU3F2P20265 443 aaPredicted RBP11.96□□□□□ -0.49
CCDC47-206ENST00000584112 ASIC1P78348 528 aa11.96□□□□□ -0.49
CCDC47-206ENST00000584112 TFAMQ00059 246 aaKnown RBP11.96□□□□□ -0.49
CCDC47-206ENST00000584112 LMAN2Q12907 356 aa11.96□□□□□ -0.49
CCDC47-206ENST00000584112 PON2Q15165 354 aa11.96□□□□□ -0.49
CCDC47-206ENST00000584112 FAM78AQ5JUQ0 283 aa11.96□□□□□ -0.49
CCDC47-206ENST00000584112 DGKKQ5KSL6 1271 aa11.96□□□□□ -0.49
CCDC47-206ENST00000584112 FOXD4L5Q5VV16 416 aaPredicted RBP11.96□□□□□ -0.49
CCDC47-206ENST00000584112 HIST2H2BCQ6DN03 193 aa11.96□□□□□ -0.49
CCDC47-206ENST00000584112 VITQ6UXI7 678 aa11.96□□□□□ -0.49
CCDC47-206ENST00000584112 GPD1LQ8N335 351 aa11.96□□□□□ -0.49
CCDC47-206ENST00000584112 ATAD1Q8NBU5 361 aa11.96□□□□□ -0.49
CCDC47-206ENST00000584112 OR10T2Q8NGX3 314 aa11.96□□□□□ -0.49
CCDC47-206ENST00000584112 TTC8Q8TAM2 541 aa11.96□□□□□ -0.49
CCDC47-206ENST00000584112 SPPL2BQ8TCT7 592 aa11.96□□□□□ -0.49
CCDC47-206ENST00000584112 NOC3LQ8WTT2 800 aaKnown RBP11.96□□□□□ -0.49
CCDC47-206ENST00000584112 DEPDC1BQ8WUY9 529 aa11.96□□□□□ -0.49
CCDC47-206ENST00000584112 FOXD4L4Q8WXT5 416 aaPredicted RBP11.96□□□□□ -0.49
CCDC47-206ENST00000584112 PSMG2Q969U7 264 aa11.96□□□□□ -0.49
CCDC47-206ENST00000584112 DHX58Q96C10 678 aa11.96□□□□□ -0.49
CCDC47-206ENST00000584112 SAAL1Q96ER3 474 aa11.96□□□□□ -0.49
CCDC47-206ENST00000584112 TRIM9Q9C026 710 aa11.96□□□□□ -0.49
CCDC47-206ENST00000584112 ZCWPW1Q9H0M4 648 aa11.96□□□□□ -0.49
CCDC47-206ENST00000584112 SLITRK6Q9H5Y7 841 aa11.96□□□□□ -0.49
CCDC47-206ENST00000584112 TRPV4Q9HBA0 871 aa11.96□□□□□ -0.49
CCDC47-206ENST00000584112 ITGA11Q9UKX5 1188 aa11.96□□□□□ -0.49
CCDC47-206ENST00000584112 SLC8A2Q9UPR5 921 aa11.96□□□□□ -0.49
CCDC47-206ENST00000584112 R3HCC1Q9Y3T6 440 aaKnown RBP11.96□□□□□ -0.49
CCDC47-206ENST00000584112 UBE4BO95155 1302 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 TULP1O00294 542 aaPredicted RBP11.95□□□□□ -0.5
CCDC47-206ENST00000584112 EIF3DO15371 548 aaKnown RBP eCLIP11.95□□□□□ -0.5
CCDC47-206ENST00000584112 MOSPD3O75425 235 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 ITGB3P05106 788 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 TMEM191BP0C7N4 346 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 C6P13671 934 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 CD59P13987 128 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 PSMC3P17980 439 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 POLR2BP30876 1174 aaKnown RBP11.95□□□□□ -0.5
CCDC47-206ENST00000584112 TSPY1Q01534 308 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 CCINQ13939 588 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 VEPH1Q14D04 833 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 SURF1Q15526 300 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 TEAD2Q15562 447 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 SLC39A12Q504Y0 691 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 WSCD1Q658N2 575 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 PMS2CLQ68D20 193 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 CNNM4Q6P4Q7 775 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 SHC4Q6S5L8 630 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 TMC8Q8IU68 726 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 DCP1BQ8IZD4 617 aaKnown RBP11.95□□□□□ -0.5
CCDC47-206ENST00000584112 HDDC3Q8N4P3 179 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 LRRC52Q8N7C0 313 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 SHKBP1Q8TBC3 707 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 ZSCAN18Q8TBC5 510 aaPredicted RBP11.95□□□□□ -0.5
CCDC47-206ENST00000584112 TMEM209Q96SK2 561 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 CBWD1Q9BRT8 395 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 GTPBP2Q9BX10 602 aaKnown RBP11.95□□□□□ -0.5
CCDC47-206ENST00000584112 LRRC3Q9BY71 257 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 FGFBP2Q9BYJ0 223 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 DNAJC25Q9H1X3 360 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 CRISPLD1Q9H336 500 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 PCIF1Q9H4Z3 704 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 TRPV5Q9NQA5 729 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 FAM13BQ9NYF5 915 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 EVLQ9UI08 416 aaPredicted RBP11.95□□□□□ -0.5
CCDC47-206ENST00000584112 CFAP45Q9UL16 551 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 AGAP1Q9UPQ3 857 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 SLC27A5Q9Y2P5 690 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 BOD1L1Q8NFC6 3051 aa11.95□□□□□ -0.5
CCDC47-206ENST00000584112 KNTC1P50748 2209 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 A0A1W2PRU2 124 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms