RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 TARSP26639 723 aaKnown RBP21.71■■□□□ 1.07
SS18-224ENST00000584083 USP46P62068 366 aa21.71■■□□□ 1.07
SS18-224ENST00000584083 ANGPT1Q15389 498 aa21.71■■□□□ 1.07
SS18-224ENST00000584083 FAM35AQ86V20 835 aa21.71■■□□□ 1.07
SS18-224ENST00000584083 UNC93AQ86WB7 457 aa21.71■■□□□ 1.07
SS18-224ENST00000584083 USP13Q92995 863 aaPredicted RBP21.71■■□□□ 1.07
SS18-224ENST00000584083 PHOX2BQ99453 314 aa21.71■■□□□ 1.07
SS18-224ENST00000584083 NIF3L1Q9GZT8 377 aa21.71■■□□□ 1.07
SS18-224ENST00000584083 CYP3A43Q9HB55 503 aa21.71■■□□□ 1.07
SS18-224ENST00000584083 APOBEC3GQ9HC16 384 aaKnown RBP21.71■■□□□ 1.07
SS18-224ENST00000584083 TRPM5Q9NZQ8 1165 aa21.71■■□□□ 1.07
SS18-224ENST00000584083 DLGAP2Q9P1A6 1054 aa21.71■■□□□ 1.07
SS18-224ENST00000584083 HMGXB4Q9UGU5 601 aa21.71■■□□□ 1.07
SS18-224ENST00000584083 CCL26Q9Y258 94 aa21.71■■□□□ 1.07
SS18-224ENST00000584083 CKMP06732 381 aa21.7■■□□□ 1.06
SS18-224ENST00000584083 USP17L7P0C7H9 530 aa21.7■■□□□ 1.06
SS18-224ENST00000584083 GLULP15104 373 aa21.7■■□□□ 1.06
SS18-224ENST00000584083 CD44P16070 742 aaKnown RBP21.7■■□□□ 1.06
SS18-224ENST00000584083 MCCD1P59942 119 aaPredicted RBP21.7■■□□□ 1.06
SS18-224ENST00000584083 PLCB2Q00722 1185 aa21.7■■□□□ 1.06
SS18-224ENST00000584083 IFRD2Q12894 506 aaPredicted RBP21.7■■□□□ 1.06
SS18-224ENST00000584083 ALYREFQ86V81 257 aaKnown RBP21.7■■□□□ 1.06
SS18-224ENST00000584083 ZC3H3Q8IXZ2 948 aaKnown RBP21.7■■□□□ 1.06
SS18-224ENST00000584083 CRYBG2Q8N1P7 616 aa21.7■■□□□ 1.06
SS18-224ENST00000584083 TTC16Q8NEE8 873 aa21.7■■□□□ 1.06
SS18-224ENST00000584083 TTC8Q8TAM2 541 aa21.7■■□□□ 1.06
SS18-224ENST00000584083 FAM3CQ92520 227 aa21.7■■□□□ 1.06
SS18-224ENST00000584083 SMARCD1Q96GM5 515 aa21.7■■□□□ 1.06
SS18-224ENST00000584083 CYP2S1Q96SQ9 504 aa21.7■■□□□ 1.06
SS18-224ENST00000584083 KIF9Q9HAQ2 790 aa21.7■■□□□ 1.06
SS18-224ENST00000584083 GKN1Q9NS71 199 aa21.7■■□□□ 1.06
SS18-224ENST00000584083 TMEM30AQ9NV96 361 aa21.7■■□□□ 1.06
SS18-224ENST00000584083 ARMCX3Q9UH62 379 aaPredicted RBP21.7■■□□□ 1.06
SS18-224ENST00000584083 ABL1P00519 1130 aa21.69■■□□□ 1.06
SS18-224ENST00000584083 CCDC130P13994 396 aa21.69■■□□□ 1.06
SS18-224ENST00000584083 CD58P19256 250 aa21.69■■□□□ 1.06
SS18-224ENST00000584083 MORC3Q14149 939 aa21.69■■□□□ 1.06
SS18-224ENST00000584083 FUKQ8N0W3 1084 aa21.69■■□□□ 1.06
SS18-224ENST00000584083 NUP93Q8N1F7 819 aa21.69■■□□□ 1.06
SS18-224ENST00000584083 ARL14EPQ8N8R7 260 aaPredicted RBP21.69■■□□□ 1.06
SS18-224ENST00000584083 FBXL13Q8NEE6 735 aa21.69■■□□□ 1.06
SS18-224ENST00000584083 SEMA4DQ92854 862 aa21.69■■□□□ 1.06
SS18-224ENST00000584083 SLC22A12Q96S37 553 aa21.69■■□□□ 1.06
SS18-224ENST00000584083 KCNK16Q96T55 309 aa21.69■■□□□ 1.06
SS18-224ENST00000584083 TTLL2Q9BWV7 592 aa21.69■■□□□ 1.06
SS18-224ENST00000584083 DNAI2Q9GZS0 605 aa21.69■■□□□ 1.06
SS18-224ENST00000584083 DMAP1Q9NPF5 467 aaPredicted RBP21.69■■□□□ 1.06
SS18-224ENST00000584083 FAM49BQ9NUQ9 324 aa21.69■■□□□ 1.06
SS18-224ENST00000584083 RAB20Q9NX57 234 aa21.69■■□□□ 1.06
SS18-224ENST00000584083 CACNA1IQ9P0X4 2223 aa21.68■■□□□ 1.06
SS18-224ENST00000584083 C2orf78A6NCI8 922 aa21.68■■□□□ 1.06
SS18-224ENST00000584083 SHISA7A6NL88 538 aa21.68■■□□□ 1.06
SS18-224ENST00000584083 AP1G2O75843 785 aa21.68■■□□□ 1.06
SS18-224ENST00000584083 HDCP19113 662 aa21.68■■□□□ 1.06
SS18-224ENST00000584083 BMP6P22004 513 aa21.68■■□□□ 1.06
SS18-224ENST00000584083 HOXD11P31277 338 aaPredicted RBP21.68■■□□□ 1.06
SS18-224ENST00000584083 MRE11P49959 708 aa21.68■■□□□ 1.06
SS18-224ENST00000584083 INCA1Q0VD86 236 aa21.68■■□□□ 1.06
SS18-224ENST00000584083 TAF10Q12962 218 aa21.68■■□□□ 1.06
SS18-224ENST00000584083 ZNF268Q14587 947 aaPredicted RBP21.68■■□□□ 1.06
SS18-224ENST00000584083 WDR44Q5JSH3 913 aa21.68■■□□□ 1.06
SS18-224ENST00000584083 CC2D1AQ6P1N0 951 aaPredicted RBP21.68■■□□□ 1.06
SS18-224ENST00000584083 PAQR9Q6ZVX9 377 aa21.68■■□□□ 1.06
SS18-224ENST00000584083 C12orf29Q8N999 325 aa21.68■■□□□ 1.06
SS18-224ENST00000584083 SLC2A14Q8TDB8 520 aa21.68■■□□□ 1.06
SS18-224ENST00000584083 NELFBQ8WX92 580 aa21.68■■□□□ 1.06
SS18-224ENST00000584083 SLITRK1Q96PX8 696 aa21.68■■□□□ 1.06
SS18-224ENST00000584083 NT5C1AQ9BXI3 368 aa21.68■■□□□ 1.06
SS18-224ENST00000584083 C8orf33Q9H7E9 229 aaPredicted RBP21.68■■□□□ 1.06
SS18-224ENST00000584083 KRT82Q9NSB4 513 aa21.68■■□□□ 1.06
SS18-224ENST00000584083 SPATA6Q9NWH7 488 aaPredicted RBP21.68■■□□□ 1.06
SS18-224ENST00000584083 GTSE1Q9NYZ3 720 aa21.68■■□□□ 1.06
SS18-224ENST00000584083 CTNND2Q9UQB3 1225 aa21.68■■□□□ 1.06
SS18-224ENST00000584083 HELZP42694 1942 aaKnown RBP21.67■■□□□ 1.06
SS18-224ENST00000584083 PPP1R3GB7ZBB8 358 aa21.67■■□□□ 1.06
SS18-224ENST00000584083 RTN3O95197 1032 aaPredicted RBP21.67■■□□□ 1.06
SS18-224ENST00000584083 YWHAQP27348 245 aa21.67■■□□□ 1.06
SS18-224ENST00000584083 MAGEA9P43362 315 aa21.67■■□□□ 1.06
SS18-224ENST00000584083 SOX9P48436 509 aa21.67■■□□□ 1.06
SS18-224ENST00000584083 PPP3CCP48454 512 aa21.67■■□□□ 1.06
SS18-224ENST00000584083 PDE6CP51160 858 aa21.67■■□□□ 1.06
SS18-224ENST00000584083 MLLT6P55198 1093 aaPredicted RBP21.67■■□□□ 1.06
SS18-224ENST00000584083 TNK2Q07912 1038 aa21.67■■□□□ 1.06
SS18-224ENST00000584083 CAMK4Q16566 473 aa21.67■■□□□ 1.06
SS18-224ENST00000584083 CCDC40Q4G0X9 1142 aa21.67■■□□□ 1.06
SS18-224ENST00000584083 C1orf210Q8IVY1 113 aa21.67■■□□□ 1.06
SS18-224ENST00000584083 CLDN23Q96B33 292 aa21.67■■□□□ 1.06
SS18-224ENST00000584083 MSANTD3Q96H12 275 aa21.67■■□□□ 1.06
SS18-224ENST00000584083 CEP63Q96MT8 703 aa21.67■■□□□ 1.06
SS18-224ENST00000584083 TWNKQ96RR1 684 aa21.67■■□□□ 1.06
SS18-224ENST00000584083 METTL14Q9HCE5 456 aaKnown RBP21.67■■□□□ 1.06
SS18-224ENST00000584083 GCNT4Q9P109 453 aa21.67■■□□□ 1.06
SS18-224ENST00000584083 BICDL2A1A5D9 508 aa21.66■■□□□ 1.06
SS18-224ENST00000584083 ZNF840PA6NDX5 716 aa21.66■■□□□ 1.06
SS18-224ENST00000584083 ADORA2BP29275 332 aa21.66■■□□□ 1.06
SS18-224ENST00000584083 ITPRIPL2Q3MIP1 535 aa21.66■■□□□ 1.06
SS18-224ENST00000584083 CBWD6Q4V339 395 aa21.66■■□□□ 1.06
SS18-224ENST00000584083 CBWD3Q5JTY5 395 aa21.66■■□□□ 1.06
SS18-224ENST00000584083 CBWD5Q5RIA9 395 aa21.66■■□□□ 1.06
SS18-224ENST00000584083 TTI2Q6NXR4 508 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms