RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 GOLGA8SH3BPF8 625 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 GOLGA8MH3BSY2 632 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 DIAPH2O60879 1101 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 NEK2P51955 445 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 PLCB4Q15147 1175 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 TMED2Q15363 201 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CFAP161Q6P656 301 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ANKS1BQ7Z6G8 1248 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 PORCNQ9H237 461 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 XPNPEP1Q9NQW7 623 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 KCND2Q9NZV8 630 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 AGTPBP1Q9UPW5 1226 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 UMODL1Q5DID0 1318 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 MGRN1O60291 552 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ANP32DO95626 131 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 AGTP01019 485 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 EDN1P05305 212 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 RARGP13631 454 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ANXA13P27216 316 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 MAPK4P31152 587 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 NCKAP1LP55160 1127 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 NCALDP61601 193 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CETN1Q12798 172 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 DRP2Q13474 957 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 LACTB2Q53H82 288 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CHST13Q8NET6 341 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SPDYE1Q8NFV5 336 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ART4Q93070 314 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 TMEM143Q96AN5 459 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ZNF668Q96K58 619 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 TGS1Q96RS0 853 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 HAPLN2Q9GZV7 340 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SLCO1B3Q9NPD5 702 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CROTQ9UKG9 612 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 DOCK1Q14185 1865 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 DOCK5Q9H7D0 1870 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 WDR91A4D1P6 747 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 CXCL11O14625 94 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 HNRNPDLO14979 420 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 DNAJC6O75061 913 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 MTHFD1P11586 935 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 STX2P32856 288 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 JAK3P52333 1124 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 SNAPC2Q13487 334 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 TMEM63BQ5T3F8 832 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 CEP68Q76N32 757 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 GSTA5Q7RTV2 222 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ERICH1Q86X53 443 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 FBXO16Q8IX29 292 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 C4orf33Q8N1A6 199 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 DDX1Q92499 740 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 SHC3Q92529 594 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 CD101Q93033 1021 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 GPRASP2Q96D09 838 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 NDFIP2Q9NV92 336 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 STK39Q9UEW8 545 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 PCYOX1Q9UHG3 505 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 GGA2Q9UJY4 613 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 CCL15-CCL14A0A0B4J2E2 113 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 SOWAHBA6NEL2 793 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 TRIM64A6NGJ6 449 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 TRIM64BA6NI03 449 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 TTLL13PA6NNM8 815 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 PODXLO00592 558 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 RALAP11233 206 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 TCF4P15884 667 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 OSBPP22059 807 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 YY1P25490 414 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 MASP1P48740 699 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 SEC13P55735 322 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 MGAT5Q09328 741 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 DNAJC3Q13217 504 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 PPIL2Q13356 520 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 CCL15Q16663 113 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 FASTKD5Q7L8L6 764 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 NIPA1Q7RTP0 329 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 RIOX2Q8IUF8 465 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 FAM9CQ8IZT9 166 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ESX1Q8N693 406 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 SMYD1Q8NB12 490 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ALG13Q9NP73 1137 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 RAB20Q9NX57 234 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 SLC12A4Q9UP95 1085 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 WDR37Q9Y2I8 494 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 NOSIPQ9Y314 301 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 USP15Q9Y4E8 981 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 KAT6AQ92794 2004 aa12.14□□□□□ -0.47
CDK5RAP3-231ENST00000584063 MIF4GDA9UHW6 222 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 M0QX08 132 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ATP2A1O14983 1001 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 KCNJ13O60928 360 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 DNAJC8O75937 253 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 PSAPP07602 524 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 HSPA8P11142 646 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 NLRP11P59045 1033 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 PRKCEQ02156 737 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 FASTKD3Q14CZ7 662 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 BBS9Q3SYG4 887 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 KRT39Q6A163 491 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 RASSF3Q86WH2 238 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms